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25 protocols using dichloromethane

1

Quantifying Polyhydroxyalkanoates via Spectrometry

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The PHA content was measured using the spectrometric method as suggested in Law and Slepecky (1960a (link)). The PHAs of the samples were extracted from the cells with dichloromethane (Carl Roth, Karlsruhe, Germany). Two milliliters of the chlorinated hydrocarbon is added to each previously lyophilized sample and the mixture was boiled in a water bath for 10 min. After cooling down to room temperature, cell pellets were centrifuged for 10 min at 3200×g and 4 °C (Allegra X-12R, Beckman Coulter, Brea, USA) and the supernatants were transferred to a 10-mL glass tube. Afterwards, the extraction step was repeated two times. The supernatants were then evaporated to obtain the extracted PHAs. After complete evaporation of the dichloromethane, samples were boiled with 2 mL of concentrated sulfuric acid (98%, Carl Roth, Kalrsruhe, Germany) in a water bath for 30 min. After cooling down to room temperature, 200 μL of the sample was transferred in a microtiter plate and measured in a spectrometer (Eon, BioTek, Winooksi, USA). Thereby, a spectrum was recorded between 200 and 800 nm using 5 nm slit. The lamp of the device provides monochromatic light in the visual and UV range. The maximum absorbance at 235 nm can be used to determine the amount of crotonic acid in the sample.
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2

Volatile Compound Profiling of Bacteria

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Bacteria were cultivated in 6 ml NB II overnight at 30°C and 170 rpm, and once OD600 = 0.5–1 was reached transferred into a 100 ml modified Erlenmeyer flask of the VOC-collection system (Kai et al., 2010 (link)). Volatile compounds of the headspace of three 24 h intervals (air flow 1.1 ml/min) were trapped on the absorbent SuperQ (50 mg, brand new SuperQ to avoid cross-contamination; Alltech, IL, USA). The trapped VOCs were eluted with dichloromethane (Carl Roth, Karlsruhe, Germany). Nonyl acetate (Carl Roth, Karlsruhe, Germany) was added as internal standard (stock solution 5 ng/10 μg), peak in the chromatogram corresponds to 5 ng.
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3

Cannabinoid Standardization and Analysis

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CBN (1 mg/mL in methanol, certified reference material), CBN-d3 (100 μg/mL in methanol, certified reference material), CBD (1 mg/mL in methanol, certified reference material), and CBD-d3 (100 μg/mL in methanol, certified reference material) were bought from Cerilliant; acetonitrile (HPLC gradient grade), methanol (HPLC gradient grade), n-hexane (HPLC grade), n-heptane (HPLC grade), and formic acid (98–100%) were obtained from VWR Chemicals; dichloromethane (HPLC grade) from Carl Roth, triethylamine from ACROS Organics, Fast Blue Salt B (FBS, dye content ~ 95%) from Sigma-Aldrich, Chromabond SiOH (1 ml/100 mg), Chromabond C18 ec (1 ml/ 100 mg) as well as TLC (thin-layer chromatography) plates (silica gel 60, ALUGRAM Xtra SIL G UV254 and octadecyl-modified silica, ALUGRAM RP-18 W/UV254) from Macherey-Nagel, TLC plates (silica gel 60 without fluorescent indicator on aluminum sheets), and HPTLC (high-performance thin-layer chromatography) plates (silica gel 60 F254 MS-grade for matrix-assisted laser desorption/ionization (MALDI) and silica gel 60 F254 on glass plates) were purchased from Merck KGaA and analytical sea sand from Grüssig GmbH. Distilled diethyl ether and acetone were produced with a rotary evaporator from BÜCHI.
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4

Multifunctional Polymer Nanoparticles for Bone Tissue Engineering

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Poly(vinyl alcohol) (PVA; MW = 30,000 g·mol−1; 100% hydrolyzed,), poly(ϵ-caprolactone) (PCL; MW = 80,000 g·mol−1), 2-(N-morpholino)ethanesulfonic acid (MES), 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC), N-hydroxysuccinimide (NHS), phosphate-buffered saline (PBS), succinic anhydride, dioctyl sulfosuccinate sodium salt (AOT), and ciprofloxacin (CF) were purchased from Sigma Aldrich, Steinheim, Germany. Gentamicin sulphate, 4-Dimethylaminopyridine (4-DMAP), ethanol, 2-propanol, acetone, and dichloromethane (DCM) were purchased from Roth (Karlsuhe, Germany). d-(Aspartic acid)6 oligomers (ASP) were synthesized on demand by GenScript (Leiden, The Netherlands). Tryptin Soy Agar (TSA) plates were purchased from Oxoid AG (Basel, Switzerland). CellTiter Blue® cell viability assay was purchased from Promega, Madison, WI, USA. Bone marrow-derived mesenchymal stem cells (BMSC) were isolated from human bone marrow donated by the Inselspital Bern. Osteoassay plates were acquired from Corning (Amsterdam, The Netherlands). The bacterial strains used were methicillin susceptible S. aureus JAR 890 (CCOS, Wädenswill, Switzerland) and E. coli O76:H51 (CCOS, Wädenswill, Switzerland).
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5

Sustained-Release Risperidone Depot Injection

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Expansorb DLG 75-7E, batch number C100010962, (Merck, Darmstadt, Germany) PVA 4-88 (Merck, Darmstadt, Germany) Risperidone 95+% (Activate Scientific, Shanghai, China), Pioneer MCT (middle chain triglycerides) batch number: 1132229 (Hansen & Rosenthal, Hamburg, Germany); isopropylmyristate Ph-Eur. batch number: 1407015-01, (Euro OTC Pharma GmbH, Bönen, Germany); dichloromethane 99.9% (Carl-Roth, Karlsruhe, Germany); hydroxystearic acid was a gift from Alberdingk Boley GmbH, (Krefeld, Germany). Risperdal Consta® 50 mg batch number: GCSK002, (Janssen-Cilag GmbH, Neuss, Germany); 2.5 mL GASTIGHT® syringe (Hamilton Germany GmbH, Planegg, Martinsried, Germany), syringe pump (Pump 11 Elite, Harvard Apparatus, Holliston, MA, USA).
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6

Analyzing Glucosinolate Breakdown Products

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For the determination of enzymatically formed breakdown products of the GLS in fresh plant tissues, benzonitrile (≥99.9%, Sigma-Aldrich Chemie GmbH) was added as an IST and catabolites were extracted with dichloromethane (Carl Roth GmbH; GC Ultra Grade) as described previously (Witzel et al., 2015 ). For the analysis of glucosinolate breakdown products in exudates, the total volume of each exudate (500ml) was extracted with 50ml of dichloromethane in a separating funnel. The separated dichloromethane layer was dried using anhydrous NaSO4 (VWR International GmbH, Darmstadt, Germany; ≥99%) and the aqueous phase was re-extracted twice using 25ml of dichloromethane. The combined dichloromethane extract was dried under nitrogen to 300 µl and subjected to GC-MS analysis as described above.
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7

Synthesis of 4-(bromomethyl)benzoic Acid Derivative

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Cotton wool, hydrochloric acid (37%, extra pure), sodium hydroxide (99%, p.a., ISO, in pellets), pyridine (99%, for synthesis) and dichloromethane (99.5%, for synthesis) were purchased from Carl Roth. Sulfuric acid (95%, RECTAPUR), 4-(bromomethyl)benzoic acid (97%, Alfa Aesar), p-toluenesulfonyl chloride (98%, Alfa Aesar) and ethanol (absolute, EMPLURAR ) were purchased from VWR International. N,N-Dimethylformamide (99.8%, Extra Dry over Molecular Sieves, AcroSeal®), Imidazole (99%), potassium bromide (IR spectroscopy grade) and Amberlite® MB-6113 (for ion chromatography, mixed resin) were purchased from Acros Organics.
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8

Analytical Protocol for β-Carotene Extraction

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β-Carotene (≥97.0%, UV) was purchased from Sigma-Aldrich (Darmstadt, Germany). 2-Hydroxypropyl-β-cyclodextrin (Cavasol W7 HP Pharma) was obtained from Ashland Industries Europe GmbH (Schaffhausen, Switzerland). Acetonitrile, dichloromethane, methanol, tetrahydrofuran, and ammonium acetate were purchased from Roth. n-Hexane, cyclohexane, and acetone were supplied from UAB “Eurochemicals” (Vilnius, Lithuania). Ethanol and dimethyl sulfoxide were obtained from Vilniaus degtine (Vilnius, Lithuania) and Honeywell Riedel-de-Haen, respectively.
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9

Preparation and Characterization of Chemical Compounds

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Ethyl acetate (EtOAc, analytical grade) was purchased from Grüssing (Filsum, Germany). Cyclohexane (synthesis grade) and MeCN (HPLC grade) were purchased from Roth (Karlsruhe, Germany) and Fisher Scientific (Schwerte, Germany), respectively. Dichloromethane was of analytical grade (Roth, Karlsruhe, Germany). Potato dextrose agar (PDA) was purchased from Sigma-Aldrich, Steinheim, Germany. Dimethyl sulfoxide (DMSO) of bioscience grade was purchased from Roth, Karlsruhe, Germany. Dulbecco’s modified Eagle’s medium (DMEM) with 4.5 g/L glucose, 100 U/mL penicillin, 100 μg/mL streptomycin, and 10% (v/v) fetal bovine serum (FBS) was purchased from Gibco, Thermo Fisher, Darmstadt, Germany.
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10

Synthesis of Epoxy Nanocomposites

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Bisphenol A diglycidyl ether (DGEBA), 1-(2-aminoethylamino)-2-propanol (AEAP), and Al2O3 nanoparticles (particle sizes: 20–30 nm; surface area: 180 m2·g−1) were purchased from ABCR (Karlsruhe, Germany). SiO2 nanoparticles (particle sizes: 5–15 nm; surface area: 590–690 m2·g−1) and hexamethyldisilazane (HMDS) were obtained from Sigma Aldrich (Vienna, Austria). Hexagonal BN nanoparticles MK-hBN-N70 (average size: 70 nm; surface area: 45 m2·g−1) were purchased from MK Impex Corporation (Missisauga, ON, Canada). The solvents toluene and dichloromethane were purchased from Carl Roth (Vienna, Austria) and VWR (Vienna, Austria), respectively. The release agent Chemlease R&B EZ (1116650226) was acquired from Chem Trend GmbH (Maisach-Gernlinden, Germany). All chemicals were used as received.
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