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6 protocols using anti n cadherin 66219 1 ig

1

Western Blot Analysis of Cell Lysates

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Cell lysates were separated by SDS-polyacrylamide gel (4%–10%) electrophoresis, and then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, Massachusetts, USA). The membranes were then blocked with 5% skimmed milk and incubated overnight at 4 °C with the following primary detection antibodies: anti-BIN1 (14647-1-AP, Proteintech, Rosemont, USA), anti-E-cadherin (60335-1-Ig, Proteintech), anti-N-cadherin (66219-1-Ig, Proteintech), and anti-GAPDH (ab8245, Abcam). The species-matched secondary antibodies were then incubated for 2 h at room temperature and the proteins were detected using BeyoECL Plus (Beyotime, Shanghai, China). Each experiment contained triplicate wells of each sample, and all experiments were repeated at least three times.
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2

Immunoprecipitation and Immunoblotting Assays

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Proteins from cells were incubated with antibody and precipitated with protein A/G-agarose beads. The immunoprecipitated proteins were subjected to SDS-PAGE. The immunoblotting assay was performed using the following antibodies: anti-N-cadherin (66219-1-Ig; Proteintech, Wuhan, China), anti-E-cadherin (60335-1-Ig; Proteintech), anti-MMP9 (10375-2-AP; Proteintech), anti-MMP2 (66366-1-Ig; Proteintech), anti-vimentin (60330-1-Ig; Protein tech), anti-PKM2 (A0540; ABclonal, Wuhan, China), anti-COX-2 (12282; CST, MA, United States), anti-ERK1/2 (sc-292838; Santa Cruz, CA, United States), anti-p-ERK1/2 (AP0472; ABclonal), anti-β-actin (RM2001; Ray, Beijing, China), and anti-α-tubulin (RM2007; Ray).
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3

Western Blot Analysis of Protein Expression

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For western blotting analysis, proteins were extracted by using RIPA lysis buffer (Beyotime, Shanghai, China). Proteins were added to 4–20% gels, subjected to 160 V to promote migration, and then transferred onto PVDF membranes (Millipore, Billerica, MA, USA). The membranes were blocked with 5% BSA for 1 h and incubated at 4 °C overnight with primary antibodies as follows: anti-LZTS2 (sc-514618, Santa Cruz Biotechnology, Dallas, Texas, USA), anti-β-catenin (GB11015, Servicebio, Wuhan, China), anti-phosphor-β-catenin (#4176, Cell Signaling Technology, Danvers, MA, USA), anti-E-cadherin (GB81868, Servicebio), anti-N-cadherin (66219-1-Ig, Proteintech, Rosemont, IL, USA), anti-Histone H3 (ab176842, Abcam, Cambridge, UK) and anti-GAPDH (GB11002, Servicebio). Then, the species-matched secondary antibodies were incubated for 2 h at room temperature. Then protein bands were developed by an ECL chemiluminescent substrate kit (Biosharp Life Sciences, Hefei, China). Band intensities were quantified using ImageQuant LAS 500 (GE, Boston, MA, USA). For evaluation of the expression of β-catenin located in the cytoplasm and nucleus, GAPDH and histone H3 were used as internal controls, respectively.
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4

Western Blot Analysis of Cellular Signaling

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After culture and treatments, cells were harvested and lysed in protein extraction reagent (78501, ThermoFisher) and mixed with 1% protease inhibitor mixture at 4 °C for 30 min. Protein samples (40 μg) were separated by SDS-PAGE and transferred to PVDF membranes. Next, the membranes were blocked with 10% non-fat milk for 1 h and incubated overnight at 4 °C with primary antibodies: anti-IDH3α (15909-1-AP, Proteintech, Chicago, IL, USA), anti-HIF-1α (ab51608, Abcam, Cambridge, UK), anti-E-cadherin (60335-1-Ig, Proteintech), anti-N-cadherin (66219-1-Ig, Proteintech), anti-Vimentin (ab8978, Abcam), anti-slug (12129-1-AP, Proteintech), anti-cGAS (15102, CST, Danvers, MA, USA), anti-sting (13647, CST), anti-phospho-sting (Ser366) (19781,CST), anti-TBK1 (38066, CST), anti-phospho-TBK1 (S172) (ab109272, Abcam), anti-IRF3(ab76409, Abcam), anti-phospho-IRF3(S386)(ab76493, Abcam), anti-p65 (ab32536, Abcam), anti-phospho-p65 (S536) (ab76302, Abcam), anti-PD-L1 (ab213524, Abcam), and β-tubulin (sc-8432, Proteintech). Finally, the membranes were incubated with HRP-conjugated secondary antibodies at room temperature for 1 h. Western blotting analysis was performed using a Bio-Rad chemiluminescence imager. Original blots can be found at Supplementary Figure S5.
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5

Protein Expression Analysis Protocol

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The specific procedures were conducted according to our previous study [22 ]. The primary immunoblotting antibodies used in this study were as follows: anti-GAPDH (10494–1-AP, Proteintech), anti-E-cadherin (20874–1-AP, Proteintech), anti-N-cadherin (66219–1-Ig), anti-PARP1 (13371–1-AP, Proteintech), anti-AKT (C67E7, Cell Signaling Technology), anti-pAKT (S473) (193H12, Cell Signaling Technology), and anti-pAKT(T308) (D25E6, Cell Signaling Technology). The antibodies of YTHDF2, LHPP, METTL3 and NKX3–1 was same with IHC. GAPDH was the internal reference.
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6

TGF-β1 Signaling Pathway Modulation

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Toluene 2,4-diisocyanate (TDI) was purchased from Junsei Chemical Co. (Tokyo, Japan). Triton X-100, sodium dodecyl sulfate (SDS), phosphatase inhibitor cocktail 2/3, protease inhibitor cocktail, 4,6-diamidino-2-phenylindole dihydrochloride (DAPI), and dimethyl sulfoxide (DMSO) were obtained from Sigma-Aldrich Chemical (St. Louis, MO, USA). SB-431542 was purchased from MedChemExpress USA (Middlesex, NJ, USA). Antibodies against anti-TGF-β1(21898-1), anti-E-cadherin (60335-1-Ig), and anti-N-cadherin (66219-1-Ig) were purchased from Proteintech (Rosemont, IL, USA). Antibodies targeting anti-p-SMAD2/3 (8828S), anti-SMAD2/3(8685S), anti-α-SMA (19245S), and anti-mouse Alexa 488 (4408S) were purchased from Cell Signaling Technology (Beverly, MA, USA). The fibronectin antibody (MA5-11981) was purchased from Thermo Fisher Scientific (Waltham, MA, USA). Anti-vimentin (sc-6260), anti-β-actin (sc-47778), HRP-conjugated anti-rabbit IgG (sc-2357), anti-rabbit CFL 488 (sc-516248), and HRP-conjugated anti-mouse IgG (sc-516102) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, Dallas, CA, USA).
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