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9 protocols using ab18206

1

Murine Model of Hepatic Fibrosis

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Male C57BL6/J mice weighing 20–25 g were housed at the Ethics Committee for Animal Experiments of the First Hospital of China Medical University under a 12 h:12 h light/dark cycle with a constant temperature (22 ± 1 °C) and free access to food and water. All animal experiments were performed according to the National Institutes of Health guide for the care and use of Laboratory animals, and were approved by the Animal Care and Use Committee of the First Hospital of China Medical University.
The detailed information of antibodies are as follows: Anti-ILEI antibody (ab72182, Abcam, Cambridge, U.K.), Anti-α‐SMA antibody (ab5694, Abcam), Anti-vimentin antibody (ab137321, Abcam), Anti-E‐cadherin antibody (ab133597, Abcam), Anti-p‐Akt antibody (ab18206, Abcam), Anti-Akt antibody (ab126811, Abcam), Anti-p‐ERK antibody (ab223500, Abcam), Anti- ERK antibody (ab17942, Abcam), Anti-collagen Ι antibody (ab34710, Abcam), Anti-LIFR antibody (sc-659, Santa cruz, Dallas, U.S.A.),Anti-collagen ΙII antibody (WL03186,wanleibio,Shenyang, China), Anti-β‐actin antibody (WL01845,wanleibio).
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2

Protein Expression Analysis of VEGF, PI3K/Akt Pathway

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The protein contents of vascular endothelial growth factor A (VEGFA), PI3K, p-PI3K, Akt and p-Akt were evaluated by western blot and the detailed protocol as described previously (Song et al. 2019 ). In brief, 20 µg of protein isolated from cells were subjected to sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) and membrane transfer, followed by blocking in 5% non-fat milk. After that, the membranes were incubated with primary antibodies at 4 °C overnight, and then incubated with horseradish peroxidase (HRP)-conjugated IgG (ab205718; 1:10,000; Abcam, Cambridge, MA, USA) for 2 h at room temperature. The antibodies were as follows: anti-VEGFA (ab214424; 1:1000; Abcam), anti-cleaved caspase-3 (ab184787; 1:1000, Abcam), anti-PI3K (ab154598; 1:1000; Abcam), anti-p-PI3K (#4228; 1:600; Cell Signalling Technology, Boston, MA, USA), anti-Akt (ab8805; 1:1000; Abcam), anti-p-Akt (ab18206; 1:1000; Abcam) and anti-β-actin (ab8226; 1:1000; Abcam). Enhanced chemiluminescence reagent (ECL; Sigma) was applied to detect the protein bands. For in vitro cell samples, tests were performed with three biological replicates and three technical replicates. For animal tissue samples, tests were performed with six biological replicates and three technical replicates.
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3

Western Blotting for Cellular Signaling

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Western blotting was performed with the SDS-PAGE electrophoresis system. Adherent cells or adipose tissue extracts were prepared and transferred to PVDF membranes. The following primary antibodies were used: anti-GAPDH (ap0063, Bioworld), anti-Col15α1 (ab150463, Abcam), anti-Caspase-9 (ab32539, Abcam), anti-Cleaved Caspase-9 (bs7070, Bioworld), anti-Caspase-3 (Bs6428, Bioworld), anti-Cleaved Caspase-3 (bs7004, Bioworld), anti-Bcl2 (bs1511, Bioworld), anti-Bax (ab32503, Abcam), anti-AMPK (ab32047, Abcam), anti-pAMPK (ab133448, Abcam), anti-mTOR (ab87540, Abcam), anti-pmTORC1Ser2448 (ab109268, Abcam), anti-Akt (ab8805, Abcam), anti-pAktSer473 (ab18206, Abcam), anti-S6K1 (ab32529, Abcam), anti-pERK1/2 (ab201015, Abcam), anti-ERK1/2 (ab17942, Abcam), anti-pS6K1Thr389 (ab2571, Abcam), anti-Collagen I (ab34710, Abcam), anti-Collagen VI (ab6588, Abcam), anti-Fibronectin (ab2413, Abcam), anti-MMP2 (ab92536, Abcam), anti-MMP9 (ab38898, Abcam), anti-TIMP1 (WL02342, Wanleibio), anti-TIMP2 (ab180630, Abcam), anti-FGFR1 (ab31324, Abcam), anti-pFGFR1Tyr653/Tyr654 (GTX133526, GeneTex), anti-TGFβ1 (WL03092, Wanleibio). Horseradish peroxidase anti-rabbit or anti-goat (Sigma–Aldrich) were used as secondary antibodies.
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4

Quantitative Protein Analysis by Western Blot

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A total of 4 × 105 cells were mixed with 1 ml RIPA solution (Sangon) to extract protein. Following denaturing in boiled water for 5 min, 10% SDS-PAGE gel was used to perform electrophoresis. PVDF membranes were used to perform gel transfer and blocking was performed for 2 h at room temperature in 5% non-fat milk. Blotting was performed using rabbit p-AKT (1:1200, ab18206, Abcam), AKT (1:1200, ab126811, Abcam), PI3K (1:1200, ab182651, Abcam), PI3K (1:1200, ab5451, Abcam), cytochrome c (1: 1200, ab90529, Abcam), and PI3K (1:1200, ab9485, Abcam) primary antibodies (overnight at 4°C) and goat IgG-HRP secondary antibody (1:800, MBS435036, MyBioSource). ECL (Sangon) was used to develop signal. Gray values were processed using Image J V1.6 software. Three independent replicates were set for each experiment.
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5

Regulation of PTPN13 by miR-30e in Lung Adenocarcinoma

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Human LAC tissues were collected from The Third Affiliated Hospital of Kunming Medical University. LAC cell lines (BEAS‐2B, A549. NCI‐2228, NCI‐H23, NCI‐H2085, NCI‐H2087. NCI‐H1993, NCI‐H522 and NCI‐H1975) used in our experiments were from Chinese Academy of Science Shanghai Cell Bank. Lentivirus‐mediated miR‐30e overexpression, miR‐30e shRNA and PTPN13 overexpression vectors, negative control vector (NC) and virion‐packaging elements were from Genechem (Shanghai, China); The primary antibodies of PTPN13 (rabbit monoclonal antibody, ab198882), β‐actin (mouse monoclonal antibody, ab8226), EGFR (rabbit monoclonal antibody, ab52894), AKT(rabbit polyclonal antibody, ab126811), p‐AKT(rabbit polyclonal antibody, ab18206) were from Abcam (Cambridge, MA, USA). The horseradish peroxidase‐linked second goat antibody was from Sigma Corporation (St Louis, MO, USA). Dulbecco's modified Eagle medium (DMEM) and foetal bovine serum (FBS) were from Thermo Fisher Scientific Inc (Waltham, MA, USA); 3‐(4,5)‐dimethylthiahiazo (‐z‐yl)‐3,5‐ di‐phenytetrazoliumromide (MTT) was from Dingguo biology (Shanghai, China); TRIzol reagent and lipofectamine 2000 were from Invitrogen (Carlsbad, CA, USA); M‐MLV Reverse Transcriptase was from Promega (Madison, WI, USA); SYBR Green Master Mixture was from Takara (Otsu, Japan). ECL‐PLUS/Kit was from GE Healthcare (Piscataway, NJ, USA).
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6

Oxidative Stress Signaling in Aorta and HUVEC

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Isolated thoracic aortic tissues or cultured HUVECs were lysed in commercially purchased RIPA lysis buffer (P0013B, Beyotime, Shanghai, China) spiked with 1 mmol/L phenylmethanesulfonyl fluoride (ST506, Beyotime, Shanghai, China) to obtain protein products. The antibodies against the following proteins were used: PXDN (1 μg/mL, ABS1675, Merck, Frankfurter, Germany), RAGE (0.3 μg/mL, ab37647, Abcam, Cambridge, UK), NOX2 (0.25 μg/mL, ab80508, Abcam, Cambridge, UK), NOX1 (0.5 μg/mL, ab131088 and ab121009, Abcam, Cambridge, UK), NOX4 (0.33 μg/mL, ab154244, Abcam, Cambridge, UK), 3-chlorotyrosine (0.1 μg/mL, 3-Cl-Tyr, HP5002, Hycult biotech, Uden, Netherlands), 4-hydroxynonenal (0.43 μg/mL, 4-HNE, ab46545, Abcam, Cambridge, UK), Akt (0.5 μg/mL, SAB4500797, Sigma-Aldrich, USA), p-Akt (0.143 μg/mL, ab18206, Abcam, Cambridge, UK), eNOS (0.25 μg/mL, 61029, BD, Biosciences, NJ, USA) and p-eNOS (0.056 μg/mL dilution, Ser1177, MA5-14957, Invitrogen, CA, USA). Expression of the protein GAPDH (0.5 μg/mL, SAB1405848, Sigma-Aldrich, MO, USA) was used for data normalization. PVDF membranes were incubated with a horseradish peroxidase linked secondary antibody and bands were visualized using gel documentation system (Bio-Rad).
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7

In Vitro Evaluation of Pioglitazone

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Pioglitazone hydrochloride was purchased from Jiangsu Hengrui Medicine Co., Ltd. (H20040267, Lianyungang, China). First Strand cDNA Synthesis Kits were bought from Promega Corporation (Cat #: #1622, Madison, USA). The SYBR Premix was provided by Applied Biosystems (Cat #: 4367659, Foster, USA). The primers were designed and synthesized by Sangon Biotech (Shanghai, China). Antibodies to GAPDH, PI3Kp85, Akt, p-Akt (ser473), GSK3β were purchased from Abcam, Inc. (Cat #: ab8245, ab189403, ab8805, ab18206 and ab32391, Cambridge, UK). The antibodies to IRS-1 and Glut4 were purchased from Cell Signaling Technology (Cat #: #3194 and #2213, Beverly, USA). Anti-Rabbit IgG-HRP and Anti-mouse IgG-HRP were from Santa Cruz (Cat #: sc-2030 and sc-200, California, USA).
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8

Western Blot Analysis of Cell Signaling Proteins

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Cells were lysed in lysis buffer (30 mM Tris‐HCl, 150 mM NaCl, 1% NP‐40, and 0.1% SDS; pH 7.4) supplemented with a protease inhibitor cocktail (Roche). The BCA Protein Quantitation Kit (Genescript) was used to determine protein concentration. Proteins were separated using 10% SDS‐PAGE and blotted electrophoretically onto polyvinylidene difluoride (PVDF; Immobilon) membranes of 0.45 µm pore size. Membranes were blocked with 5% bovine serum albumin (BSA) in phosphate‐buffered saline containing 0.1% tween‐20 (PBST) for 1 hour at room temperature, followed by incubation with primary antibody overnight at 4°C: anti‐p21 antibody (ab227443, Abcam), anti‐p16 antibody (ab151303, Abcam), anti‐bcl‐2 antibody (ab59348, Abcam), anti‐bax antibody (ab53154, Abcam), anti‐PTEN antibody (ab31392, Abcam), anti‐Akt antibody (ab8805, Abcam), anti‐pAkt antibody (ab18206, Abcam), and anti‐GAPDH antibody (ab9485, Abcam). HRP‐linked goat anti‐rabbit IgG secondary antibodies (Amersham) were incubated with the membranes for 1 hour at room temperature in PBST containing 5% BSA, followed by chemiluminescent detection. A C‐DiGit Blot Scanner and Super Signal West Femto Maximum Sensitivity Substrate Kit (provided by Thermo) were used to detect bound antibodies.
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9

Lipid Metabolism Regulation via PXDN and FoxO1

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High-glucose Dulbecco’s Modified Eagle’s Medium (DMEM), trypsin-EDTA solution, fetal bovine serum, penicillin, and streptomycin were purchased from Gibco (Thermofisher Scientific, USA). Rabbit anti-PXDN antibody was obtained from Millipore (USA). Sodium palmitate (p9767), rabbit anti-AKT antibody (sab4500797), rabbit anti-p62 antibody (P0067), rabbit anti-LC3 antibody (L8918) were purchased from Sigma-Aldrich (USA). Antibody against phospho-AKT (S473) (ab18206) was purchased from Abcam (UK), while rabbit anti-FoxO1 antibody (CST2880S) and primary rabbit antibody for phospho-FoxO1 (Ser256) (CST9461S) were obtained from Cell Signaling Technology (USA). DC661 (dimeric chloroquine) was purchased from selleck (USA). Glucose assay reagent (F006) was purchase from Nanjing jiancheng bioengineering Institute (Nanjing, China). Reagents for western blot, IgG, and protein A + G Agarose were purchase from Beyotime Institute of Biotechnology (Jiangsu, China). LIVE/DEAD viability kit was obtained from Invitrogen (Thermofisher Scientific, USA). And small interfering RNAs (siRNAs) for PXDN and FoxO1 and negative controls (sequences were listed in Table S1), as well as transfection kit was purchase from RiboBio Co Ltd (Guangzhou, China).
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