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936 protocols using ab8226

1

Western Blot Analysis of Cellular Proteins

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RIPA lysate was used to prepare tissue homogenate to extract protein and NP-40 lysate to obtain cell protein. The protein concentration was measured using the BCA protein kit (TaKaRa, Otsu, Japan, T9300A). Protein was degenerated in sodium dodecyl sulfate (SDS) buffer, followed by separating on SDS-polyacrylamide electrophoresis (PAGE) gel using electrophoresis. After that, they were transferred onto polyvinylidene difluoride (PVDF, Millipore, USA, IPVH00010) membrane and incubated with primary antibody actin (Abcam, USA, ab8226, 1 : 400), BAX (Abcam, USA, ab32503, 1 : 200), Bcl-2 (Abcam, USA, ab182858, 1 : 200), caspase-3 (Abcam, USA, ab32351, 1 : 1000), Cbfα-1 (Abcam, USA, ab113203,1 : 200), OPN (Abcam, USA, ab228748, 1 : 200), SM-α (Abcam, USA, ab7817, 1 : 500), Akt (Abcam, USA, ab8805, 1 : 200), p-Akt (Abcam, USA, ab38449, 1 : 100), ERK1/2 (Abcam, USA, ab184699,1 : 1000), p-ERK1/2 (Abcam, USA, ab278538,1 : 1000), and β-actin (Abcam, USA, ab8226, 1 : 1000) overnight at 4°C. Next, they were incubated with horseradish peroxidase- (HRP-) conjugated secondary antibodies IgG (Abcam, USA, ab150077, goat anti-rabbit, 1 : 5000) at room temperature for 45 min. After the membrane was washed in TBST, the blot was visualized by the enhanced chemiluminescence ECL kit (Thermo Fisher Scientific, NY, USA).
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2

Western Blot Analysis of Synaptic Proteins

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The tissue samples were lysed with RIPA lysate containing protease inhibitor and phosphatase inhibitor (Beyotime). The protein concentration was determined using a DC protein analysis kit (500-0111; Bio-Rad, Hercules, CA, USA) at 750 nm. The proteins were separated by sodium dodecyl sulfate polyacrylamide gels and transferred to polyvinylidene fluoride membrane. The membrane was then blocked with 5% bovine serum albumin for 1 h and probed with rabbit anti-human antibodies (1 : 1000) overnight at 4°C. Next, the membrane was reprobed with secondary antibody (1 : 5000). Luminata Western horseradish peroxidase (HRP) substrate (Millipore, Billerica, MA, USA) and Kodak XBT-1 negatives were adopted for color development. The band was quantified using Bio-Rad Quantity One software, normalized to actin level. All results were normalized with blank control values of 100%.
The antibodies used were as follows: GABAB receptor (Invitrogen, #PA1-32248), NR2B (Abcam, Cambridge, UK; ab81271), PKC (Abcam, ab31), CaMKII (Abcam, ab171095), phosphorylation (p)-mitogen-activated protein kinase (ERK1/2) (Abcam, ab54230), p-CREB (Abcam, ab32096), and beta-actin antibody (Abcam, ab8226). Secondary antibody was mouse anti-rabbit immunoglobulin G (IgG) light chain (Abcam, ab8226).
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3

Western blot analysis of IGF1R pathway

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After extracting total proteins with RIPA Lysis Buffer (Beyotime), the same amount of protein was separated by 10% SDS-PAGE gel and then transferred onto PVDF membranes (Invitrogen). The membrane was incubated with anti-IGF1R (1:1,000, ab263907, Abcam), anti-p-AKT (1:25,000, ab81283, Abcam), anti-AKT (1:500, ab8805, Abcam), anti-cyclin D1 (1:200, ab16663, Abcam), anti-GLUT1 (1:2,500, ab14683, Abcam), anti-YTHDC2 (1:1,000, ab220160, Abcam), or anti-β-actin (1:5,000, ab8226, Abcam) followed by hatching with Goat anti-Rabbit (1:50,000, ab205718, Abcam) or Goat-anti-Mouse (1:5,000, ab205719, Abcam). Protein signals were visualized with the BeyoECL Plus Kit (Beyotime).
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4

Western Blot Analysis of Apoptosis and Autophagy

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Protein samples were extracted from myocardial tissue and H9C2 cells. Protein concentrations were determined using the BCA method to ensure consistent loading of each sample. Proteins were separated using SDS-PAGE, and then transferred to 0.45-μm PVDF membranes. After blocking with skim milk for 1 hour, membranes were incubated with antibodies against Bcl-2 (ab32124), Bax (ab53154), p53 (ab32389), LC3B(ab63817), SQSTM1/62 (ab91526), ATG5 (ab53154), Beclin1 (ab62557), or β-actin (ab8226) (antibodies purchased from Abcam Biotechnology, USA) at 4 °C overnight. After labeling with secondary antibodies, the target protein was observed using enhanced chemical luminescence.
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5

Quantifying Hippocampal Fndc5/Irisin Levels

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The protein level of Fndc5/irisin in hippocampus were detected using Western blotting. The detailed proposal was according our previous study [32 (link)]. The primary antibody: anti-Fndc5/irisin (1:1000, Abcam, #ab131390), anti-β-actin (1:20,000, Abcam, #ab8226).
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6

Western Blot Analysis of Cellular Proteins

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Proteins were extracted from tissues or cells in RIPA assay and protein concentration was determined by a BCA protein assays kit (Thermo Scientific). Protein were separated into 10% SDS‐PAGE and transferred to polyvinylidene difluoride (PVDF) membranes (Millipore Corp.). The PVDF membranes were incubated by ORMDL3 (ab211522, 1:1000, Abcam), p‐PERK (3179, 1:1000, Cell Signaling Technology, Inc.), PERK (5683, 1:1000, Cell Signaling Technology, Inc.), p‐eiF2α (ab32157, 1:1000, Abcam), eiF2α (ab169528, 1:1000, Abcam), ATF4 (ab184909, 1:1000, Abcam), HSPA5 (ab21685, 1:1000, Abcam), GPX4 (ab125066, 1:1000, Abcam) and β‐actin (ab8226, 1:10000, Abcam) at 4°C overnight. PVDF membranes were incubated with horseradish peroxidase‐conjugated secondary antibodies (A0208, A0216, Beyotime, 1:5000) for 2 h. The signal was tested with the chemiluminescence system (Amersham Pharmacia).
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7

Western Blot Analysis of Extracellular Matrix Proteins

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Total protein was extracted from the cells using the M-PER mammalian protein extraction reagent (Pierce, Rockford, IL, USA). Equal quantities of protein (20 µg per lane) estimated by the bicinchoninic acid protein assay kit (Pierce) were loaded onto 11% SDS-PAGE and transferred onto nitrocellulose membranes. The blots were probed with a monoclonal antibodies against human collagen I (1:200, Cat#ab138492, Abcam, UK), α-SMA (1:500, Cat#ab5694, Abcam), tissue inhibitor of metalloproteinase (TIMP)1 (1:600, Cat#ab211926, Abcam), Lox (1:250, Cat#ab174316, Abcam), and β-actin (1:1200, Cat#ab8226, Abcam), followed by secondary horseradish peroxidase-conjugated antirabbit antibody (1:10,000, Cat#ab97080, Abcam). After washing, the bands were detected by chemiluminescence and imaged with X-ray films. β-Actin was used as an endogenous reference for normalization.
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8

Western Blot Analysis of Bladder Cancer Cells

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Bladder cancer cells were washed with ice‐cold phosphate buffered saline (PBS), lysed in RIPA lysis buffer supplemented with protease and phosphatase inhibitors, and the concentration was measured by BCA Protein Assay Kit (Invitrogen).
18 (link),
19 (link) For western blot analysis, 30 μg of proteins were loaded onto 10% SDS‐PAGE and transferred to PVDF membranes. Next, the membranes were blocked with 5% milk for 1 h at room temperature, and incubated with anti‐FLRT2 (#ab154023, Abcam), anti‐ACSL4 (#ab155282, Abcam) or anti‐β‐actin (#ab8226, Abcam) overnight at 4°C. On the next day, the sample was then washed thrice with TBST for 10 min each time. The membrane was removed and incubated with the peroxidaseconjugated secondary antibody (ProteinTech Group) at 37°C for 2 h. Finally, ECL (Biosharp Life Sciences) colour was developed with β‐actin as an internal reference to analyse the protein expression level on the membrane and visualized with the by the chemiluminescence system (ChemiDocTM Touch; Bio‐Rad).
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9

Western Blotting for Synaptic Proteins

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To perform Western blotting,43 (link) total protein was extracted and quantified (Pierce BCA Protein Assay Kit, ThermoScientific) after cell lysis in RIPA buffer (ThermoScientific) with cOmplete ULTRA mini protease inhibitor (Roche, Mannheim, Germany) and PhosSTOP phosphatase inhibitor (Roche). Total protein (20 μg) was separated on a Bolt 4–12% Bis-Tris Plus Gel (Life Technologies) and subsequently transferred to a nitrocellulose membrane using an iBlot2 dry blotting system (ThermoScientific). Membranes were blocked at room temperature for 1–4 h (Rockland Immunochemicals, VWR International, Arlington Heights, IL, USA); primary antibodies (rabbit anti-Synapsin1, EMD-Millipore AB1543P, 1:1500; mouse anti-PSD-95, Neuromab, 1:1500; rabbit anti-GTF2I, Abcam (Cambridge, UK) ab129025, 1:250; mouse anti-β-actin, Abcam ab8226, 1:10,000) in blocking buffer incubated, shaking, overnight at 4°C. Membranes underwent three 5-min washes with PBS +0.1% Tween 20, followed by the application of secondary antibodies (IRDye 680RD and IRDye 800CW, 1:5000 in blocking buffer) incubated at room temperature, shaking and protected from light, for 1 h. Membranes underwent three more washes, after which an Odyssey CLx infrared imaging system (LiCOR Biosciences, Lincoln, NE, USA) was used to detect proteins; signal intensity was normalized relative to intensity quantification of β-actin.
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10

Protein Secretion in Mesenchymal Stem Cells

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The protein secretion of PI3 kinase p85 (PI3K), phospho-PI3K (p-PI3K), heme oxygenase 1 (HO-1) and indoleamine 2,3-dioxygenase (IDO) in cultured mesenchymal stem cells according to the experimental procedures were detected by western blot assay.
Adherent cells were scraped from the culture dishes, and total protein was extracted from the cell pellet with RIPA lysis buffer (89,900, Thermo Scientific). The proteins were separated through a 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride membranes (ISEQ00010, Merck Millipore). The membrane was blocked and probed with primary antibodies overnight, including PI3 kinase p85 (PI3K, ab133595, abcam), phospho-PI3K (p-PI3K, ab182651, abcam), heme oxygenase 1 (HO-1, ab68477, abcam), indoleamine 2,3-dioxygenase (IDO, ab277522, abcam) and β-Actin (ab8226, abcam) at 1:1,000 dilutions. The membrane was then incubated with the secondary antibodies (115-035-003, Jackson). The signals were scanned for the densitometry and the final blots were quantified with ImageJ Version 2.1.0/1.53c software.
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