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110 protocols using millicell cm

1

Monitoring Circadian Rhythms in Per1-luc Transgenic Mice

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Per1::luc Tg mice of the C57BL strain, in which it was possible to monitor the circadian rhythm, were kindly provided by H. Tei (Kanazawa University) [23 (link)]. Then, we raised male and female heterozygous Tg and wild‐type mice from 6 weeks to 12 months of age under LD 12 : 12 h cycles (Light ON 8:00, Light OFF 20:00) at 22 °C. All animal studies described were kept in SPF condition and conducted in accordance with the guidelines of the Committee on Animal Care and Use of the Toyohashi University of Technology.
First, coronal sections of SCN slices (300–400‐µm thick) from wild‐type and Tg mice were cut using a micro‐slicer (Dosaka, Sakyo‐ku, Kyoto, Japan) and incubated on a culture membrane (Millicell‐CM; Millipore, Burlington, MA, USA) at a diameter of 35 mm in a petri dish containing 1.2 mL culture medium (serum‐free DMEM; Invitrogen). The culture medium was supplemented with 10 mm HEPES (pH 7.2; Invitrogen), B27 (2%; Life Technologies, Carlsbad, CA, USA), 0.1 mm luciferin (Promega), and antibiotics (25 U·mL−1 penicillin and 25 mg·mL−1 streptomycin; Invitrogen). After, the overall health of the cells in both culture dishes and SCN slices was monitored by staining with Trypan Blue (TB; in this assay, dead cells were stained blue).
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2

Organotypic Hippocampal Slice Cultures

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Animal care and experimental procedures were performed in agreement with the German law on the use of laboratory animals (animal welfare act; TierSchG; §4 par 3) and approved by the animal welfare officer of Goethe-University, Faculty of medicine. Organotypic entorhino-hippocampal slice cultures (OTCs; 300 μm thickness) were prepared from 4–5 day old (P 4–5) Sprague Dawley rats of either sex using the interface method30 . Briefly, brains were sliced horizontally into 300 μm thick sections using a vibratome (Leica VT1000S) at low speed (0.10–0.15 mm/s) and high vibration frequency (80–90 Hz). The hippocampi with attached entorhinal cortices were dissected with scalpels and transferred onto sterile membrane culture inserts (Millicell-CM, Millipore; 0.4 μm pore size, 30 mm diameter). These were placed into pre-incubated six-well plates containing slice culture incubation medium (1 ml per well) that consisted of 42% MEM, 25% Basal Eagle Medium containing Earle’s salts, 25% heat-inactivated normal horse serum, 0.65% glucose, 25 mM HEPES, 0.1 mg/ml streptomycin, 100 U/ml penicillin, 0.15% sodium bicarbonate, and 2 mM glutamax, adjusted to pH 7.30. Cultures were kept in vitro in a humidified incubator (95% air, 5% CO2, at 35 °C), and the medium was changed every 2 to 3 days until further processing.
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3

Transferrin Uptake Assay in SNpc

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The transferrin (Tf) uptake essay was modified from that previously described50 (link). Syt11-carrying lentivirus was unilaterally injected into the SNpc of TH-GFP mice (provided by Minmin Luo, National Institute of Biological Sciences, China). The SNpc-containing slices were placed on Millicell® CM (0.4 μm pore size; Millipore) culture plates and incubated with DMEM supplemented with 10% FBS at 37 °C in a humidified incubator (5% CO2). After 4-h incubation, the slices were serum-starved by replacing the medium with serum-free DMEM containing 20 mM HEPES and 1 mg ml−1 BSA for 45 min at 37 °C. They were then incubated with serum-free medium containing 25 μg ml−1 human Tf conjugated to Alexa Fluor 594 (Invitrogen) for 30 min at 37 °C. The unbound Tf was washed off with ice-cold PBS containing 0.3 mM CaCl2 and 0.3 mM MgCl2. The slices were subsequently fixed in an ice-cold solution of 4% formaldehyde and mounted on slides with 50% glycerol. A ×42 oil lens on a Zeiss 710 inverted confocal microscope was used to scan z-stack of 1-μm optical sections. Identical settings were applied to all samples in each experiment. The average fluorescence intensity of the Tf signal in GFP-positive cell bodies in the SNpc was calculated with ImageJ.
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4

Organotypic Hippocampal Slice Culture

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The hippocampi for preparation of 400-μm thick organotypic slices with the preserved tissue organization were isolated from the brains of 7-day-old Wistar rats (n = 18), according to the protocol described previously [51 (link)]. The procedure was approved by the IV Local Ethics Committee on Animal Care and Use (Ministry of Science and Higher Education). The slices, obtained by cutting the chilled hippocampi by use of a McIlwain apparatus, were placed on Millicell-CM (Millipore) membranes and cultured initially in DMEM medium (Gibco) containing the following supplements: 25% horse serum (Gibco), 25% HBSS (Gibco), 2 mmol/l L glucose (Sigma), 5-mg/ml HEPES (Gibco), B27 supplement (Gibco), and an antibacterial–antimycotic solution (Sigma). On the day following establishing the ex vivo culture, the serum concentration in the culture medium was gradually decreased and therefore from the 5 day in vitro (DIV) onwards, the slices were kept for the following 7 days in serum-free media and in normoxic gas conditions (5% O2, 5% CO2).
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5

Entorhino-hippocampal Tissue Culture Protocol

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Entorhino-hippocampal tissue cultures were prepared from mouse brains of C57Bl6/J mice at postnatal days 3–5 according to previously published protocols (Prang et al., 2003 (link); Del Turco and Deller, 2007 (link); Del Turco et al., 2019 (link)). For brain dissection, an ice-cold preparation medium [Minimal essential medium (MEM, Gibco) containing 2 mM Glutamax (Gibco), pH 7.3] was used. Slices (300–350 μm) were cut using a Leica vibratome (VT1200S, Leica). Organotypic tissue cultures were maintained on porous-MEMbrane filter inserts (Millicell-CM, Millipore) and incubated in a humidified atmosphere with 5% CO2 at 35°C. Medium for cultivation contained 42% MEM, 25% basal medium eagle (Gibco), 25% heat-inactivated normal horse serum (Gibco), 2.5% HEPES buffer solution (Invitrogen), 0.15% bicarbonate (Invitrogen), 0.675% glucose (Sigma–Aldrich), 0.1 mg/ml streptomycin (Sigma–Aldrich), 100 U/ml penicillin (Sigma–Aldrich) and 2 mM Glutamax. The pH was adjusted to 7.3 and the medium was replaced every 2–3 days. Organotypic tissue cultures were incubated for up to 42 days in vitro (DIV).
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6

Organotypic Hippocampal Slice Culture from Rats

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Organotypic hippocampal slices were prepared from Wistar rats of either sex at postnatal day 5–7. Briefly, dissected hippocampi54 (link) were cut into 400 μm slices with a tissue chopper and placed on a porous membrane (Millicell CM, Millipore). Cultures were maintained at 37 °C, 5% CO2 in a medium containing (for 500 ml): 394 ml Minimal Essential Medium (Sigma M7278), 100 ml heat inactivated donor horse serum (H1138 Sigma), 1 mM l-glutamine (Gibco 25030-024), 0.01 mg ml−1 insulin (Sigma I6634), 1.45 ml 5 M NaCl (S5150 Sigma), 2 mM MgSO4 (Fluka 63126), 1.44 mM CaCl2 (Fluka 21114), 0.00125% ascorbic acid (Fluka 11140), 13 mM d-glucose (Fluka 49152). No antibiotics were added to the culture medium. The medium was partially exchanged (60–70%) twice per week. Wistar rats were housed and bred at the University Medical Center Hamburg-Eppendorf (UKE). All procedures were performed in compliance with German law (Tierschutzgesetz der Bundesrepublik Deutschland, TierSchG) and according to the guidelines of Directive 2010/63/EU. Protocols were approved by the Behörde für Justiz und Verbraucherschutz (BJV) - Lebensmittelsicherheit und Veterinärwesen, Hamburg.
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7

Organotypic Hippocampal Slice Culture Preparation

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Organotypic hippocampal slice cultures were prepared and grown with modifications to the interface culture method50 (link) from P6–8 Sprague-Dawley rats. Three hundred-µm-thick, isolated hippocampal brain slices were sectioned using a Leica VT1200S vibratome in ice-cold sterile slicing solution consisting (in mM) of Sucrose 105, NaCl 50, KCl 2.5, NaH2PO4 1.25, MgCl2 7, CaCl2 0.5, Ascorbic acid 1.3, Sodium pyruvate 3, NaHCO3 26, and Glucose 10. Following washes in culture media consisting of 50% Minimal Essential Media, 25% Horse Serum, 25% Hanks Balanced Salt solution, 0.5% L-Glutamine, 28 mM Glucose, and the antibiotics penicillin (100 U/ml) and streptomycin (100 µg/ml), three to four slices were transferred onto each 0.4-µm pore membrane insert (Millicell-CM, Millipore, UK), kept at 37 °C in 5% CO2 and fed by medium exchange every 2–3 days for a maximum of 21 days in vitro (DIV). The slices were transferred to a microscope recording chamber with the recording artificial cerebrospinal fluid solution containing (in mM): NaCl 125, NaHCO3 26, KCl 2.5, NaH2PO4 1.25, MgSO4 1.3, CaCl2 2, and glucose 16 (osmolarity 300–305 mOsm), continuously bubbled with 95% O2/5% CO2. Recordings were carried out at 33–35 °C, with addition of 10 μM NBQX and 50 μM AP5 to reduce the potential for plasticity effects influencing synaptic properties during prolonged recordings.
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8

P10 Cit-k KO Mouse Brain Slice Culture

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250 µm thick coronal slices of P10 Cit-k KO mouse forebrain and cerebellum were cut using a Tissue Chopper. The slices were placed on Millicell-CM culture plate inserts (Millipore, Billerica, MS, USA) in a medium composed of 50% basal medium with Earle’s salts, 25% Hanks’ buffered salt solution, 25% horse serum, 5 mg/ml glucose, 0.5 nM triiodothyronine (T3; Sigma–Aldrich, Saint Louis, MS, USA), 60 µg/ml NAC. After 7 days in vitro (DIV), slices were either fixed for 30 min at RT with 4% PFA in 0.1 M PB for subsequent anti-MBP immunolabelings (see above) or pooled (3 millicells/sample) and lysed for the subsequent protein extraction.
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9

Ovarian Explant Culture with Steroid Hormones

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Ovaries dissected at 17.5 dpc were placed in culture. Ovaries were cultured in 4-well culture plates in drops of media on 0.4 μM floating filters (Millicell- CM; Millipore Corp., Bedford, MA) in 0.4 ml DMEM-Ham’s F-12 media supplemented with penicillin-streptomycin, 5X ITS-X (Life Technologies, Inc., Grand Island, NY), 0.1% BSA, 0.1% albumax, and 0.05 mg/ml L-ascorbic acid. E2 and P4 (Sigma Chemical Co., St. Louis, MO) were dissolved in dimethylsulfoxide (DMSO) at a concentration of 0.1 M and then added to culture media to achieve the desired final concentration. DMSO was added to media at the same percent as the chemical to serve as vehicle control. Ovaries were placed in culture and exposed daily to E2, P4 or both hormones at 10−6 M or DMSO alone (n = 5 ovaries per treatment group). Ovaries were divided randomly among the treatment groups. The ovaries from control and treatment were fixed in Bouin’s fixative and histologically processed.
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10

Live Imaging of Electroporated Mouse Brains

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Ex vivo electroporation and live imaging were performed as previously described 29 (link), 30 (link). Ex vivo electroporation was performed on injected mouse embryos’ heads similarly to in vivo electroporation. The electrical parameters were the following: 50V, 50 msec length, 5 pulses, 1 sec interval. Following electroporation, brains were dissected in L15 (PAA Laboratories) and transferred into liquid 3% low melting agarose (Sigma) and incubated on ice. Embedded brains were cut coronally (300 μm) with a vibratome (Leica), and slices were transferred onto sterilized culture plate inserts (0.4-μm pore size; Millicell-CM, Millipore) and cultivated in complete Neurobasal containing Neurobasal medium (Gibco) supplemented with 1% B27, 1% N2, 1% glutamine, 1% penicillin/streptomycin and 1% fungizone.
Thirty hours after ex vivo electroporation, GFP was imaged in live brain slices using 900nm multiphoton excitation (Spectraphysics MaiTai DeepSee) with a Leica SP5 confocal scanner on a DM6000 CFS upright microscope. A 10x,0.4NA (dry) objective was used and reflected excitation collected with a non descanned PMT through a 525/50 filter (Semrock).
Movies were analysed using the Fiji software 34 (link). Three dimensional sample drift over time was corrected with the Correct 3D drift plug-in and cell movement was analysed using the Manual Tracking plug-in.
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