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Autoflex 3 spectrometer

Manufactured by Bruker
Sourced in Germany

The Autoflex III spectrometer is a laboratory equipment product manufactured by Bruker. It is designed to perform analytical tasks related to spectroscopy. The core function of the Autoflex III is to analyze the interaction between matter and electromagnetic radiation, providing information about the chemical composition and structure of samples.

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4 protocols using autoflex 3 spectrometer

1

Expression and Purification of Isotopically Labeled K2hPg Variant

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A triple variant of human K2hPg (C4G/E56 D/L72Y) that displays ~5-fold enhanced affinity. without loss of selectivity for PAM, as well as the inability to aggregate through disulfide bonding, compared to WT-K2hPg, was expressed in Pichia pastoris GS115 cells as described in detail previously (Nilsen et al., 1997 ; Wang et al., 2010a (link); Wang et al., 2010b (link)). The tighter binding of this variant allowed separation of K2hPg from unbound components during purification. For uniform 15N- and 15N/13C-K2hPg, the medium employed was (15 NH4)2SO4 (99%, Cambridge Isotope Laboratories)/13C-glucose (99%; Isotec)/13C-methanol (99%, Isotec). The K2hPg contained seven exogenous residues at the N-terminus of K2hPg (enumerated as −7 to −1) as a necessary result of the construction of the expression plasmid (Nilsen et al., 1997 ). The final construct is as follows:
NH2Y7VEFSEE[C+1K2hPgC78]AA80
The Y−7VEF is from the polylinker site of the plasmid and SEE represents the linker between K1hPg and K2hPg in hPg numbering begins at C+ and concludes at C 78The integrity of all labeled and unlabeled proteins and peptides was determined by MALDI-TOF mass spectrometry on an Autoflex III spectrometer (Bruker Daltonics). For all uniformly-labeled 15N- and 13C/15N-peptides, single mass peaks were obtained of the correct molecular weights, indicating complete incorporation of the heavy isotopes.
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2

Synthesis and Characterization of Fusidic Acid Derivatives

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One-dimensional (1H and 13C) and two-dimensional (COSY, NOESY, HSQC, and HMBC) NMR spectra were recorded on a Bruker Avance II 500 HD Ascend spectrometer (500.17 MHz for 1H and 125.78 MHz for 13C) (Bruker, Rheinstetten, Germany). All the experiments were set up with standard Bruker pulse sequences. Chemical shifts are given in ppm relative to TMS as the internal standard. Mass spectra were measured by the MALDI TOF/TOF method on a Bruker Autoflex III spectrometer in positive ion mode. 3-(4-Hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid was used as a matrix. The elemental analyses were carried out on a Carlo Erba 1106 analyzer. The melting points were determined on PHMK 80/2617 apparatus. The reaction progress was monitored by TLC using Sorbfil plates (PTSHAF-V, Sorbopolymer, Russia), which were visualized by 10% sulfuric acid and subsequent heating at 100–120 °C for 2–3 min. Column chromatography was performed on KSK silica gel (100–200 µm, Sorbopolymer, Russia). Fusidic acid of 99.3% purity was purchased from Hangzhou Hyper Chemicals Limited. 3,11-Dioxo derivatives of fusidic acid 1 and 2 were synthesized according to the known procedure [19 (link)].
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3

Characterization of DSPE-PEG2000-DTPA Structure

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The structure of DSPE-PEG2000-DTPA was characterized by MS, UV spectroscopy, and by FTIR spectroscopy using a Spectrum One FT-IR, (Pelkin Elmer, Massachusetts, USA) spectrometer. MS was performed on a matrix-assisted laser desorption/ionization time-of-flight (MALDI-ToF) Autoflex III spectrometer (Bruker Daltonics, Bremen, Germany). Sample (0.5 µL) were spotted onto an AnchorChip 600/384 (BrukerDaltonics, Bremen, Germany) target microtiter plate (MTP), mixed with a saturated solution of α-cyano-4-hydroxycinnamic acid (0.5 µL), and allowed to crystallize at room temperature. The MS spectra were acquired in the reflector/positive mode with external calibration, using Peptide Calibration Standard II as reference (BrukerDaltonics, Bremen, Germany). MS data analysis was performed by using the FlexAnalysis software (Bruker Daltonics).
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4

Comprehensive Materials Characterization Protocol

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Matrix-assisted laser desorption ionization time-of-flight (MALDI–TOF) mass spectra were collected on a Bruker Daltonics Autoflex III spectrometer using dithranol as the matrix. Elemental analysis was carried out using a YANACO CHN coder MT-6. Thermogravimetric analysis (TGA) was performed using a Hitachi High-Tech Science TG/DTA7300 with a heating rate of 10 °C min−1 under N2 atmosphere. UV–vis absorption spectra were recorded on a JASCO V-670Y spectrometer. Photoelectron yield spectra were recorded on a Riken-Keiki AC-2 ultraviolet photoelectron spectrometer. The thickness of photoactive layers was measured using a Bruker DektakXT system.
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