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8 protocols using clindamycin

1

Antimicrobial Susceptibility Profiling of Isolates

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The antimicrobial susceptibility was determined on Mueller-Hinton agar plates (Becton Dickinson, Franklin Lakes, NJ, USA) by the disk diffusion method and interpreted according to the EUCAST [47 ]. The following antimicrobial agents were tested: oxacillin, cefoxitin, gentamicin, erythromycin, clindamycin, tetracycline, ciprofloxacin, amoxicillin/clavulanic acid (Bio-Rad, Marnes la Coquette, France) and penicillin G (Oxoid, Basingstoke, UK). The inducible resistance to macrolide-lincosamide-streptogramin B (MLSB) was detected by disk diffusion method with clindamycin (2 μg) and erythromycin (15 μg) disks positioned 15–26 mm apart [47 ]. MIC for vancomycin was determined by E-tests, in line with the manufacturer’s instructions (AB Biodisc, Solna, Sweden).
Resistance to methicillin was first identified using cefoxitin (30 µg) and oxacillin (1 µg) disks, and then confirmed by the detection of PBP2a protein (OXOID ™ PBP2 ’Latex Agglutination Test Kit, Basingstoke, UK).
Multidrug resistance (MDR) was defined as a resistance to three or more classes of antimicrobials.
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2

Antibiotic Susceptibility of Enterococci

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A bacterial suspension of density equivalent to a MacFarland of 0.5 was used to inoculate an MH agar plate using a sterile swab. An Etest® (Biomérieux, Marcy-l’Etoile, France) containing ciprofloxacin was loaded onto the agar and incubated overnight at 37 °C before MIC determination. In parallel, an antibiogram of Enterococci was performed by disk diffusion method using the following molecules (Bio-Rad, Hercules, CA, USA): ampicillin (2 µg), imipenem (10 µg), norfloxacin (10 µg), rifampicin (5 µg), erythromycin (10 µg), clindamycin (2 µg), quinuspristin-dalfopristin (15 µg), tigecycline (15 µg), linezolid (10 µg), levofloxacin (5 µg), gentamicin (30 µg), streptomycin (300 µg), vancomycin (5 µg), teicoplanin (30 µg), nitrofurantoin (100 µg), fosfomycin (200 µg). The interpretations were carried out according to the European Committee on Antimicrobial Susceptibility Testing (EUCAST) guidelines (https://www.eucast.org/clinical_breakpoints, 2022).
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3

Antibiotic Susceptibility Testing of Isolated Strains

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The susceptibility of isolated strains was tested with 11 antibiotics belonging to the different classes (β-lactamines, cyclin, aminoglycosides, macrolides, quinolones, glycopeptides, phenicoles, and sulfa) by the disk diffusion method on Mueller-Hinton agar (Conda-Pronadisa, Madrid, Spain), according to the standards [9 ,10 ] recommended by the WHO. The antibiotic discs (BioRad, Marnes-la-Coquette, France) used are as follows: Penicillin (10 UI), cefoxitin (30 µg), tetracycline (30 µg), neomycin (30 µg), gentamicin (10 µg), erythromycin (15 µg), clindamycin (2 µg), ofloxacin (5 µg), vancomycin (30 µg), chloramphenicol (30 µg), and trimethoprim + sulfamethoxazole (1.25/23.73 µg).
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4

Antimicrobial Susceptibility Profiling of Bacterial Isolates

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The antimicrobial susceptibility was performed by the disk diffusion method according to the European Committee on Antimicrobial Susceptibility Testing (EUCAST) [9 ]. Fifteen antimicrobial agents on Mueller-Hinton agar plates (Becton Dickinson, Franklin Lakes, NJ, USA) were tested: oxacillin, cefoxitin, gentamicin, erythromycin, clindamycin, tetracycline, chloramphenicol, ciprofloxacin, trimethoprim/sulfamethoxazole, fusidic acid, linezolid, rifampicin, tigecycline and vancomycin (Bio-Rad, Marnes la Coquette, France) and penicillin G (Oxoid, Basingstoke, England). The phenotype of resistance to macrolide-lincosamide-streptogramin B was tested and interpreted according to the EUCAST. vancomycin susceptibility was determined with E-test method (bioMerieux, Marcy-l’Etoile, France). Multidrug resistance (MDR) was defined as a resistance to three or more classes of antibiotics.
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Antimicrobial Susceptibility Profiling of MRSA

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Susceptibility to cefoxitin, chloramphenicol, ciprofloxacin, clindamycin, fusidic acid, erythromycin, gentamicin, kanamycin, linezolid, mupirocin, quinupristin-dalfopristin, penicillin, rifampin, tetracycline, tobramycin and trimethoprim/sulfamethoxazole (BioRad, USA) was performed by disk diffusion method and to vancomycin and teicoplanic by Etest (bioMérieux, France) in accordance to the European Committee on Antimicrobial Susceptibility Testing (EUCAST) recommendation (http://www.eucast.org). Multidrug resistance (MDR) was defined as resistance of MRSA to three or more district antimicrobial classes in addition to beta-lactams.
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6

MRSA Antibiotic Susceptibility Profiling

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The MRSA isolates were tested for antibiotic susceptibility by disc diffusion test using the following discs: chloramphenicol (30 μg), ciprofloxacin (5 μg), clindamycin (2 μg), fusidic acid (10 μg), gentamycin (10 μg), erythromycin (15 μg), imipenem (10 μg), rifampicin (5 μg), tetracycline (30 μg), trimethoprim/sulfamethoxazole (1.25 + 23.75 μg) and vancomycin (30 μg) (BioRad, USA). The rates of susceptibility and resistance of isolated MRSA strains to the used antibiotic discs were detected.
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7

Antibiotic Susceptibility Profiling

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Susceptibility to penicillin, cefoxitin, erythromycin, clindamycin, fusidic acid, gentamicin, ciprofloxacin, levofloxacin, rifampin, tetracycline and trimethoprim/sulfamethoxazole (BioRad, USA) was determined by the disk diffusion method and to vancomycin and teicoplanin by gradient E test (bioMérieux) in accordance with the EUCAST recommendation (http://www.eucast.org).
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8

Bacterial Antibiotic Susceptibility Testing

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Fresh bacterial cultures were streaked in triplicate on base blood agar plates with 5% (v/v) horse blood and incubated at 30°C for 48 h. Blood agar plates were checked for β-haemolysis, α-haemolysis, or γ-haemolysis [35 (link)]. Susceptibility to antibiotics was determined by using the disk diffusion method on Muller Hinton agar (MHA) plates supplemented with 0.2% glucose and 0.4% yeast extract. The antibiotics used were ampicillin (AM; 10 μg), chloramphenicol (C; 30 μg), erythromycin (E; 15 μg), tetracycline (TE; 30 μg), clindamycin (CL; 2 μg), rifampicin (RA; 5 μg), and vancomycin (VAN; 30 μg) (Bio-Rad Laboratories, Hercules, CA, USA). MH plates were overlaid with soft MHA (containing 0.7% agar) inoculated at 0.5 McFarland with fresh bacterial culture. After 24 h of incubation at 37°C, the inhibition zone diameters around discs were measured, and the LAB isolates were categorized, according to the standard criteria [36 ], as resistant (R), intermediate resistant (I), or sensitive (S).
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