The largest database of trusted experimental protocols

154 protocols using em 900

1

Ultrastructural Analysis of Electroporated Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The ultrastructural analysis after electropermeabilization alone and with DOX, was carried out by transmission electron microscope Zeiss EM 900. Final DOX concentration in a cell culture was 1.7 µM. Immediately after pulsation the cells were fixed for 30 min in 2.5% (vol/vol) glutaraldehyde and 0.1 M phosphate buffer (pH 7.4). After post-fixation in 1% (wt/vol) osmium tetroxide, cells were dehydrated through a graded series of alcohol and propylene oxide, and embedded in Epon. The Epon blocks were cut on a Reihert Ultracut E ultramicrotome. Ultrathin sections were contrasted with uranyl acetate and lead citrate according to the standard method [36] (link) and examined with a TEM Zeiss EM 900 (Carl Zeiss, Oberkochen, Germany).
+ Open protocol
+ Expand
2

Extracellular Vesicle Isolation and Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Extracellular vesicles were precipitated from 1ml serum using an isolation kit (miRCURY Exosome Isolation Kit, Qiagen, Venlo, Netherlands) as previously described (19 (link)) followed by extraction of cell-free RNA. For qPCR, an EV isolation and RNA extraction were performed from a second 1 ml serum aliquot. Particle concentration and size distribution were evaluated by Nanoparticle Tracking Analysis on a ZetaView PMX 110 (Particle Metrix, Meerbusch, Germany) and visualized by transmission electron microscopy. Following the Shapiro-Wilk normality test, statistical significance of particle tracking analysis data were evaluated by ordinary one-way ANOVA followed by Tukey’s multiple comparison test using Graphpad Prism (version 8.3.1) with a significance level of p ≤ 0.05. Particle concentration and size were reported as mean values ± standard deviation. Additionally, precipitated vesicles were visualized after negative staining with 4% uranyl acetate by transmission electron microscopy using a Zeiss EM900 (Carl Zeiss Microscopy GmbH, Jena, Germany) with a wide-angle dual speed 2KCCD camera at 80 kV.
+ Open protocol
+ Expand
3

Transmission Electron Microscopy of uEVs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Five μl of each uEV preparation were left to adhere onto formvar carbon coated grids (Nickel Grid 200 mesh; Electron Microscopy Sciences, USA) for five minutes followed by five minutes of negative staining with 2% aqueous uranyl acetate. Excess liquids were blotted. Total grid preparation was performed at room temperature. Images were acquired of air-dried grids on the same day at 80 kV using the Zeiss EM 900 instrument (Zeiss, Germany).
We have submitted all relevant data of our uEV experiments to the EV-TRACK knowledgebase (EV-TRACK ID: EV190007) [38 (link)].
+ Open protocol
+ Expand
4

Electron Microscopy Visualization of Extracellular Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
EVs were prepared for electron microscopy as described previously [36 (link)] with few modifications: Purified EVs were fixed with an equal amount of 4% PFA. A small volume (5–7 µL) of this suspension was transferred to a formvar/carbon-coated meshed copper grid (Ted Pella Inc., Redding, CA, USA) and air-dried for 20 min. The grids were washed with sterile-filtered PBS and fixed for 5 min with 1% glutaraldehyde. After 8 washing steps (2 min each) with distilled water, the sample was incubated with 1% uranyl acetate for 5 min and then transferred to 2% methylcellulose supplemented with 4% uranyl acetate (ratio 9:1) and incubated for 10 min on ice. Excess fluid was removed, and the grid was air-dried for up to 10 min. Images were taken with a Zeiss EM 900 (Zeiss, Jena, Germany) at 80 kV equipped with a 2k slow-scan CCD camera (TRS-STAR GmbH, Stutensee, Germany).
+ Open protocol
+ Expand
5

Characterization of FA-DEX-VBL-SPION Nanocomposite

Check if the same lab product or an alternative is used in the 5 most similar protocols
The size and morphological features of the obtained FA-DEX-VBL-SPION nanocomposite were estimated using TEM (Zeiss EM900, Carl Zeiss AG, Jena, Germany) and SEM (Hitachi S-3000 SEM, Tokyo, Japan) at a voltage of 30.0 kV and 30 mA. Zeta potential and dynamic light scattering (DLS) (Nano S, Malvern, UK) were performed after resuspension in ultrapure water and dilution to an appropriate concentration. FTIR spectra were recorded on a Thermo Nicolet 6700 instrument (AEM, Madison WI, USA) within the range of 400–4000 cm−1. Moreover, VSM (Lakeshore 7404, LakeShore, MI, USA) was performed to evaluate the magnetic properties of the particles.
+ Open protocol
+ Expand
6

Sublethal Exposure of Daphnia to nZnO

Check if the same lab product or an alternative is used in the 5 most similar protocols
A nano zinc oxide dispersion (20 wt.% in H2O) was purchased from Sigma (Sigma‐Aldrich, Louis, MO, USA). The nanoparticles were mostly spherical with an average size less than 50 nm (characterized by a transmission electron microscope, Zeiss EM900, Carl Zeiss, Oberkochen, Germany). A stock solution of 5 × 103 mg/L Zn was prepared by sonication in an ultrasonic bath (Elmasonic S40, Elma®, Germany) for 30 min and stored at 4°C under darkness. Each time, a test solution was made, and the stock solution was ultrasonicated for 30 min at 20 kHz with a maximum power output of 400 W to eliminate aggregates. A sublethal exposure concentration of nZnO (86 µg/L Zn) was used. This concentration corresponds to 10% of the EC50, 48 hr immobilization for D. magna neonates based on a pilot range‐finding experiment. The EC50, 48 hr immobilization is defined as the concentration at which half of the Daphnia individuals were not moving anymore after 48 hr of exposure. This concentration is similar to chronic EC50 values of nZnO for D. magna reproduction (Adam et al., 2014) and is environmentally relevant as the estimated nZnO concentrations in UK waterbodies go up to 100 μg/L (Boxall, Tiede, & Chaudhry, 2007).
+ Open protocol
+ Expand
7

Ultrastructural Analysis of Liver Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Liver samples were quickly removed, and small fragments were fixed by immersion in 2.5% glutaraldehyde in 0.13 M Millonig buffer (pH 7.2-7.4) at 4°C for 4 h, rinsed, post-fixed with 1% osmium tetroxide at 4°C for 2 h, washed, dehydrated through graded concentrations of alcohol, and embedded in Epon. Semithin sections (1 μm) were stained with 1% Toluidine Blue. Ultrathin sections were stained with uranyl acetate for 7 min and lead citrate for 2 min, coated with carbon, and observed with a Zeiss EM 900 (Carl Zeiss, Oberkochen, Germany) electron microscope operating at 80 kV.
+ Open protocol
+ Expand
8

TEM Analysis of AuNP Internalization in BeWo Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
TEM was conducted to investigate AuNP internalization in BeWo cells. Therefore, cells were cultivated on inserts for 3 days as described above and treated with 50 µg/mL Au-4-COONa or 25 µg/mL Au-3-PEG for 24 h at 37 °C and 5% CO2. Cells were detached from 11 inserts per condition (without NPs, Au-3-PEG, Au-4-COONa) using 0.5% Trypsin–EDTA, pelleted by centrifugation (200 g, 5 min) and sucked up into a capillary tube (Leica-Microsystems). Cells enriched in the capillaries were immediately fixed in 3% glutaraldehyde in 0.1 M sodium cacodylate buffer and washed in 0.2 M sodium cacodylate buffer. After a post-fixation step in 2% osmium tetroxide in 0.1 M sodium cacodylate buffer, samples were dehydrated through a graded ethanol series followed by acetone and finally embedded in Epon resin (Sigma-Aldrich, Buchs, Switzerland). Ultrathin sections were contrasted with 2% uranyl acetate and lead citrate (Reynolds 1963) before imaged in a Zeiss EM 900 (Carl Zeiss Microscopy GmbH, Germany) at 80 kV.
+ Open protocol
+ Expand
9

Transmission Electron Microscopy of EVs

Check if the same lab product or an alternative is used in the 5 most similar protocols
EVs were fixed in 2% paraformaldehyde and adsorbed onto formvar/carbon-coated 200-mesh nickel grids (Electron Microscopy Sciences) for 15 min. Grids were then washed with PBS, fixed in 2.5% glutaraldehyde for 5 min and washed with milliQ water. After performing negative staining with 2% uranyl acetate for 1 min, grids were washed again and air-dried overnight. Images were acquired on a Zeiss EM900 (Carl Zeiss Microscopy GmbH) with a wide-angle dual-speed 2K-CCD camera at 80 kV.
+ Open protocol
+ Expand
10

Embryonic Body Wall Microscopic Examination

Check if the same lab product or an alternative is used in the 5 most similar protocols
For light and electron microscopic examination, the embryonic body wall with limb buds (including differentiated muscle tissue) was fixed in modified Karnovsky fixative (1% paraformaldehyde [PFA] and 1% glutaraldehyde, in a 0.1 M phosphate buffer pH 7.2) for 24 h at 4 °C. The material was repeatedly rinsed with the same buffer and was postfixed for 2 h in a 1:1 mixture of osmium tetroxide-potassium ferricyanide (OsO4-K3Fe(CN)6). Following rinsing in the phosphate buffer, the material was dehydrated, first in a graded alcohol series and then in acetone, and was then embedded in epoxy resin Epon 812 (Sigma-Aldrich) (Luft 1961 (link)). The Epon blocks were cut on Leica Ultracut UCT (Leica, Wetzlar, Germany). Semithin sections (0.6 μm) were collected on glass slides and were stained with methylene blue in a 1% borax solution. The stained material was examined under an Olympus BX60 light microscope (Olympus). The ultrathin sections were collected on 200-mesh copper grids and were stained with uranyl acetate and lead citrate according to the standard protocol (Reynolds 1963 (link)), before being examined under the transmission electron microscope (TEM), Zeiss EM 900 (Carl Zeiss AG, Oberkochen, Germany; 80 kV).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!