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3 protocols using anti c ebpα sc 61x

1

Establishment of ChREBP and SREBP1a Overexpression Models

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A triple T7 (3×T7) double StrepII tag was N-terminally subcloned into retroviral vector pMSCVhyg to generate pMSCVhyg-3xT7 using a pTAG1-hygroTK-N-term 3xT7 double StrepII tag (Brown et al. 2017 (link)) as a template. Constitutive active form of mouse ChREBP or nuclear form of mouse SREBP1a was PCR-amplified using full-length clones as templates (Addgene 39235 and 32017) and was subcloned into pMSCVhyg-3xT7 to generate pMSCVhyg-3xT7-CA-ChREBP or pMSCVhyg-3xT7-nSREBP1a. All plasmids were confirmed by DNA sequencing. Anti-MED1 (A300-793A) and anti-MED12 (A300-774A) were from Bethyl Laboratories. Anti-FASN (no. 3810), anti-SCD1 (no. 2794), and anti-T7 (no. 132469) were from Cell Signaling Technology. Anti-C/EBPα (sc-61X) and anti-PPARγ (sc-7196X) were from Santa Cruz Biotechnology. Anti-H3K27ac (ab4729), anti-GFP (ab290), anti-S5P Pol II (ab5131), and anti-S2P Pol II (ab5095) were from Abcam. Anti-β-Actin (A1978) and (Z)-4-hydroxytamoxifen (4OHT) (H7904) were from Sigma.
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2

Antibody Characterization for Epigenetic Research

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The following antibodies were used in this study. Anti-C/EBPα (sc-61X, lot: G1112), anti-C/EBPβ (sc-150X, lot: L2910), anti-PPARγ (sc-7196X, lot: H1512), anti-p300 (sc-585X, lot: E2209) were from Santa Cruz Biotechnology (Dallas, TX, USA). Anti-CBP (7389S, lot: 1) was from Cell Signaling Technology (Danvers, MA, USA). Anti-MED1/TRAP220 (A300-793A, lot: 2), anti-RbBP5 (AA300-109A), anti-Menin (A300-105A) were from Bethyl Laboratories (Montgomery, TX, USA). Anti-EBF2 (AF7006, lot: CEUA0113081) was from R&D Systems (Minneapolis, MN, USA). Anti-CTCF (07-729, lot: 2054523), Anti-Pol II (17-672, lot: 2015592), anti-H3K4me3 (07-473, lot: 1974075) and Anti-H3K27me3 (07-449, lot: DAM1387952) were from Millipore (Billerica, MA, USA). Anti-H3K4me1 (ab8895, lot: GR61280-1), anti-H3K4me2 (ab7766, lot: GR102810-1), anti-H3K9me2 (ab1220, lot: 957002), anti-H3K27ac (ab4729, lot: GR81163-1), anti-H3K36me3 (ab9050, lot: 947436) were from Abcam (Cambridge, MA, USA). Anti-UTX was described previously (21 (link)). Anti-MLL4 and anti-SET1A were described previously (22 ).
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3

Generating Retroviral Vector with 3xT7-CA-ChREBP

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Triple T7 (3xT7) double StrepII tag was N-terminally subcloned into retroviral vector pMSCVhyg to generate pMSCVhyg-3xT7 using pTAG1-hygroTK-N-term 3xT7 double StrepII tag (gift from Rob Klose) 37 (link) as a template. Constitutive active form of mouse ChREBP was subcloned into pMSCVhyg-3xT7 to generate pMSCVhyg-3xT7-CA-ChREBP using full length clone as templates (Addgene #39235). All plasmids were confirmed by DNA sequencing. Anti-MED1 (A300-793A) and anti-MED12 (A300-774A) were from Bethyl Laboratories. Anti-FASN (#3810), anti-SCD1(#2794) and anti-T7 (#132469) were from Cell Signaling Technology. Anti-C/EBPα (sc-61X) and anti-PPARγ (sc-7196X) were from Santa Cruz Biotechnology. Anti-H3K27ac (ab4729), anti-GFP (ab290), anti-S5P Pol II (ab5131) and anti-S2P Pol II (ab5095) were from Abcam. Anti-β-Actin (A1978) and (Z)-4-hydroxytamoxifen (4OHT) (H7904) were from Sigma.
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