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9 protocols using p mtor ser2448

1

Rapamycin Effects on PROX1 and MTOR Signaling

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Cells (2 × 105) were plated in 60 mm dishes, treated with the indicated concentrations of rapamycin for 0~48 h, and then lysed using RIPA buffer (50 mM Tris-HCl [pH 7.4], 150 mM NaCl, 1% Nonidet P-40, 0.1% sodium dodecyl sulfate [SDS], and 0.5% sodium deoxycholate) containing protease and phosphatase inhibitors (Sigma-Aldrich, San Diego, CA, USA). Proteins were quantified using a Bradford Protein Assay kit (Pierce Biotechnology, Rockford, IL, USA). For Western blot assay, 20 μg of proteins was separated by 10% SDS polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride (PVDF) membranes (GE HealthCare, Hatfield, UK), which were then treated with anti-PROX1 antibody [25 (link)], anti-phospho-MTOR (p-MTOR, ser-2448) antibody (sc-101738, Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-MTOR antibody (Ab-2448, Cusabio, Houston, TX, USA), anti-β-actin antibody (sc-47778, Santa Cruz Biotechnology, CA), appropriate secondary antibodies, and enhanced chemiluminescence detection reagent (Amersham Pharmacia Biotech, Piscataway, NJ, USA).
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2

Hippocampal Protein Expression Analysis

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Experiments were conducted as previously described.33 The harvested hippocampal tissues were homogenized using lysis buffer supplemented with protease and phosphatase inhibitors on ice. Equal quantities of the proteins (40 μg/well) were separated by SDS‐PAGE and transferred onto a polyvinylidene fluoride membrane (EMD Millipore). The membranes were incubated at 4°C overnight with primary antibodies against the following proteins: mTOR (1:1000, Abcam), p‐mTOR (Ser2448, 1:1000, Santa Cruz Biotechnology, Inc.), p‐Tau (Ser396, 1:500, Abcam), LC3 (1:500, Cell Signaling Technology), Beclin‐1 (1:1000, Abcam), P62 (1:1000, Cell Signaling), cleaved caspase‐3 (1:500, Cell Signaling), Bax (1:1000, Cell Signaling), and Bcl‐2 (Cell Signaling), as well as β‐actin (Cell Signaling), which was used as the internal reference protein. The membranes were then incubated with the corresponding secondary antibodies (1:500, Cell Signaling). After that, the blots were developed with an enhanced chemiluminescence reagent (Pierce) and detected by an X‐ray film (XBT‐1, Eastman Kodak Company). The band intensity was quantified by densitometric analysis using the Image J software (NIH). Relative protein expression levels were obtained by normalizing to β‐actin.
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3

Western Blot Analysis of Protein Signaling

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Cells were lysed using RIPA lysis buffer (Biosharp, Beijing, China) with a protease inhibitor cocktail (Cell Signaling Technology, Boston, MA, USA). Total soluble protein was electrophoresed from 8% to 12% on sodium dodecyl sulfate (SDS)-polyacrylamide gels and transferred onto a polyvinylidene fluoride (PVDF) membrane (Millipore, Burlington, MA, USA). After blocking with 5% albumin from bovine serum (BSA) or skimmed milk for 1 h at room temperature, the blots were probed with primary antibodies to GLUT1 (dilution 1:1000, ABclonal, Wuhan, China), B-cell lymphoma-2 (Bcl-2, dilution 1:5000, Proteintech, Rosemont, IL, USA), BCL2-Associated X (Bax, dilution 1:1000, Proteintech, Rosemont, IL, USA), p-Akt (Ser473), total Akt (dilution 1:1000, ABclonal, Wuhan, China), p-mTOR (Ser2448) or total mTOR (dilution 1:1000, Santacruz Biotechnology, Dallas, TX, USA) and kept overnight at 4 °C, followed by incubation with horseradish peroxidase (HRP)-labeled secondary antibodies (Biofly, Chengdu, China) for 1 h at room temperature. After washing 3 times with 1% TBST, the bands were visualized using an efficient chemiluminescence (ECL) kit (Millipore, Burlington, MA, USA). β-actin (Sigma, Saint Louis, MO, USA) was used as the loading control.
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4

Western Blot Analysis of Protein Samples

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Protein samples were dissolved in RIPA buffer complemented with Phenylmethanesulfonyl fluoride (Beyotime Biotechnology, Shanghai, China). The concentrations of extracted proteins were measured using BCA kit (Beyotime Biotechnology, Shanghai, China). Equivalent amounts of total protein extract were separated on 10% SDS-PAGE gels (90 V for 30 min and 120 V for 60 min) and transferred to polyvinylidene fluoride membranes (100 V, 100min). Then membranes were blocked for 1 h at room temperature in 5% BSA solution and incubated with appropriate primary antibody overnight at 4 °C. The primary antibodies were listed as followed: SLC7A5 (LAT1) (Cell Signaling Technology, USA: 1:1000); GAPDH (Santa Cruz, USA: 1:1000); AKT (Invitrogen, USA: 1:1000); p-ATK (Ser473) (Cell Signaling Technology, USA: 1:1000); mTOR (Proteintech Group, USA: 1:1000); p-mTOR (Ser2448) (Santa Cruz, USA: 1:1000). After washing with TBST, the membrane was incubated with corresponding HRP-labeled secondary antibody (Santa Cruz, USA: 1:10000) for 1 h. The bands were visualized using ECL kit and FluorChem E system (Proteinsimple, USA).
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5

Western Blot Analysis of mTOR Pathway

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Following SDS-PAGE and transfer to nitrocellulose, membranes were incubated overnight at 4°C with primary antibodies against iNOS (sc-651, Santa Cruz Biotech), mTOR (sc-2983 Santa Cruz), p-mTOR Ser 2448 (sc-2971 Santa Cruz), Phospho-4E-BP1 (Thr37/46) (sc-9459, Santa Cruz), 4E-BP1 (sc-9977, Santa Cruz), Tuberin/TSC2 (D57A9) (sc-3990 , Santa Cruz), Hamartin/TSC1 (sc-4906), Actin (sc-1616, Santa Cruz) followed by appropriate secondary antibody conjugated to horseradish peroxidase. Results were visualized by commercial chemiluminiscence kit (Millipore). Relative signal intensities for total and phospho-proteins were quantitated by densitometry using Image-J software (National institutes of Health, Bethesda, MD), and normalized densitometry values were expressed as ratio of phospho- to total protein levels.
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6

Western Blot Analysis of T-2 Toxin Effects

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TM3 cells were lysed in cold RIPA buffer (50 mM Tris–HCl pH 7.4, 150 mM NaCl, 0.25% sodium deoxycholate, 1% NP-40, 0.1% SDS, 10% glycerol) including protease inhibitors complex after treatment with T-2 toxin for predetermined times. Samples were separated in a 10% polyacrylamide gel and then transferred onto PVDF membranes (Immobilon-P Transfer membrane, Millipore, Billerica, MA, USA). The membranes were blocked with TBS-T buffer (20 mM Tris, 137 mM NaCl, pH 7.6, 0.1% Tween-20) containing 5% gelatin for 1 h at room temperature and subsequently probed at 4 °C overnight with special p-Akt, p-mTOR ser473, p-mTORser2448, Procaspase-3, cleaved caspase-3, or β-actin antibodies (Santa Cruz Biotechnology, Santa Cruz, CA, USA), and then incubated with goat anti-rabbit IgG or goat anti-mouse IgG as secondary antibodies (Santa Cruz Biotechnology, Santa Cruz, CA, USA) for 1 h at room temperature.
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7

Molecular Mechanisms of 20(S)-GRh2 in Cancer

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20(S)-GRh2, with a purity of 99.48%, was obtained from Beijing North Carolina Chuanglian Biological Technology Research Institute (Beijing, China). Working stock solutions of 20(S)-GRh2 were prepared by dissolving compounds in dimethyl sulfoxide (DMSO; Sigma-Aldrich, Milan, Italy) before use. The final density of DMSO was < 0.1%. LY294002 (PI3K inhibitor), GSK690693 (Akt inhibitor), and Rapamycin (mTOR inhibitor) were obtained from Sigma (St. Louis, MO, USA).
The primary antibodies against cytochrome c, cleaved caspase-3, Beclin-1, Atg5, cyclin B1, and cyclin D1 and the secondary antibodies were obtained from Cell Signaling Technology (Danvers, MA, USA). β-Actin, Bax, Bal-2, LC3, p-P70S6K, and p-4EBP1 were purchased from the Abcam company (Cambridge, MA, USA). PI3K (p85), Akt, p-Akt (Ser473), mTOR, and p-mTOR (Ser2448) were derived from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The primary antibody against human CD3 was purchased from eBioscience (San Diego, CA, USA).
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8

Western Blot Analysis of Protein Expression

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Total proteins were extracted using RIPA lysis buffer (Beyotime Institute of Biotechnology, Jiangsu, China). The proteins (50 μg total) were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to polyvinylidene fluoride membranes. After incubating with 5% skim milk in Tris-buffered saline and Tween-20(TBST) at 37°C for 30 min, the membranes were probed for the following primary antibodies: mouse anti-AFP (1:500), -AKT or mTOR (1:500) or -β-actin (1:1000); rabbit ant-CXCR4 (1:400), -p-AKT(Ser473) (1:500), or -p-mTOR(Ser2448) (1:500) antibody(all from Santa Cruz Biotechnology Inc.) overnight at 4°C. After three washes with TBST, the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies for 1 hour at 37°C. The bands were visualized using enhanced chemiluminescence reagents (Thermo Fisher, Rockford, IL, USA) and analyzed with a gel analysis system (VersDoc TM5000MP System; BIO-RAD, Guangzhou, China). The expression of β-actin was used as loading control.
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9

Protein Extraction and Western Blot Analysis of Kidney Tissues

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The kidney tissues were homogenized in a radioimmunoprecipitation assay (RIPA)buffer, which includes 1% NP40, 0.1% SDS, 100 mg/ml phenylmethylsulfonyl fluoride (PMSF), 1% protease inhibitor cocktail, and 1% phosphatase I and II inhibitor cocktail (Sigma-Aldrich), on ice. After centrifugation at 13,000 × g at 4°C for 30 min, protein concentration in the supernatants was determined using the bicinchoninic acid (BCA) protein assay. Equal amounts of protein were separated by 10 or 15% sodium dodecyl sulfate (SDS-PAGE) and transferred onto polyvinylidene difluoride (PVDF) membranes. The membranes were exposed to primary antibodies against SIRT3, LC3-I/II, BECN1, cleaved caspase-3, β-actin (Cell Signaling, Danvers, MA, United States), phospho (p)-AMPK (Thr172), AMPK, p-mTOR (Ser2448), and mTOR (Santa Cruz Biotechnology, Dallas, TX, United States).
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