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20 protocols using ab223500

1

Western Blot Analysis of Apoptosis Markers

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RIPA (GBCBIO, G3424) was used to lyse cells and extract total protein to prepare protein samples. The protein lysates were separated by conventional electrophoresis, transferred onto the membrane, and washed with PBS, followed by blocking with 1% BSA for 2 h. Then, primary antibodies Box (ab32503, Abcam, Cambridge, UK), Bcl-2 (ab32124, Abcam, Cambridge, UK), Caspase-1 (ab32503, Abcam, Cambridge, UK), Cleaved Caspase-3 (ab32503, Abcam, Cambridge, UK), Caspase-8 (ab207802, Abcam, Cambridge, UK), Caspase-9 (ab2302, Abcam, Cambridge, UK), Caspase-11 (ab25901, Abcam, Cambridge, UK), Cyclin D1 (ab202068, Abcam, Cambridge, UK), ERK 1/2 (ab180673, Abcam, Cambridge, UK), p-ERK 1/2 (ab16663, Abcam, Cambridge, UK), WNT (ab17942, Abcam, Cambridge, UK), β-catenin (ab223500, Abcam, Cambridge, UK), GSDMD (ab15251, Abcam, Cambridge, UK) and β-actin (ab32572, Abcam, Cambridge, UK) (abcam, ab32503, ab32124, ab207802, ab2302, ab25901, ab202068, ab180673, ab16663, ab17942, ab223500, ab15251, ab32572, ab219800, ab8227) each at 1:1000 dilution were incubated with the membrane overnight at 4°C. The next day, HRP (ab32572, Abcam, Cambridge, UK) and labeled IgG secondary antibody (ab150077, Abcam, Cambridge, UK) each at 1:5,000 were further incubated with the membrane at room temperature for 1 h. ECL Luminescence Kit (Thermo, 32209) was used to develop the signal in a dark room.
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2

Murine Model of Hepatic Fibrosis

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Male C57BL6/J mice weighing 20–25 g were housed at the Ethics Committee for Animal Experiments of the First Hospital of China Medical University under a 12 h:12 h light/dark cycle with a constant temperature (22 ± 1 °C) and free access to food and water. All animal experiments were performed according to the National Institutes of Health guide for the care and use of Laboratory animals, and were approved by the Animal Care and Use Committee of the First Hospital of China Medical University.
The detailed information of antibodies are as follows: Anti-ILEI antibody (ab72182, Abcam, Cambridge, U.K.), Anti-α‐SMA antibody (ab5694, Abcam), Anti-vimentin antibody (ab137321, Abcam), Anti-E‐cadherin antibody (ab133597, Abcam), Anti-p‐Akt antibody (ab18206, Abcam), Anti-Akt antibody (ab126811, Abcam), Anti-p‐ERK antibody (ab223500, Abcam), Anti- ERK antibody (ab17942, Abcam), Anti-collagen Ι antibody (ab34710, Abcam), Anti-LIFR antibody (sc-659, Santa cruz, Dallas, U.S.A.),Anti-collagen ΙII antibody (WL03186,wanleibio,Shenyang, China), Anti-β‐actin antibody (WL01845,wanleibio).
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3

Protein Isolation and Western Blot Analysis

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Total proteins were isolated from ESCs by RIPA buffer (Beyotime, Shanghai, China) and quantified with a BCA assay kit (Thermo Fisher Scientific, Waltham, MA, USA). Proteins (20 µg) were separated by 10% SDS-PAGE gels and transferred to polyvinylidene difluoride (PVDF) membranes (Roche, Mannheim, Germany). The membranes were blocked with 5% defatted milk and incubated with the primary antibodies as follows: anti-E-cadherin (ab40772, 1:10,000), anti-N-cadherin (ab76011, 1:5,000), anti-GAPDH (ab9485, 1:2,500), anti-MAP3K2 (ab33918, 1:10,000), anti-p-Erk1/2 (ab223500, 1:400), anti-Erk1/2 (ab184699, 1:10,000), anti-p-JNK (ab124956, 1:5,000), anti-JNK (ab199380, 1:2,500), anti-p-p38 (ab178867, 1:1,000), and anti-p38 (ab170099, 1:5,000) (all from Abcam, Cambridge, MA, USA) at 4°C overnight, followed by incubation with the horseradish peroxidase-conjugated secondary antibody of goat anti-rabbit IgG H&L (Abcam, ab175781, 1:10,000) at room temperature for 2 h. The proteins were visualized using an ECL kit (Cwbiotech, Beijing, China) and quantified with the Amersham Imager 600 (GE Healthcare Life Sciences, Little Chalfont, UK).
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4

Analyzing MAT2B Protein Expression and Signaling Pathways in TNBC

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To measure the protein level of MAT2B in human breast cell lines and explore whether AKT and ERK signalling pathways were associated with MAT2B knockdown in TNBC, we performed western blot analysis. We divided MDA-MB-231 cells into four groups as described above. Proteins were extracted, loaded, separated by sodium dodecyl sulphate polyacrylamide gel electrophoresis, and transferred onto a polyvinylidene difluoride membrane. The membrane was blocked, washed, and incubated overnight with primary antibodies against MAT2B (1:500 dilution;ab109484;Abcam), phosphorylated AKT (p-AKT; 1:1,000 dilution; ab38449; Abcam), AKT (1:1,000 dilution; ab8805; Abcam), phosphorylated ERK1/2 (p-ERK1/2; 1:1,000 dilution; ab223500; Abcam), ERK1/2 (1:1,000 dilution; ab17942; Abcam), and actin (1:2,000 dilution; sc70319;Santa Cruz). The membrane was then washed, incubated with secondary antibodies (Santa Cruz Biotechnology), and visualised by enhanced chemiluminescence. Band intensity was quantified with ImageJ software and protein expression was standardised to actin.
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5

Western Blot Analysis of Protein Expression

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Protein was extracted from tissues using RIPA buffer. After denaturing at 95°C for 10 minutes, protein was separated on a 12% SDS‐polyacrylamide gel and then transferred to a polyvinylidene fluoride membrane. After blocking with TBST buffer containing 5% non‐fat milk for 1 hour at room temperature, the membrane was co‐incubated with primary antibodies: rabbit anti‐CAMK2N1 (PA5‐23740, 1:1000; Thermo Fisher Scientific, Waltham, MA, USA), rabbit anti‐p‐ERK1/2 (ab223500, 1:400; Cambridge, MA, USA), rabbit anti‐ERK1/2 (ab17942, 1:1000; Abcam), rabbit anti‐p‐EMK (ab60002, 1:500; Abcam), rabbit anti‐EMK (ab60002, 1:2000; Abcam), rabbit anti‐Bax (ab32503, 1:1000; Abcam), rabbit anti‐Bcl2 (Bcl2, 1:2000; Abcam) and GAPDH (ab8245, 1:500; Abcam) at 4°C overnight. The membrane was co‐incubated with HRP‐conjugated goat anti‐rabbit IgG (ab6721, 1:2000; Abcam) at 37°C for 1 hour after washing with TBST. Finally, the results were visualized using Chemical Mp Imaging System (Bio‐Rad, Hercules, CA, USA) and analysed by Gel‐ProAnalyzer (UnitedBio, USA). Protein levels were normalized to GAPDH.
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6

Western Blot Analysis of Cell Signaling Proteins

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For WB, all cells were collected and lysed in RIPA lysis buffer. Proteins were resolved on SDS-PAGE gels and transferrd proteins to negative controls (NC) membranes and then followed by standard WB protocols. The primary antibodies used were: CXCR4 (Abcam, ab124824), β-actin (Abcam, ab8226). β-Catenin (Abcam, ab32575), ERK1/2 (Abcam, ab184699), pERK1/2 (Abcam, ab223500), pAKT (Abcam, ab38449), and AKT1/2/3 (Abcam, ab179463).
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7

Western Blotting for Protein Expression

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RIPA lysis buffer (E-BC-R327, Elabscience, China) was utilized to lyse total protein from HeLa and SiHa cells undergoing indicated treatments. Then, the lysates were assigned to protein quantification by BCA protein assay kit (P0010S, Beyotime, China). Equal amounts of protein were loaded onto PVDF membranes (AR0136-02, Boster, China) and blocked with 5% skimmed milk (P0216, Beyotime, China) as previously described [19 (link)]. Thereafter, the membranes were incubated with primary antibodies at 4°C overnight and then with secondary antibodies for 2 h at room temperature. Immunoreactive blots were determined by ECL Western Blotting Substrate (32209, Thermo Fisher, USA) and quantified using iBright Imaging System (CL750, Invitrogen, USA). The relative protein level of genes was normalized to GAPDH. All antibodies purchased from Abcam (UK) were anti-MMP-2 (ab92536, 1/1000, 74 kDa), anti-MMP-9 (ab38898, 1/1000, 92 kDa), anti-p-Erk1/2 (ab223500, 1/400, 44, 42 kDa), anti-Erk1/2 (ab184699, 1/10000, 44, 42 kDa), anti-CXCL3 (ab220431, 1/1000, 11 kDa), anti-GAPDH (ab8245, 1/500, 36 kDa), anti-mouse IgG (ab205719, 1/2000) and anti-rabbit IgG (ab97051, 1/2000).
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8

Protein Extraction and Western Blot Analysis

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Tissues or cells were lysed in RIPA lysis buffer (Beyotime) to extract total proteins. After separation by 12% SDS‐PAGE, proteins were transferred onto PVDF membranes (Bio‐Rad) and then blocked in 5% skim milk. The membranes were next incubated with the primary and secondary antibodies, including anti‐MAP4K3 (#92427; Cell Signaling Technology), antiproliferating cell nuclear antigen (anti‐PCNA; ab18197; Abcam), anti‐Bcl‐2‐associated X protein (anti‐Bax; ab182733), anti‐ERK1/2 (ab17942; Abcam), anti‐p‐ERK1/2 (ab223500; Abcam), anti‐JNK (AB208035; Abcam), anti‐p‐JNK (ab76572; Abcam), anti‐p38 (ab32142; Abcam), anti‐p‐p38 (ab178867; Abcam), anti‐GAPDH (ab9485; Abcam) and goat‐anti rabbit (ab205718; Abcam). The protein signals were detected using an enhanced chemiluminescence system (Beyotime).
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9

Protein Expression Analysis in CAL-27 Cells

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The CAL-27 cells were collected and treated with radio-immunoprecipitation assay (RIPA) lysis buffer containing protease inhibitor. Cell samples were quantified by a bicinchoninic acid (BCA) kit (Beyotime). Then, the total proteins were separated by a sodium dodecyl sulfate (SDS)-polyacrylamide gel and transferred to polyvinylidene difluoride (PVDF) membranes (Millipore, Billerica, MA, USA). After sealing with 5% non-fat milk in Tris buffered saline Tween (TBST), the membranes were incubated with specific primary antibodies overnight at 4 °C. The primary antibodies used were as follows: Ki67 (ab16667, Abcam, UK), PCNA (#2586, cell signaling technology, CST, USA), caspase-3 (ab13847, Abcam), caspase-9 (ab32539, Abcam), survivin (ab76424, Abcam), SOX2 (ab97959, Abcam), NANOG (ab109250, Abcam), OCT4 (ab18976, Abcam), STAT3 (ab119352, Abcam), p-STAT3 (ab76315, Abcam), ERK1/2 (ab17942, Abcam), p-ERK1/2 (ab223500, Abcam). On the next day, the horseradish peroxidase-conjugated secondary antibody anti-mouse IgG (#7076, CST) or anti-rabbit IgG (#7074, CST) were incubated for 2 h at room temperature. Finally, the targeted strips were visualized using an electrochemiluminescence (ECL) solution. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as an internal control.
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10

Western Blot Analysis of Cell Signaling

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After transfection for 48 h, radioimmunoprecipitation assay (RIPA) buffer containing phosphatase and protease inhibitors was used for total protein extraction. Proteins from each group were separated and transferred to a polyvinylidene fluoride membrane. The membrane was then blocked, followed by incubation with primary antibodies (1:1000) overnight at 4 °C. Next, the secondary antibodies (1:5000) were given for 1 h at room temperature. After incubation with the enhanced chemiluminescence (ECL) reagent, the expression values of proteins were normalized against GAPDH and quantified with QUANTITY ONE software. Anti-human SIL1 (1: 500, ab5639), Cyclin D1 (1: 2000, ab16663), CDK4 (1: 2000, ab108357), CDK6 (1: 1000, ab124821), ERK1/2 (1: 1000, ab17942), p-ERK1/2 (1: 500, ab223500), Acitve-Caspase9 (1: 1000, ab32539), Bcl-2 (1: 1000, ab182858), Bax (1: 1000, ab32503), and GAPDH (1: 5000, ab181602) were all purchased from Abcam (USA). Each experiment included triplicate measurements. Secondary antibodies, Goat Anti-Mouse IgG H&L (HRP) (ab205719), and Goat Anti-Rabbit IgG H&L (HRP) (ab6721) were also purchased from Abcam (USA).
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