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Anti ire1α antibody

Manufactured by Cell Signaling Technology
Sourced in United States

The Anti-IRE1α antibody is a laboratory reagent designed for the detection and study of the IRE1α protein, a key component of the unfolded protein response (UPR) pathway. This antibody is intended for use in various research applications, such as Western blotting, immunoprecipitation, and immunohistochemistry, to investigate the role and regulation of IRE1α in cellular processes.

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6 protocols using anti ire1α antibody

1

IRE1α Interactome Profiling

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NCI-H929 cells were treated with 10 μg/ml tunicamycin for 4 hours. Cells were lysed in buffer containing 1% Triton X-100; 10 mM Tris pH7.6; 10 mM EDTA; 150 mM NaCl and twice standard concentrations of PhosStop and complete protease inhibitors (Roche). Lysates were spun at 12000 × g for 10 minutes to remove nuclei. Supernatants were transferred to fresh tubes and incubated overnight with anti-IRE1α antibody (Cell Signaling Technology, Danvers, MA, USA). Antibody:IRE1α complexes were captured with protein A/G magnetic beads (Thermo Fisher Scientific, Hemel Hempstead, UK) and washed five times in lysis buffer before elution into reducing Laemmli sample buffer. Proteins were separated by SDS-PAGE and stained with coomassie for mass spectrometry.
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2

Immunoprecipitation of Sulfonated IRE1α

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Sulfonation was performed as was previously reported [33 (link)]. Total thoracic aorta tissues and HUVECs (~500 μg) were prepared using lysis buffer (Cell Signaling Technologies) containing protease and phosphatase inhibitors (Sigma-Aldrich). Immunoprecipitation was performed with anti-cysteine-sulfonate (#ab176487, Abcam), followed by an anti-IRE1α antibody (#3294, Cell Signaling) to detect IRE1α sulfonation. Protein A/G Sepharose beads (Sigma-Aldrich) were added and incubated for 1 h. Immunoprecipitates were washed 5 times with PBS-T buffer or PBS, separated using SDS-PAGE, and probed with specific antibodies.
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3

Fatty Acid Regulation of Cell Stress

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Palmitic acid (PA) was purchased from Aladdin (Shanghai, China). Oleic acid (OA), eicosapentaenoic acid (EPA), docosahexaenoic acid (DHA), arachidonic acid (AA), and stearic acid (SA) were purchased from Sigma (Shanghai, China). Bovine serum albumin (BSA) was purchased from Solarbio (Beijing, China). A Cell Counting Kit-8 (CCK-8) was purchased from Beyotime (Shanghai, China). Anti-Cleaved caspase-3, anti-IRE1α antibody, anti-p-eif2a antibody, and anti-BAX antibody were purchased from Cell Signaling Technology (Hong kong, China). Donkey Anti-Mouse IgG H&L (Alexa Fluor® 488), Donkey Anti-Rabbit IgG H&L (DyLight® 550), and anti-BCL-2 antibody were purchased from Abcam (Cambridge, UK). Anti-ATF6 antibody and anti-CHOP antibody were purchased from Affinity bioscience (Jiangsu, China). Anti-actin antibody was purchased from ABclonal (Shanghai, China). Anti-BIP antibody and anti-glucagon antibody was purchased from absin (Shanghai, China). Anti-Insulin antibody and anti-ATF4 antibody were purchased from Huaan (Hangzhou, China). Anti-XBP-1 antibody and HRP labelled goat anti-rabbit IgG were purchased from Wanlei (Shenyang, China). TRIizol reagent was purchased from Ambion (TEXAS, USA). A high-capacity cDNA synthesis kit was purchased from Vazyme (Nanjing, China).
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4

Investigating Cell Signaling Pathways

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Proteins were extracted from cells and then used for western blot analysis. Drug treated cells were lysed with RIPA buffer containing a protease inhibitor cocktail and a phosphatase inhibitor cocktail (CWBIO, USA). Proteins were resolved by SDS-PAGE, transferred to PVDF membranes (Bio-Rad, USA), blocked with 5% skimmed milk powder. Then, the membranes were detected by incubation with 1:1000 dilutions of primary antibodies, washed, and incubated with Goat anti-rabbit-HRP antibodies and developed using WesternBright™ ECL (Advansta, USA). The following primary antibodies were used for western blot analysis: anti-p-IRE1α antibody, anti-IRE1α antibody, anti-CHOP antibody, anti-Cleaved caspase 3, anti-caspase 12, anti-Bcl2 Ser70, anti-p-p38 antibody, anti-p38 antibody (Cell Signaling Technology, USA), anti-β-catenin and anti-GAPDH (Proteintech, USA).
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5

Crosslinking Assay for IRE1α Oligomerization

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Increasing concentrations of protein were crosslinked by incubation with 250 μM disuccinimidyl suberate (Sigma) for 45 minutes at room temperature in buffer containing 50 mM Hepes pH7.5, 120 mM NaCl, 2 mM DTT, 1 mM EDTA and 10% glycerol. The crosslinking reaction was quenched with 50 mM Tris–HCl pH 7.5. Samples were subjected to electrophoresis on a NuPAGE 4-12% Bis-Tris gel (Life technologies) and immunoblotted using an anti-IRE1α antibody (Cell Signalling Technologies).
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6

Investigating IRE1α-TM6SF2 Interaction

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Huh-7 cells were harvested and used for Co-IP with a rabbit polyclonal anti-IRE1α antibody (Cell Signaling, #3294), followed by immunoblotting with the anti-TM6SF2 antibody to detect the association between IRE1α and TM6SF2 in Huh-7 cells under the normal or lipid overload conditions. In brief, 300 μg of protein extracts were incubated with 20 μl of protein A-agarose beads, and 3 μg of anti-IRE1α antibody at 4°C for overnight with rotation. After centrifugation, the supernatant containing non-bound protein was removed, and the eluted proteins were separated by SDS-PAGE. The blots were incubated with anti-TM6SF2 antibody overnight at 4°C, then incubated with secondary antibody conjugated to horseradish peroxidase (1: 10,000) for 1 h at room temperature. Signals were detected using ECL Western Blotting Substrate on X-ray film.
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