The largest database of trusted experimental protocols

Nis element analysis software

Manufactured by Nikon

NIS-Element analysis software is a comprehensive suite of imaging tools designed for microscopy applications. It provides a robust platform for image acquisition, processing, analysis, and management. The software offers a range of advanced features to support scientific research and analysis, including multi-dimensional imaging, image segmentation, and quantitative analysis.

Automatically generated - may contain errors

5 protocols using nis element analysis software

1

Osteoclast Differentiation Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
After initially seeding, both cell lineages were allowed to grow and attach the wall for 24 hours. After 24 hours, we starting to treat cells with cocktailed stimulators for 10 days, and we counted this initial treating day as day 0. Subsequently, cellular morphological alterations were recorded and evaluated at days 1, 2, 3, 4, 5, 6 and 7 by an inverted microscope Nikon (Nikon) and NIS‐Element analysis software (Nikon) for image analysis. TRAP staining kits were purchased from Sigma‐Aldrich Co. According to instructions, after PBS washing two cell lineages were fixed by paraformaldehyde (4%) lasting for 30 minutes. Subsequently, both cell lineages were washed by PBS and then stained by TRAP solution at 37°C in 1 hour, the staining results were evaluated by Nikon (Nikon) and NIS‐Element analysis software (Nikon) for image analysis.
+ Open protocol
+ Expand
2

Time-lapse Imaging of Embryonic Development

Check if the same lab product or an alternative is used in the 5 most similar protocols
Time-lapse experiments were performed utilizing a Yokogawa spinning Disk (ECLIPSE Ti2-E) confocal microscope with W1-SoRa module (Nikon). 30 hpf embryos were anesthetized in 0.016% tricaine solution and included laterally in 1% low-melting point agarose in 35 mm confocal Petri dishes to provide stability during imaging. Included embryos were soaked in 0.016% tricaine solution to prevent the gel from drying out. Embryos were acquired for 6 h every 5 min (magnification 20X, step size 0.5μm). Images were processed and analyzed using the NIS Element Analysis Software (Nikon) and the Fiji (ImageJ) software.
+ Open protocol
+ Expand
3

Quantifying Intracellular ROS Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
The intracellular level of ROS is an important biomarker for oxidative stress, and an increased ROS level generally indicates a threat to genomic integrity. The production of ROS was estimated with the fluorescent dye 2′,7′-dichlorodihydrofluorescein diacetate (H2DCFDA). H2DCF is non-fluorescent, but in the presence of intracellular ROS it is oxidized to highly fluorescent dichlorofluorescein (DCF). The intracellular ROS level in the control and treated PC12 was analyzed by using the dichlorodihydrofluorescein diacetate (DCFDA) assay (Thermo Fisher Italia, Monza, Italy), according to the manufacturer’s instructions. The ROS derivatives were quantified on a Guava easyCyte flow cytometer (Merck Millipore, Burlington, MA, USA), following the manufacturer’s instructions. These stained cells were spread on a glass slide and stained with DAPI. Next, these slides were observed with a fluorescent microscope (Nikon Eclipse Ci) (Ex-465–495 nm) under low light conditions to reduce photo-bleaching. The image analysis and processing were carried out using NIS-Element analysis software (Nikon, Milan, Italia).
+ Open protocol
+ Expand
4

Visualizing Podosome Formation in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
We performed cytoskeletal fibrous actin (F‐actin) staining for two subjects in order to observe the podosome patterns and sealing zone formation in each cell linages. Briefly, two cell lineages were washed by PBS, after washing cells were incubated in formaldehyde (4%) for 15 minutes fixing, then cells washed by PBS for three times. In order to increase permeability, before the phalloidin red incubation, the Triton X‐100 (0.1%) was added for 1 minutes. After 1 hour of incubation, DAPI was used for nucleus staining. F‐actin–stained cytoskeletons were visualized and quantified with a fluorescence microscope Nikon (Nikon) and NIS‐Element analysis software (Nikon) for image analysis. Besides that, we performed SEM. Briefly, matrices were then fixed by sodium cacodylate (0.1 M) containing glutaraldehyde (2.5% (v/v)); the final cells were recorded by the JSM6700F electron microscope.
+ Open protocol
+ Expand
5

Evaluating F-actin Ring Formation

Check if the same lab product or an alternative is used in the 5 most similar protocols
To evaluate whether mature F‐actin ring formation was influenced by UB. We performed cytoskeletal fibrous actin (F‐actin) staining to observe sealing zone formation in RAW264.7 cells. Briefly, the cells were washed by PBS, after washing cells were fixed in 4% paraformaldehyde for 15 min, then cells washed by PBS three times, permeabilized with 0.1% Triton X‐100 for 15 min and stained with Rhodamine‐phalloidin in the dark for 1 h. For nuclear staining, cells were incubated with DAPI for 10 min. F‐actin stained cytoskeletons were visualized and quantified with a fluorescence microscope Nikon and nis‐Element analysis software (Nikon) for image analysis.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!