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7 protocols using nunc immuno microwell 96 well solid plates

1

Quantitative HA Antigen Detection

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The reference and test HA antigens were from NIBSC and Green Cross Pharma, respectively. The group specific ‘capture’ antibody against HA stalk was diluted with 0.05 M carbonated-bicarbonate buffer (Sigma-Aldrich, St Louis, MO) and coated on immunoassay plates (Nunc-Immuno™ MicroWell™ 96 well solid plates; Thermo Fisher, Waltham, MA) and kept at 4 °C overnight. The plates were blocked with 5% solution of skim milk (BD Diagnostic, Franklin Lakes, NJ) at 37 °C for 1 hour. Then, the serial two-fold diluted HAs, pretreated with 10% (w/v) Zwittergent 3–14 detergent (Sigma-Aldrich, St. Louis, MO) and pH 4.5 NaOAc buffer15 (link), were added and incubated at 37 °C for 1 hour. Anti-HA serum that corresponded with the subjected HA antigen was added and incubated for 1.5 hours. Next, peroxidase-conjugated anti-Sheep IgG H & L (HRP) (ab97130; Abcam, Cambridge, UK) was added and incubated for 1 hour. Subsequent steps were identical with the indirect ELISA. The concentration of test HA was calculated by the slope ratio method57 based on the slope of linear regions in the calibration curve of the ELISA response.
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2

Enzyme-Linked Immunosorbent Assay for HA Antigen Detection

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The serial two-fold dilutions of HA antigens, which were pretreated with pH 4.5 sodium acetate buffer (NaOAc) containing 200 mM DTT (1,4-dithiothreitol) according to previously established protocol15 (link), were coated on immunoassay plates (Nunc-Immuno™ MicroWell™ 96 well solid plates; Thermo Fisher, Waltham, MA) at 4 °C overnight. Then, the plates were blocked with 5% solution of skim milk (BD Diagnostic, Franklin Lakes, NJ) at 37 °C for 1 hour. Next, the uAb was added and incubated at 37 °C for 2 hours. After this, peroxidase-conjugated goat anti-mouse IgG antibody (Sigma-Aldrich, St. Louis, MO) was added and incubated at 37 °C for 1 hour. The plates were washed with PBST buffer (PBS with 0.05% Tween-20) after each step. At last, peroxidase substrate (BD Biosciences, Franklin Lakes, NJ) was added and incubated at 37 °C in the dark for 30 minutes. The substrate development was terminated by adding 0.2 N H2SO4. A FLUOstar Optima microplate reader (BMG Labtech, Ortenberg, Germany) was used for measuring optical density at 450 nm (OD450nm).
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3

ELISA for COVID-19 Antibody Detection

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Plasma samples from the severe COVID-19 case and the 5 asymptomatic cases were isolated from blood via standard centrifugation. Elisa was performed as described previously [35 ]. Briefly, 96-well ELISA plates (Nunc-Immuno™ MicroWell™ 96 well solid plates; Thermo Fisher Scientific, MA, USA; catalog no. 167008) were coated by incubation overnight at 4 °C with human IFN-α2 recombinant protein (2 μg/ml; Miltenyi Biotec, Bergisch Gladbach, Germany; catalog no. 130-093-874) and human IFN-ω recombinant protein (eBioscience, CA, USA; catalog no. BMS304). Coated plates were then washed (PBS, 0.005 % Tween 20), blocked by incubation with 5 % nonfat milk powder in the same buffer, washed, and incubated with 1:250 dilutions of plasma from the patients or controls for 2 h at room temperature. Horseradish peroxidase (HRP)-labelled anti-human IgG, IgM or IgA (Abcam, Cambridge, MA, USA; catalog no. ab102420) was added to a final concentration of 2 μg/ml. To develop the plate, 100 μl/well of TMB substrate solution (TMB Substrate Kit, Thermo Fisher Scientific, MA, USA; catalog no. 34021) was added and incubated for 5 min. The reaction was stopped with 2 M sulfuric acid (100 μl/well) and optical density at 450/630 nm was measured via BioTek EL808 microplate reader.
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4

Diabetes Induction and Fibronectin Assay

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Cellular fibronectin, from human foreskin fibroblasts (cat. no. F2518), Monoclonal anti-fibronectin cellular antibody produced in mouse clone 3E2 (cat. no. F6140), Anti-Fibronectin antibody produced in rabbit (F3648), TLR4 inhibitor TAK-242 (cat. no. 614316), Nunc-Immuno MicroWell 96 well solid plates (cat. no. M9410) were procured from Sigma-Aldrich, MO, USA). Fetal bovine serum and D-Glucose (cat. no. 50-99-7) were procured from Gibco, Applied biosystems, Bangalore, India. Streptozotocin (STZ) extra pure (cat. no. 14653) and Nicotinamide extra pure (cat. no. 72860) were procured from Sisco Research Laboratories Pvt. Ltd. Delhi, India. TMB Substrate Solution (cat. no. N301) from Thermo Scientific Waltham, MA, USA). Goat anti-rabbit IgG H&L (cat. no. ab6721) and goat anti-mouse IgG H&L (cat. no. ab6789) from Abcam, MA, USA. Insulin (Huminsulin R 100 IU Injection) from Eli Lily and Company (India) Pvt. Ltd. Glucometer (On Call Plus G113-214) and blood glucose test strips (On Call Plus, G133-119) were procured from ACON Biotech (Hangzhou) Co. Ltd., Hangzhou, China.
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5

Fucoidan Anticancer Effects on MDA-MB-231 Cells

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Crude fucoidan (CF) from F. vesiculosus (batch number: SLBP3196 V) was purchased from Sigma-Aldrich and used as received. The fucoidan presents a molecular weight of 107 800 Da (from the product certificate of analysis), measured by Gel Permeation Chromatography -Multi-angle Laser Light Scattering. The sulfation degree was 15%, based on the S:C atomic ratio of 0.025 obtained from a XPS analysis. Human breast adenocarcinoma cells (MDA-MB-231 cell line) and cell culture medium (M199 and D-MEM high glucose) were purchased from Sigma-Aldrich, whereas endothelial cell growth supplement (ECGS) and Matrigel were both acquired from Corning. Fetal bovine serum (FBS) and MEM sodium pyruvate were purchased from Life Technologies. Biotinylated Sambucus Nigra Lectin (SNA, EBL) was purchased from Vector Laboratories. MTS assay (CellTiter 96 ® AQueous One Solution) was bought from Promega. VEGF and PDGF Development ELISA kits were both purchased from Prepotech. 96-well plate (Nunc-Immuno MicroWell 96-well solid plates) and 2,2′-azino-bis (3-ethylbenzthiazoline-6-sulfonic acid) (ABTS) were purchased from Sigma-Aldrich.
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6

SARS-CoV-2 N Protein Peptide Array Assay

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A 59-peptide array covering the amino acid sequence of the N protein as 17 or 13 mer with 10-amino-acid overlaps was obtained from BEI Resources (catalog no. NR-52404). One milligram of lyophilized peptide was resuspended in 1 mL phosphate-buffered saline (PBS) and diluted to 5 μg/mL in PBS, and 100 μL was added to each well of a 96-well microtiter plate (Nunc-Immuno MicroWell 96-well solid plates; Fisher Scientific). Plates were stored at 4°C for 24 to 48 h and washed three times with 250 μL PBS plus 0.05% Tween 20 (PBS-T). Plates were blocked with 200 μL PBS-T plus 2% bovine serum albumin for 4 h. Blocking buffer was removed and replaced with 100 μL patient sera diluted 1:1,000 in blocking buffer. Plates were incubated for 1 h at room temperature and then washed three times with PBS-T. One hundred microliters of 1 μg/mL horseradish peroxidase (HRP)-conjugated anti-human IgG in blocking buffer was added to wells and incubated for 1 h at room temperature with shaking. The plate was washed three times with 250 μL PBS-T. We added 100 μL 3,3′,5,5′-tetramethylbenzidene (TMB) substrate to wells for 1 min, and then reactions were stopped with 100 μL stop solution. Absorbance was read at 450 nm on a Molecular Devices SpectraMax M3 spectrophotometer using SoftMax Pro v6.5.1 software.
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7

SARS-CoV-2 N Protein Peptide Array Assay

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A 59-peptide array covering the amino acid sequence of the N protein as 17 or 13 mer with 10-amino-acid overlaps was obtained from BEI Resources (catalog no. NR-52404). One milligram of lyophilized peptide was resuspended in 1 mL phosphate-buffered saline (PBS) and diluted to 5 μg/mL in PBS, and 100 μL was added to each well of a 96-well microtiter plate (Nunc-Immuno MicroWell 96-well solid plates; Fisher Scientific). Plates were stored at 4°C for 24 to 48 h and washed three times with 250 μL PBS plus 0.05% Tween 20 (PBS-T). Plates were blocked with 200 μL PBS-T plus 2% bovine serum albumin for 4 h. Blocking buffer was removed and replaced with 100 μL patient sera diluted 1:1,000 in blocking buffer. Plates were incubated for 1 h at room temperature and then washed three times with PBS-T. One hundred microliters of 1 μg/mL horseradish peroxidase (HRP)-conjugated anti-human IgG in blocking buffer was added to wells and incubated for 1 h at room temperature with shaking. The plate was washed three times with 250 μL PBS-T. We added 100 μL 3,3′,5,5′-tetramethylbenzidene (TMB) substrate to wells for 1 min, and then reactions were stopped with 100 μL stop solution. Absorbance was read at 450 nm on a Molecular Devices SpectraMax M3 spectrophotometer using SoftMax Pro v6.5.1 software.
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