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Myiq rt pcr machine

Manufactured by Bio-Rad

The MyIQ RT-PCR machine is a real-time PCR (reverse transcription-polymerase chain reaction) instrument designed for gene expression analysis and quantification. It is capable of performing quantitative, real-time PCR reactions to detect and measure target DNA or RNA sequences.

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2 protocols using myiq rt pcr machine

1

Quantitative RT-PCR Influenza Virus Detection

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At indicated times, total RNA was isolated from whole lung tissue using an RNeasy kit according to the manufacturer's instructions (Qiagen). RNA was then reverse-transcribed into cDNA using the first-strand cDNA synthesis kit according to the manufacturer's instructions (Invitrogen). Viral titre was quantitated by RT-PCR using Genesig (Primer Design) for human influenza virus subtype (H3) following the manufacturer's instructions. β-actin was used to normalize changes in H3 specific gene expression. PCR samples were run and analyzed on a Biorad myIQ RT-PCR machine.
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2

RT-qPCR Analysis of Inflammatory Genes

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RNA was isolated with Trizol (Life Technologies), treated with DNase, and repurified. cDNA was prepared from 1 µg total RNA, using a reverse transcription system (Promega), and examined by RT-qPCR, using 5 µl of cDNA, 0.3 µM gene-specific primers, and SYBR Green Supermix (Bio-Rad) on a MyIQ RT-PCR machine (Bio-Rad). The following primers were used: human hypoxanthine phosphoribosyl transferase (HPRT): 5’-ACCAGTCAACAGGGGACATAAA AG-3’ (forward); 5’-GTCTGCATTGTTTTGCCAGTGTC-3’ (reverse), TNF-α, forward: 5’-CCCAGGCAGTCAGATCATCTTCC-3’, reverse: 5’-GCTTGAGGGTTTGCTACAACATG-3’; CXCL-8, forward: 5′-CACCGGAAGGAACCATCTCACT-3′, reverse: 5′-TGCACCTTCACACAGAGCTGC-3′; pro-IL-1β: forward: 5’-AAATGATGGCTTATTACAGTGGCA-3’, reverse: 5’-CTTCATCTGTTTAGGGCCATCAG-3’; MKP-1, forward: 5’-CAGTACCCCACTCTACGATCA-3’, reverse: 5’-ACCCTCAAAATGGTTG GGACA-3’; PTP1b, forward: 5’-GCTTCTCCTACCTGGCTGTG-3’; reverse: 5’-TTGTGTGGCTCCAGGATTC-3’; PP2A, forward: 5’-TGCCAATGGTCTCACACTGG-3’; reverse: 5’-GCCTGGTTCCC ACAACGATA-3’; PTPN22, forward: 5’-CCACTTCCTGTACGGACACC-3’, reverse: 5’-TGTTCCACCCCATTCCAGTG-3’. Data were analyzed as described [19 (link),20 (link),26 (link),29 (link)].
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