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8 protocols using ar1177

1

Immunofluorescent Analysis of α-SMA and Nrf2

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Slides were then incubated with specific primary antibodies against a-SMA (rat, Ab5694, 1 : 200, Abcam, USA) and Nrf2 (Ab62352, 1 : 200, Abcam, USA) at 4°C overnight. Next day, after washing with 1x PBS for 5 min/3times, slides were incubated with secondary antibody (1 : 500, Boster, China) for 1 h at room temperature. Then, samples were stained with DAPI (AR1177, BOSTER, China) and sealed in antifade fluorescence mounting medium (AR1109, BOSTER, China) with coverslips. The detection of a-SMA and Nrf2 proteins was performed under a fluorescence microscope (IX71, Olympus, Japan). Nrf-2 positive cells were counted using Image pro plus software. The percentage of Nrf-2 in the nucleus was quantitatively analyzed by the ratio of nuclear Nrf-2 positive cells to total cells in each field.
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2

Immunofluorescence-based Analysis of HSF1 Distribution

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The distribution of HSF1 was assessed by immunofluorescence as described previously [26 (link)]. Briefly, the cells were fixed with 4% paraformaldehyde (G1101-500ML, Servicebio, Wuhan, China) for 15 min, permeabilized with 1% Triton X-100 (G5060-100ML, Servicebio, Wuhan, China) for 10 min, and incubated overnight at 4 °C with anti-HSF1 primary antibody (A13765, 1:100, Abclonal, Wuhan, China). Next, the cells were incubated with Cy3-labeled goat anti-rabbit antibody (BA1032, Boster, Wuhan, China) for 1 h and DAPI (AR1177, Boster, Wuhan, China) for 15 min at room temperature. The distribution of HSF1 was then observed by fluorescence microscopy (IX73-A12FL/PH, OLYMPUS, Japan).
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3

Immunofluorescence Staining of Neural Cells

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Immunofluorescence staining was performed in vitro on coverslip cultures or frozen brain tissue sections as previously described [27 (link)]. Briefly, cells were fixed in 4% PFA for 20 min (frozen tissue sections did not require this step), washed with phosphate-buffered saline (PBS), and then blocked by QuickBlock™ Blocking Buffer for Immunol Staining (Beyotime, P0260) for 30 min at room temperature. The primary antibodies were added and incubated overnight at 4°C. Primary antibodies included mouse anti-Nestin (Millipore, MAB5326, 1 : 1000), rabbit anti-PAX6 (BioLegend, 901301, 1 : 1000), goat anti-SOX1 (R&D Systems, AF3369, 1 : 1000), rat anti-HOXB4 (DSHB, RRID: AB-2119288, 1 : 100), rabbit anti-Foxg1 (Abcam, Ab18259, 1 : 500), mouse anti-NKX2.1 (Millipore, MAB5460, 1 : 500), rabbit anti-GABA (Sigma-Aldrich, A2052, 1 : 1000), goat anti-CHAT (Millipore, AB144P, 1 : 300), mouse anti-neuronal class III β-tubulin (Tuj1; BioLegend, 801201, 1 : 2000), mouse anti-microtubule-associated protein-2 (Map2; Sigma-Aldrich, M1406, 1 : 1000), mouse anti-human nuclei (HuNu; Millipore, MAB1281, 1 : 500), goat anti-mCherry (Biorbyt, RRID: AB-2687829), and rabbit anti-NeuN (Millipore, ABN78, 1 : 1000). The corresponding fluorescent-conjugated secondary antibodies were applied for 1 h, and the nuclei were stained with DAPI (Boster, AR1177).
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4

SPIDER-β-gal Assay for Cell Imaging

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After fixing the cells for 15 min with 4% paraformaldehyde, they were treated for 15 min at 37 °C with 1 μmol/L SPIDER-β-gal (SG02, Dojindo, Kumamoto, Japan). DAPI staining (AR1177, Boster Bio, Shanghai, China) was applied to the nuclei for 10 min. Following the wash with PBS, cells were observed using the LSM900 confocal microscope (Zeiss, Oberkochen, Germany).
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5

EdU Click-iT Assay for Proliferation

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As per the instructions of kFluor488 Click-iT EdU (KGA331, KeyGEN, Suzhou, China), a 20 μM EdU working solution was prepared. A working solution in equivalent volume was added, which contained 10 μM EdU to a 24-well plate, incubating for 24 h. Then, the cells underwent 4% PFA fixation and 0.5% Triton X-100 (T8200, Solarbio, Beijing, China) permeabilization, followed by washing with 3% BSA (9048-46-8, Aladdin, Wuhan, China). Then, the Click reaction solution for a 30 min incubation in the dark was added. DAPI staining (AR1177, Boster Bio, Shanghai, China) was applied to the nuclei. Cells were observed under LSM900 confocal microscope.
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6

Immunofluorescence Analysis of Autophagy Markers

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SH-SY5Y cells were seeded on slides in 12-well culture plates. After drug treatment, the cells were fixed with ice-cold methanol for 5 min, blocked with 1% bovine serum albumin (BSA) for 30 min, and then incubated with primary antibodies against LC3 (1:200) and P62 (1:100) at 4°C overnight. The next day, the slides were incubated with Alexa Fluor 488 (Bioss Antibodies, bs-0295G-AF488, Beijing, China) or Alexa Fluor 555 (Bioss Antibodies, bs-0296G-AF555, Beijing, China) secondary antibodies (1:500) at 37°C for 1 h and incubated with DAPI (Boster, AR1177, Wuhan, China) for 5 min. Fluorescence was observed with a fluorescence microscope (Olympus, BX53, Tokyo, Japan).
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7

Visualizing lipid droplet formation in A549 cells

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A549 cells in logarithmic growth phase were inoculated into 24-well plates containing cell slides, cultured in an incubator and treated with 100 μM C3G for 12 h. After treatment, the medium was discarded, washed once with PBS, Then fix with 4% paraformaldehyde for 20 min, discard paraformaldehyde and wash with PBS for 3 times, add 500ul Bodipy (Bodipy™ 493/503,D3922, Thermo Fisher Scientific Inc.) working solution (10μM Bodipy: PBS = 1:1000) to each well for staining for 30 min in the dark, then wash with PBS for 3 times, stain the nucleus with DAPI staining solution (AR1177, Boster Biological Technology co. Itd,) for 10 min, wash with PBS for 3 times, mount with anti-fluorescence quencher, and observe under an inverted fluorescence microscope (Leica TCS SP2, Leica, Weztlar, Germany).
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8

Immunofluorescence Staining of ASC

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Tumor cells were fixed in 100% methanol (chilled at −20°C) for 5 min and then washed three times with ice-cold PBS. Cells were then incubated in PBST (PBS +0.1% Tween 20) containing 1% BSA and 10% goat serum for 30 min to block the unspecific binding of the antibodies. Incubate cells with anti-ASC antibody (1:200, 10500-1-AP; Cell Signaling Technology) in PBST containing 1% BSA in a humidified chamber overnight at 4°C. Decant the first primary antibody solution and wash the cells 5 min for three times with PBS. Incubate cells with IFluor 488 (HA1121, HuaBio) in PBST containing 1% BSA for 1 h at room temperature in the dark. Decant the first secondary antibody solutions and wash the cells three times with PBS for 5 min each in the dark. Incubate cells with DAPI (AR1177, BOSTER) for 1 min and rinse with PBS. Images were photographed by confocal laser scanning microscopy (LSM800; Carl Zeiss) using ×63 Apochromat objective in a blinded manner and analyzed with ImageJ software (https://imagej.net/).
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