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Cy3 conjugated donkey anti rabbit igg

Manufactured by Jackson ImmunoResearch
Sourced in United States, United Kingdom, Panama

Cy3-conjugated donkey anti-rabbit IgG is a secondary antibody that binds to rabbit primary antibodies. The Cy3 fluorescent dye is conjugated to the antibody, allowing for detection and visualization of target proteins in various applications, such as immunohistochemistry and Western blotting.

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86 protocols using cy3 conjugated donkey anti rabbit igg

1

Immunostaining of Brain Sections

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After cryosection, 2 μm thick brain sections were mounted onto glass slides. Sections were washed with PBS (pH 7.4), followed by antigen retrieval using sodium citrate buffer, pH 6, at 95°C for 25 min in a water bath. Nonspecific staining in sections was blocked using 10% donkey serum in 0.1% Tween 20-PBS for 1 h at room temperature. Primary antibodies were added overnight at a dilution of 1 : 350 for goat Iba-1 (Abcam), 1 : 1,000 for rabbit MMP-2 (Abcam) at 4°C. Alexa 488-conjugated donkey anti-goat IgG (1 : 200, Jackson Lab, Suffolk, United Kingdom) or Cy3-conjugated donkey anti-rabbit IgG (1 : 200, Jackson Lab) was subsequently applied. The nuclei were counterstained with DAPI (Sigma-Aldrich). Images were taken using a microscope (Axio Imager Z1, Carl Zeiss, China). This part was similar with the methods of Hu et al. [32 (link)].
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2

Skin Biopsy for Intra-Epidermal Nerve Fiber Density

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The determination of intra-epidermal nerve fiber density (IENFD) from skin biopsy samples is a validated and sensitive diagnostic tool for the assessment of small fiber pathology. Biopsy samples were taken in accordance with the consensus document produced by the European Federation of Neurological Societies/Peripheral Nerve Society Guideline on the utilization of skin biopsy samples in the diagnosis of peripheral neuropathies (Lauria et al., 2010 (link)). Skin biopsies were taken with a disposable 3mm punch biopsy circular blade (Stiefel Laboratories Inc, GSK Plc) from 10 cm proximal to the lateral malleolus and from the lateral aspect of the proximal thigh. Nerve fibers were visualized using rabbit anti-PGP9.5 antibody (Zytomed, 1:200) with Cy3-conjugated donkey anti-rabbit IgG (Jackson ImmunoResearch, 711-165-152, 1:1000). The nerve fibers are counted as they cross the epidermal-dermal junction in order to quantify intra-epidermal nerve fiber density. Images were taken using an LSM 700 microscope with a Plan-Apochromat objective (Carl Zeiss) at 40 × and 63 × magnification.
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3

Immunohistochemical Analysis of Rat Spinal Cord

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Rats were deeply anesthetized with 0.4% sodium pentobarbital anesthesia (40 mg/kg
body weight, i.p.) and perfused transcardially with 500 ml of cold
phosphate-buffered saline (PBS) followed by 500 ml of cold 4% paraformaldehyde
(PFA). The spinal cord was removed and postfixed with the same 4% PFA for 1–2 h
at 4°C and then transferred to 30% sucrose in PBS overnight. Sample sections (20
μm thickness) were adhered on gelatin-coated glass slide with a cryostat
(Leica). The sections were washed three times with PBS pH = 7.35–7.40 and then
hatched in PBST (0.3% Triton in PBS) for 40 min, blocked with QuickBlock buffer
(Beyotime, P0260) for 10 min, subsequently incubated overnight at 4°C with
primary antibody for rabbit-anti-p-PKC (1:200, Abcam),
mouse-anti-CGRP (1:200, Abcam), goat-anti-GFAP (1:200, Abcam),
mouse-anti-OX-42(1:200, Abcam), anti-IB4(1:50, Sigma), and mouse-anti-NeuN
(1:200, Millipore). The sections were then incubated for 60 min at room
temperature with secondary antibodies Cy3-conjugated donkey anti-rabbit IgG
(1:200, Jackson ImmunoResearch), FITC-conjugated donkey anti-goat IgG (1:200,
Jackson ImmunoResearch), and Alexa 488-conjugated donkey anti-mouse IgG (1:200,
Thermofisher). The stained sections were captured with LSM 780 (Carl Zeiss). The
fluorescent density was quantified with a computer-assisted imaging analysis
system (ImageJ, National Institutes of Health).
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4

Immunohistochemical Analysis of Protein Expression

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Immunohistochemical staining was performed to detect the expression of proteins in tissues and cells. Anti‐PSMA antibody (1:250; ab133579), anti‐CD56 antibody (1:2000; ab220360), anti‐solute carrier family 3‐member 2 (SLC3A2) antibody (1:2500; ab244356) and anti‐solute carrier family 7‐member 11 (SLC7A11) antibody (1:500; ab37185) were purchased from Abcam. The PSMA, CD56, SLC3A2, and SLC7A11 protein expression levels were assessed by IHC according to the recommended protocol [19 (link)]. Briefly, the protocol included tissue or cell fixation, serum blocking, primary antibody incubation (4°C, 12 hours), marked second antibody incubation (25°C, 30 minutes), staining, judgment of the results and imaging. The DNA dye 4',6‐diamidino‐2‐phenylindole (DAPI) was obtained from Molecular Probes (San Francisco, CA, USA). The secondary antibody used was Cy3‐conjugated donkey anti‐rabbit IgG (Jackson ImmunoResearch Laboratory, West Grove, PA, USA). All stained cells were examined and photographed with a Leica SP5 confocal fluorescence microscope (Wetzlar, Germany).
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5

Immunohistochemical Analysis of Neurogenesis

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Three coronal sections from each mouse (450-μm interval) were incubated with 10% normal donkey serum for 1 hour and then with the following primary antibodies for overnight at 4℃: rabbit polyclonal anti-doublecortin (anti-DCX, 1:1,000; Millipore Corp., Burlington, MA, USA), mouse monoclonal anti-human nuclei (hNU, 1:200; Millipore Corp.). After washing with PBS, the sections were incubated with the following secondary antibodies for 2 hours at room temperature (22℃±3℃): Alexa488-conjugated donkey anti-mouse IgG (Jackson ImmunoResearch, West Grove, PA, USA), Cy3-conjugated donkey anti-rabbit IgG (Jackson ImmunoResearch). Then, after washing with PBS, the sections were mounted with DAPI (4, 6-diamidino-2-phenylindole)-included mounting media and observed using a confocal microscopy (LSM 510 Meta; Carl Zeiss, Oberkochen, Germany).
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6

Immunohistochemical Analysis of Mouse Brains

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All implanted mouse brains were collected for histological analysis. Fixed brains were transferred to a 30% sucrose solution for 24-72 hours to equilibrate and were subsequently frozen and sectioned coronally at 40-μm thickness on a sliding microtome. Antibodies used were rabbit anti-Iba1 (Wako Cat. No. 019-19741) at 1:1000 dilution, goat anti-FOS (Santa Cruz Cat. No. sc-48869) at 1:250 dilution, Cy3-conjugated donkey anti-rabbit IgG (Jackson Labs Cat. No. 711-165-152) at 1:250 dilution and Alexa 488-conjugated donkey anti-goat IgG (Jackson Labs Cat. No. 705-545-003) at 1:250 dilution. 4’6’-Diamidino-2-phenylindole (DAPI) was used to label nuclei. Immunofluorescence images were acquired using an Olympus confocal microscope and images were processed using ImageJ.
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7

Caveolin-1 Expression Analysis Protocol

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Cells were trypsinized, centrifuged for 5 min at 1000g, rinsed in PBS/1 mM MgCl2 (PBSM), and centrifuged and fixated with 4% paraformaldehyde for 10 min at 4 °C, followed by 15 min at room temperature. Fixated cells were rinsed with PBSM, suspended in PBSM/3% FCS for 15 min, and incubated with anti-caveolin1 antibody for 30 min at room temperature. Cells were then rinsed in PBSM/3% FCS, suspended for 30 min in PBSM/3% FCS containing secondary antibody Cy-3 conjugated donkey anti rabbit IgG (1:200) (Jackson Immunoresearch), rinsed in PBSM/3 % FCS, and re-suspended in PBSM/3% FCS. Caveolin was analyzed using FACScan (BD Biosciences).
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8

Calcineurin Immunohistochemistry Protocols

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The following primary antibodies were used in the present study: rabbit anti-Pan-Calcineurin A (2614, CST, USA), rabbit anti-Calcineurin A (ab3673, Abcam, USA), rabbit anti-β-Actin (4970, CST, USA), mouse anti-NF-200 (MAB5262, Chemicon, USA), mouse anti-GFAP (MAB3402, Chemicon, USA), goat anti-CGRP (ab36001, Abcam, USA), and lectin from Bandeiraea Simplicifolia-BSI-B4 FITC conjugate (L2895, Sigma-Aldrich, USA). The secondary antibodies included fluoresce in (FITC) Affinipure donkey anti-mouse IgG (715-095-150, Jackson ImmunoResearch, USA), Alex Fluor 488 AffiniPure donkey anti-goat IgG (705-545-003, Jackson ImmunoResearch, USA) and Cy3-conjugated donkey anti-rabbit IgG (711-165-152, Jackson ImmunoResearch, USA). The drugs included ulinastatin (Techpool Company, Guangdong, China) and exogenous CN (BML-SE163-5000, Enzo LifeSciences, USA). IL-10 ELISA kits (R1000, R&D Systems Inc, MN, USA) were used to measure IL-10.
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9

Visualizing Neurons Expressing ChR2 via c-Fos

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To assess activation of neurons expressing ChR2, immunofluorescent labeling of the intermediate-early gene c-Fos was carried out. Brain tissue was rinsed in 50 mM KPBS (pH 7.4) and incubated in blocking solution (KPBS, 0.1% BSA, and 0.2% TritonX-100) for 1 h at room temperature. Brain slices were then transferred into rabbit polyclonal anti-c-Fos (sc-52) primary antibody (1:1,000; Santa Cruz Biotechnology, Dallas, TX) overnight at 4°C (Jones et al. 2011 (link)). The next day, brain tissue was rinsed in KPBS and incubated in Cy3-conjugated donkey anti-rabbit IgG (1:500; Jackson ImmunoResearch) for 30 min, followed by a final rinse. Sections were then mounted onto slides and cover slipped. To quantify specificity of the CaMKIIα promoter, immunofluorescent labeling of the GABAergic marker glutamic acid decarboxylase 67 (GAD67) was carried as described above using mouse monoclonal anti-GAD67 primary antibody (1:1,000; Millipore) and Cy3-conjugated donkey anti-mouse IgG (1:500; Jackson ImmunoResearch).
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10

Astrocyte and Microglia Immunolabeling

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Goat polyclonal antibodies against glial fibrillary acidic protein (GFAP; 1:100; ab53554, Abcam) and rabbit polyclonal antibodies against fibronectin (1:100; PAA037Ga01, Cloud-Clone Corp.) were used as primary antibodies to label astrocytes and fibronectin-positive structures, respectively. Alexa Fluor 488-conjugated donkey anti rabbit IgG (10 µg/ml; Jackson ImmunoResearch Laboratories) and Cy3-conjugated donkey anti rabbit IgG (10 µg/ml; Jackson ImmunoResearch Laboratories) were used as secondary antibodies, and DyLight 488-conjugated tomato lectin (Vector Laboratories) was used with DAPI to label microglia.
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