The largest database of trusted experimental protocols

6 protocols using nci5079

1

Protein Extraction and Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole protein was extracted by lysis buffer and denatured through heating at 100 °C for 5 min. Protein concentration in the supernatant was quantified by a BCA Protein Assay Reagent kit (Pro.23228, Thermo Fisher Scientific, USA). Dodecyl sulfate-polyacrylamide electrophoresis was conducted with 20 μg total protein loaded in each well. After electrophoresis, separated proteins were transferred to a nitrocellulose membrane (Millipore, Italy) in buffer. Following primary antibody (MUC1, Proteintech, 19976-1-AP, China; XPNPEP2, GeneTex, GTX109995, Irvine, CA, USA) and secondary antibody (Proteintech, 10230-1-AP, China) incubation, target protein bands were detected by an enhanced chemiluminescence kit (NCI5079, Thermo Fisher).
+ Open protocol
+ Expand
2

CXCR4 Expression Analysis in A549 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Following transfection for 48 h, the A549 lung cancer cell line was washed with phosphate-buffered saline and 50 μl lysis buffer solution was added. Cells were collected and allowed to stand for 30 min at 4°C, and then centrifuged at 13,800 × g for 20 min. Next, the supernatant was collected and total protein concentration was measured by BCA assay (P0010; Beyotime, Shanghai, China). Protein (50 μg) was obtained for 12% polyacrylamide gel electrophoresis and electrically transferred to PVDF membrane, which had been soaked in Tris-Buffered Saline and Tween 20 (TBST) containing 5% skimmed milk powder. Nonspecific antigens were blocked for 2 h at room temperature. Mouse anti-human CXCR4 polyclonal antibody (1:400) was added and the membranes were incubated overnight at 4°C, before being washed with TBST containing 5% skimmed milk powder. Horseradish peroxidase-labeled goat anti-rabbit secondary antibody (1:50,000) was added and the mixture was reacted at room temperature for 2 h. The chemiluminescent substrate (NCI5079; Thermo Fisher Scientific, Rockford, IL, USA), ECL, was added following membrane washing, and the results were analyzed by a GIS image analysis system (Bio-Rad).
+ Open protocol
+ Expand
3

Osteogenic Differentiation Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Osteogenic medium, scaffolds, and seeded cells were collected and co-cultured for 21 days to obtain cells. RIPA lysis buffer (Beyotime Biotechnology, Shanghai, China) was added to extract total cell proteins. Protein concentration was detected usingthe BAC method (Beyotime Biotechnology), and a 4 μg/μl protein solution was prepared. The proteinswereseparated by 12% SDS-PAGE electrophoresis and transferred to a PVDF membrane (Millipore, Billerica, MA, United States). After blockingwith 5% skimmed milk for 1 h, membranes were cultured with primary antibodies as follows: ALP (1:1000, ab229126, Abcam, Cambridge, United Kingdom), BSP (1:1000, #5468, Cell Signaling Technology), OCN (1:1000, ab133612, Abcam), OSX (1:1000, ab209484, Abcam), RUNX2 (1:1000, ab236639, Abcam), OCT4 (1:1000, ab181557, Abcam), SOX2 (1:1000, ab92494, Abcam), Nanog (1:1000, ab109250, Abcam), VEGF (1:1000, bs-0279R, Bioss), and GAPDH (1:2500, ab9485, Abcam). The next day, secondary antibodies (A0208, Beyotime Biotechnology) were added to the membrane, and the protein bands were detected usingECL (NCI5079, Thermo Fisher Scientific, Shanghai, China).
+ Open protocol
+ Expand
4

FTO Protein Expression in Post-MCAO Brain

Check if the same lab product or an alternative is used in the 5 most similar protocols
The brain cortex was harvested 24 h after MCAO/R for western blotting. Brain tissue was homogenized in RIPA buffer (0.1 g/ml) (P0013B, Beyotime, Shanghai, China) at 4°C. The protein concentration was measured using BCA assay (P0010, Beyotime). Equal amounts of protein were loaded in the sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gel, and the following antibodies were employed: anti-fat mass and obesity-associated protein (FTO) (1:1,000, abclonal, Wuhan, China), anti-GAPDH [1:1,000, Cell Signaling Technology (CST), MA, United States] and HRP-conjugated secondary antibody (1:3,000, CST). Protein blots were visualized with a chemiluminescence detection kit (NCI5079, Thermo Fisher Scientific, Waltham, MA, United States). The data were analyzed using ImageJ software (v 1.52r, Bethesda, MD, United States).
+ Open protocol
+ Expand
5

Proteome Analysis of Lung Adenocarcinoma

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples of lung adenocarcinoma participants were gathered for protein detection. RIPA buffer with protease inhibitor cocktail (Roche, Basel, Switzerland) was used for sample preparation and the supernatants were then resuspended in sample buffer. After denaturation of the samples by the way of boiling for 10 min, 30% polyacrylamide gel was used for protein electrophoresis with the same amount (40 μg). Whereafter, PVDF membrane was used for protein transfer (Millipore, Massachusetts, USA). Blocking buffer was used to block membranes for 2 h, then the following antibodies were used SEPT9 (Abcam [Cambridge, USA] ab38314, 1:500), HIST1H2BH (Abcam ab1790, 1:1000); MAPT (Abcam ab64193, 1:500), GAPDH (Goodhere [Hangzhou, China] AB‐P‐R 001, 1:1000), and finally overnight under the condition of 4°C. The membranes were in a state of HRP‐linked secondary antibodies (Boster [Wuhan, China] BA1054, 1:50,000) for 2 h after cleaned by TBST for three times on the following day. An electrochemiluminescence (ECL) detection kit (Thermo [Waltham, USA] NCI5079) was used for immunoreactive protein bands observation at the completion of washing. Azure c300 Gel Imaging System (Azure Biosystems, Dublin, USA) and BandScan software was used to scan and quantify protein bands. Three times have been done for all of the experiments.
+ Open protocol
+ Expand
6

Western Blot Analysis of CysLT1, CysLTR1, Nrf-2, and HO-1

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot assays were proceeded as previously described [24 (link)]. Briefly, 40 μg total protein was separated by 10% SDS-PAGE and transferred to an activated PVDF membrane (IPVH00010, Millipore, Thermo Scientific, USA). The membrane was immersed in 5% fat-free milk at room temperature for 1 h and incubated with primary antibodies against CysLT1 (ab151484, Abcam, USA), CysLTR1 (a5393, Boster, China), Nrf-2 (ab31163, Abcam, USA), and HO-1 (ab13243, Abcam, USA) at 4°C overnight. β-actin (BM0627, Boster, China) served as the internal control. After incubation with Goat anti-Rabbit IgG Secondary Antibody, HRP (BA1054, BOSTER, China), or Goat anti-Mouse IgG Secondary Antibody, HRP (BA1051, BOSTER, China) at room temperature for 1 h, the membrane was washed with TBST for 3 times. The proteins were visualized after incubating with ECL (NCI5079, Thermo Scientific, USA) using the Imagequant LAS 4000 mini machine (GE Healthcare Life Sciences, USA). All samples were performed at least 3 independent experiments.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!