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SiATF6 is a small interfering RNA (siRNA) that targets the Activating Transcription Factor 6 (ATF6) gene. ATF6 is a key transcription factor involved in the unfolded protein response (UPR), which is a cellular stress response related to the endoplasmic reticulum (ER). SiATF6 can be used to study the role of ATF6 in various cellular processes and pathways.

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2 protocols using siatf6

1

siRNA Transfection in MRC5 Cells

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Predesigned siRNAs (100 pmol) were transfected into MRC5 cells with Lipofectamine 3000 reagent (Cat#L3000015, Invitrogen, Waltham, MA, USA), according to the manufacturer’s instructions. We used the following siRNAs: siRNA negative control (Cat#sc-37007, Santa Cruz), sip62 (Cat#1144479, Bioneer, Daejeon, Korea), siNrf2 (Cat#sc-37030, Santa Cruz), siATF6 (Cat#sc-37699, Santa Cruz), siHSF1 (Cat#sc-35611, Santa Cruz), siHIF1 (Cat#sc-35561, Santa Cruz), and siRTN4 (Cat#sc-43974, Santa Cruz).
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2

Silencing of UPR Sensors in Human Trophoblast

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Total RNA from human term trophoblast previously transfected with siRNA against IRE1α, ATF6 and PERK were used [17 (link)]. Briefly, VCT cells were transfected with 16.6 nM siATF6 (SantaCruz Biotechnology, Labforce, Muttenz, Switzerland), 16,6 nM of siIRE1α (SantaCruz Biotechnology, Labforce, Muttenz, Switzerland) and 16,6 nM of siPERK (SantaCruz Biotechnology, Labforce, Muttenz, Switzerland) or 50 nM control siRNA (SantaCruz Biotechnology, Labforce, Muttenz, Switzerland) using Interferin transfection reagent (Polyplus transfection SA, Illkirch-Graffenstaden, France) and following the manufacturer’s protocol [17 (link)]. RNA extracted from trophoblast cells incubated with LPV or DMSO control with or without IRE1α inhibitor (STF-083010) was also analyzed. An amount of 500 ng of total RNA were reversed transcript with SuperScript® III Reverse Transcriptase Kit (InvitrogenTM, Carlsbad, CA, USA). The qPCR was performed using cDNA diluted 1/5 in RNase-DNase free water using the the TakyonTM ROX SYBR® MasterMix blue dTTP (Eurogentec, Kaneka, Liège, Belgium). Data were normalized using SDHA, 18S and HPRT as endogenous controls. Used primers are described in Table 2.
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