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6 protocols using minidawn treos three angle light scattering detector

1

Multi-Angle Light Scattering Analysis of MORF1

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MALS experiments were performed at 18°C. Samples were passed over a Superdex 200 increase 10/300 (His6-MORF179–190) or a Superdex 75 10/300 gel filtration column (MORF179–190) coupled to a miniDAWN TREOS three-angle light scattering detector (Wyatt Technology) and a RefractoMax520 refractive index detector (ERC). Detectors were aligned, corrected for band broadening, and photodiodes were normalized with BSA as a reference. For calculation of the molecular mass, protein concentrations were determined from the differential refractive index with a specific refractive index increment (dn/dc) of 0.185 ml/g. Data were analyzed with ASTRA 6.1.4.25 (Wyatt Technology). For analytical gel filtration, MORF179–190 or MORF186–186 were passed over a Superdex 75 10/300 gel filtration column and UV absorbance at 280 nm was recorded.
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2

SEC-MALS: Characterizing Macromolecular Structures

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Size exclusion chromatography coupled with multi-angle light scattering (SEC-MALS) measurements were performed on a Dionex UltiMate 3000 HPLC system (ThermoFisher) with in-line miniDAWN TREOS three-angle light scattering detector (Wyatt Technology) and Optilab T-rEX differential refractometer (Wyatt Technology). Sample volumes of 100 μL at 20 μM concentration were applied to a Superdex 200 HR 10/300 GL column (GE Healthcare) and developed at a flow rate of 0.4 mL/min in 50 mM Tris, pH 9, 200 mM NaCl, 0.5 mM TCEP. Data were recorded and processed using ASTRA software (Wyatt Technology). A single dn/dc value of 0.185 mL/g was used for all samples, as the typical dn/dc values of proteins (0.16-0.20 mL/g) and RNA (0.17-0.19 mL/g) are quite similar [25 (link)].
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3

Purification and Characterization of IMP3 RRM12

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Purified IMP3 RRM12 (in buffer 20 mM Tris pH 7.5, 150 mM NaCl, 1 mM DTT) was concentrated to 5 mg ml−1 and loaded to a Superdex 200 10/300 GL gel-filtration column (GE Healthcare) equilibrated in 20 mM Tris pH 7.5, 200 mM NaCl, 0.02% w/v NaN3, and 1 mM DTT. Light scattering was recorded with an in-line miniDAWN TREOS three angle light scattering detector (Wyatt Technology), and protein concentration was detected using an in-line Optilab T-rEX refractive index detector (Wyatt Technology). The molecular mass of IMP3 RRM12 was calculated using ASTRA 6 software (Wyatt Technology).
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4

SEC-MALS Analysis of SoBDH2

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SEC-MALS experiments were performed at 18°C. SoBDH2 was loaded onto a Superdex 200 Increase 10/300 column (GE Healthcare) coupled to a miniDAWN TREOS three-angle light-scattering detector (Wyatt Technology) in combination with a RefractoMax520 refractive-index detector. For calculation of the molecular mass, protein concentrations were determined from the differential refractive index with a specific refractive-index increment (dn/dc) of 0.185 ml−1. Data were analyzed using the ASTRA 6.1.4.25 software (Wyatt Technology).
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5

SEC-MALS Analysis of Albicidin Complexes

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SEC-MALS experiments were performed at 18 °C in buffer containing 50 mM Tris (pH 7.5), 100 mM NaCl, and 0.02% NaN3. A sample of 225 µg of AlbAS or AlbAL (with and without saturating amounts of albicidin) were loaded onto Superdex 75 or Superdex 200 increase 10/300 columns (GE Healthcare) that were coupled to a miniDAWN TREOS three-angle light-scattering detector (Wyatt Technology) in combination with a RefractoMax520 refractive index detector. For calculation of the molecular mass, protein concentrations were determined from the differential refractive index with a specific refractive index increment (dn/dc) of 0.185 mL g−1. Data were analyzed with the ASTRA 6.1.4.25 software (Wyatt Technology).
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6

SEC-MALS Protein Characterization

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SEC-MALS experiments were performed at 18 °C. SoBDH2 was loaded onto a Superdex 200 increase 10/300 column (GE Healthcare) that was coupled to a miniDAWN TREOS threeangle light scattering detector (Wyatt Technology) in combination with a RefractoMax520 refractive index detector. For calculation of the molecular mass, protein concentrations were determined from the differential refractive index with a specific refractive index increment (dn/dc) of 0.185 ml -1 . Data was analyzed with the ASTRA 6.1.4.25 software (Wyatt Technology).
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