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Varioskan plate reader

Manufactured by Thermo Fisher Scientific
Sourced in United States, Japan

The Varioskan plate reader is a multi-mode microplate reader capable of performing a variety of optical measurements. It can be used to measure absorbance, fluorescence, and luminescence in microplates. The Varioskan plate reader is designed for a wide range of applications in life science research and drug discovery.

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72 protocols using varioskan plate reader

1

Quantifying Antibodies to HexM Therapeutic Protein

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The indirect enzyme-linked immunosorbent assay (ELISA) technique was used to quantify the presence of antibodies to the HexM therapeutic protein in the sera of experimental mice. A standard curve was developed using 5 μg/mL of HexM-His6 protein (purified separately by the Walia lab) as the antigen, known concentrations of sheep anti-HEXA (obtained from Dr. Don Mahuran, SickKids Hospital, Toronto, ON, Canada) as the primary antibody, and donkey anti-sheep conjugated antibody (1:5000, AB324P; Chemicon International, Temecula, CA, USA) as the secondary antibody. To test the presence of antibodies in the mice, the sera was used as primary antibody and donkey anti-mouse conjugated antibody (1:5000, AP192P, Chemicon International) was used as the secondary antibody. Turbo TMB-ELISA (cat. No. 34022, Pierce, Rochford, IL, USA) substrate solution was then added to the wells for development, followed by a stop solution (0.2 M sulphuric acid). Plates were read at 450 nm absorbance using a Thermo Electron Corporation Varioskan plate reader.
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2

Screening Antibody-Antigen Interactions

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Epitope peptides from human RPTPσ extracellular region were coated onto 96 well plates overnight. The coated plates were washed with PBS 3 times to remove the excess peptides and 3% BSA solution in PBS was added to the peptide coated plate to block non-specific binding. Supernatant from individual hybridoma medium was added and incubated for 1 hr. Followed by 3 washes, a secondary antibody (1:10000, anti-mouse IgG-HRP) was added, incubated for 1 hr. After 3 washes with PBS, ABTS (2,2'-Azinobis [3-ethylbenzothiazoline-6-sulfonic acid]-diammonium salt) was added and the absorbance read at 410 nm using a Varioskan plate reader (Thermo Electron).
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3

Cell Viability Assay with EGCG

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Cell viability was performed as described previously (14 (link)) using CCK-8 kit in accordance with the manufacturer’s instructions. Cells were treated with 0 (control), 1, 5, 10, 20, or 50 μM of EGCG for 24 or 48 h at 37°C. Absorbance was then measured using a Varioskan plate reader (Thermo Electron, Waltham, MA, USA) at 450 nm, and the results were presented as the percentage relative to the untreated control cells. Control cells were incubated with 0.01% DMSO without EGCG treatment.
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4

Protein-Glycosaminoglycan Interaction Assay

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50 μg of the membrane protein fraction overexpressing GFP or RPTPσ N/C was incubated with different amount of Chondroitin sulfate or Heparin at 37°C for 30 minutes followed by the addition of 1 mM p-nitrophenyl phosphate for 30 min. The assay was conducted at 25°C in 96 well plates and the absorbance of p-nitrophenol was monitored at 405 nm every minute using a Varioskan plate reader (Thermo Electron).
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5

Cytotoxicity of TBE-50 and TBE-70 in Adipocytes

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The cytotoxicity of TBE-50 and TBE-70 in adipocytes was evaluated by the WST-8 [2-(2-methoxy-4-nitropheyl)-3-(4-nitrophenyl)-5-(2,4-dinitrophenyl)-2H-tetrazolium, monosodium salt method, using a commercial CCK-8 kit as described previously [63 (link)]. Differentiated 3T3-L1 adipocytes were incubated for 1, 2, 5, or 7 days with TBE-50 or TBE-70 (at a dose of 0, 0.1, 1, 10, 50, 100, or 500 µg/mL). The absorbance was read using a Varioskan plate reader (Thermo Electron, Waltham, MA, USA) at 450 nm, and the results are expressed as the percentage of the control. All assays were carried out in triplicate.
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6

Kinetic Assay of Phosphatase Activity

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The hydrolysis of DiFMUP as a substrate for the indicated PTPs was conducted in black 96-well plates (Corning) in a final volume of 100 μL at 25 °C essentially as described.31 (link) The reaction was monitored by measuring the excitation/emission (358/450 nm) using a Varioskan plate reader (Thermo Electron). The enzyme concentration was determined by choosing a reaction rate comprised in a fluorescence range of 5–20 FU/min and reaction was conducted at the specific Km for each enzyme against DiFMUP. Km was previously determined from rates at various substrate concentrations using Michaelis–Menten equation. For the kinetic assay, the fluorescence was monitored over 10 min in 30 sec intervals and rates were calculated using a non-linear least-square fitting procedure. The 1B/TC inhibitor was diluted in PBS and reaction was performed at a final concentration of 50 μM. PBS was used as control (vehicle) and to determine the ratio of phosphatase activity to DiFMUP in presence or not of inhibitor.
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7

Cell Viability Assay of Adipocytes

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Cell viability was determined as described previously [16 (link)] using a CCK-8 kit according to the manufacturer’s instructions. Differentiated 3T3-L1 adipocytes were treated with 0 (control), 0.1, 1, 10, 100, or 1000 ng/mL of SN or AN for 4 and 24 h at 37°C. For the negative and positive control samples, 0.1% dextran and 0.1% sodium dodecyl sulfate (SDS) was added, respectively. Absorbance was measured using a Varioskan plate reader at 450 nm (Thermo Electron, Waltham, MA, USA) and results are presented as the percentage of untreated control cells. All measurements were performed in at least three independent experiments, each of which was performed in triplicate (n = 3).
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8

Cytotoxicity of ISOR in 3T3-L1 Adipocytes

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The cytotoxicity of ISOR in adipocytes was evaluated using the WST-8 [2-(2-methoxy-4-nitropheyl)-3-(4-nitrophenyl)-5-(2,4-dinitrophenyl)-2H-tetrazolium, monosodium salt method, with a commercial CCK-8 kit as described previously [37 (link)]. Differentiated 3T3-L1 adipocytes were incubated for 1, 2, 5, or 7 days with ISOR (at a dose of 0, 0.1, 0.5, 1, 10, 20, or 50 µM). The absorbance was read using a Varioskan plate reader (Thermo Electron, Waltham, MA, USA) at 450 nm, and the results are expressed as a percentage of the control. All assays were carried out in triplicate.
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9

XTT Proliferation Assay Protocol

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The XTT proliferation assays were performed following a protocol provided by the manufacturer (https://goldbio.com/product/4029/xtt-sodium-salt). In brief, XTT sodium salt was purchased from Gold Biotechnology (St. Louis, MO). The XTT solution was prepared by dissolving 5 mg of XTT in 4 ml of complete cell culture medium. Phenazine methosulfate (PMS; P9625) was obtained from Sigma-Aldrich (St. Louis, MO). The PMS solution was made by dissolving 3 mg of PMS in 1 ml of PBS. To prepare the detection solution, 10 μl of the PMS solution was mixed with 4 ml of XTT solution. Immediately after mixing, 50 or 200 μl of this detection solution was added to each well, depending on the well size (48 or 12 wells). The samples were incubated for 4 to 5 hours at 37°C and thoroughly shaken, and the absorbance at 450 nm was measured after incubation using a Varioskan plate reader (Thermo Fisher Scientific).
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10

Quantifying Membrane-Associated Fluorescence

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ANS (Sigma, St. Louis, MO, USA) is a lipophilic reagent that incorporates naturally into membranes and fluoresces at 512 nm when excited at 350 nm. The ANS assay was performed in parallel on liposomes (0.86 mM phosphatidyl choline (PC), 0.24 mM phosphatidyl ethanolamine (PE) and 0.24 mM cardiolipin (CL)) and OMVs, liposomes serving as references of the ANS assay, as described earlier [23 (link)]. An increasing concentration in liposomes (1 to 5 µg/µL in Tris-KCl buffer (50 mM Tris-HCl, 200 mM KCl, pH 7.5)) as well as 1 or 2 µL of each OMV solution were incubated with 200 µL of 0.001% ANS (in Tris-KCl buffer) in a black flat-bottom 96-well plate (Corning, Corning, NY, USA). The fluorescence was measured at 512 nm after excitation at 350 nm for 100 ms using a Varioskan plate reader (Thermofisher). Concentration measurements were performed in triplicates, and the mean concentrations in lipids were calculated and used to quantify the OMVs in the experiments involving OMVs. The lipid concentration in REL606 OMVs was found to be 2 mg/mL, while that of miRFP713-OMVs was 0.7 mg/mL.
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