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6 protocols using hmga2

1

Western Blot Analysis of HMGA2 Protein

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Protein was measured according to the instructions in the BCA Protein Quantification Kit (Wellbio, China). Briefly, 50 μg of protein sample was resolved with SDS-PAGE and transferred to a PVDF membrane using electroblotting. Blots were blocked with 5% skimmed milk for 1 h; incubated with primary antibody HMGA2 (1:1000; Proteintech) in a shaker at 4°C overnight. Membranes were washed with TBST and incubated with secondary antibody at room temperature for 1 h. Membranes were washed again with TBST and ECL was used to visualize bands. HMGA2 protein expression was normalized to β-actin (1:4000 Proteintech) as an internal reference. OD was calculated for each gray band using Quantity One software. Relative expression of HMGA2 = gray HMGA2 band/gray β-actin band.
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2

Western Blotting Analysis of EMT Markers

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Western blotting was performed as previously described [43 (link)]. The following antibodies were used: Lin28B (Abcam, Cambridge, UK, ab71415), E-cadherin, Vimentin, Snail (Abcam, Cambridge, UK), GAPDH (Boster, Wuhan, China), c-MYC, HMGA2 and KRAS (Proteintech, Chicago, USA). Bands were visualized using an enhanced chemiluminescence (ECL) kit (Millipore, Billerica, MA, USA) according to the manufacturer's protocol. The results using the Image J software to measure its gray value.
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3

Western Blot Analysis of Stem Cell Markers

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Cells or tissues were lysed in RIPA buffer containing phosphatase inhibitor cocktail I (Sigma) and protease inhibitor cocktail mini-tablet (Roche Diagnostics, Indianapolis, IN). Proteins in the lysates were separated on SDS-PAGE and transferred onto polyvinylidenedifluoride membrane. After blocking with 5% non-fat milk in PBST, primary antibodies for ALDH1A1 (1:500, Proteintech Group, 22109-1-AP, Chicago, IL), CD44 (1:500, Cell Signaling Technology, #3570, Beverly, MA), KLF4 (1:500, Proteintech, 11880-1-AP), HMGA2 (1:500, Proteintech, 20795-1-AP), NF90 (1:1,000, ImmunoWay, YT5036, Newark, DE), FLAG-tag (1:2,000, Cell Signaling Technology, #2368), SMAD4 (1:500, Proteintech, 10231-1-AP), p-SMAD2 (1:250, Phospho-Ser467, Signalway Antibody, 11322, College Park, MA), SMAD2 (1:500, AP0444) and β-actin (1:2,000, Bioworld) were used. The membranes were washed with PBST three times and incubated with horseradish peroxidase (HRP)-conjugated secondary antibody. The bands were visualized using enhanced chemiluminescence reagents (Millipore, WBKLS0100). Western blots were semi-quantified by Image J software (NIH).
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4

Protein Expression Analysis in Aortic Smooth Muscle Cells

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Human aortic smooth muscle cells after siRNA‐treated for 48 hours were harvested, and total protein was extracted using RIPA buffer (Solarbio) and 1 mM PMSF (Solarbio). Protein concentrations were determined using the Bradford method (Solarbio). Equal amounts of protein samples were separated by SDS‐PAGE and transferred onto a PVDF membrane (Merck) after electroblotting. The membrane was blocked with 5% non‐fat milk in PBS for 2 hours and then was incubated with the primary antibodies overnight at 4°C: HMGA2 (1:1000, Proteintech), PCNA (1:1,000, Wanleibio), SM22α (1:1,000, CUSABIO) and GAPDH (1:1,000, Wanleibio). After three 5‐minutes washes with TBS‐tween, the membrane was then incubated with goat anti‐rabbit IgG secondary antibody or rat antimouse secondary antibody (dilution at a 1:2000, Wanleibio) at 37°C for 2 hours. The membranes were visualized by ChemiDoc™ MP Imaging System (BIO‐RAD).
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5

Cellular Fractionation and Immunoblotting Protocol

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Cells were lysed with lysis buffer (50 mM Tris-HCl, pH 7.5, 0.15 M NaCl, 1% NP-40, 1 mM EDTA), protease inhibitor cocktail (Roche Applied Science), 1 mM PMSF, 1 mM NaF, and 1 mM sodium orthovanadate. Nuclear and cytoplasmic proteins were prepared as follows: cells were harvested and incubated in buffer A (10 mM Hepes, pH 7.8, 10 mM KCl, 0.1 mM EDTA, 1 mM dithiothreitol, 2 mg/ml aprotinin, 0.5 mM phenylmethylsulfonyl fluoride, and 0.5% Triton X-100). After centrifugation, supernatants were collected as the cytoplasmic proteins. Buffer C (50 mM HEPES, pH 7.8, 420 mM KCl, 0.1 mM EDTA, 5 mM MgCl2, 10% glycerol, 1 mM dithiothreitol, 2 mg/ml aprotinin, and 0.5 mM phenylmethylsulfonyl fluoride) was added to the pellet. After rotation for 30 minutes and centrifugation, supernatants were collected as nuclear proteins. The following antibodies were used for immunoblotting and immunoprecipitation analyses: Flag-M2 (Sigma, F3165), Tubulin (T8328, Sigma), Histone H3 (sc-10809, Santa Cruz), T7 (A190-117A, Bethyl), HMGA2 (20795-I-AP, Proteintech), T7 Tag antibody agarose (69026, Novagen).
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6

Protein Extraction and Western Blot Analysis

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Cell lysis and protein extraction were carried out using the RIPA buffer (1 M Tris-HCl pH 8 (PanReac AppliChem, ITW Reagents), 0.5 M EDTA (Thermo Fisher Scientific), Triton X-100 (Sigma-Aldrich), 10% sodium deoxycholate (Sigma-Aldrich), 10% SDS (Sigma-Aldrich) and 3 M NaCl (Thermo Fisher Scientific)), supplemented with protease and phosphatase inhibitor cocktail (Sigma-Aldrich). Further, 20 µg of protein from each sample were separated by SDS-PAGE and transferred to a 0.2 µm pore-size nitrocellulose membrane (Bio-Rad). Membranes were blocked for 1 h with 5% BSA (PanReac AppliChem, ITW Reagents) in 1x TBS-T (0.1% Tween20, Bio-Rad) and incubated with specific antibodies HMGA2 (Proteintech, 20795-1-AP), HMGB1 (Abcam, ab18256), HMGB2 (Proteintech, 14597-1AP) and ɑ-tubulin (Sigma-Aldrich, T9026) overnight at 4 °C. Then, membranes were washed with 1x TBS-T and incubated with rabbit antimouse IgG (Sigma-Aldrich) or goat antirabbit IgG (Abcam, Cambridge, UK), both conjugated with peroxidase. HRP substrate (GE Healthcare, Life Sciences) was used for chemiluminescent detection, and image acquisition was performed using a Chemidoc Imaging System (Bio-Rad).
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