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Atlantis dc18 column

Manufactured by Waters Corporation
Sourced in United States, United Kingdom

The Atlantis dC18 column is a reversed-phase liquid chromatography column designed for the separation and analysis of a wide range of organic compounds. It features a high-purity, spherical silica-based stationary phase with a C18 bonded ligand. The column is suitable for use in a variety of liquid chromatography applications.

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40 protocols using atlantis dc18 column

1

Quantification of Tyrosine, Nitisinone, and HGA

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Plasma samples from tail bleeds were analysed for tyrosine, nitisinone and HGA using a previously published method (Hughes et al. 2015 (link)). In brief, samples were analysed for all three analytes in a single run on an Agilent 6490 triple quadrupole tandem mass spectrometer with Jet-Stream® electrospray ionization coupled with an Agilent 1290 Infinity II UHPLC pump. Separation was achieved on an Atlantis dC18 column (100 × 3.0 mm, 3 µm, Waters) maintained at 35 °C. Quantification was achieved using a matrix matched seven-point calibration curve and two product ion transitions for each analyte of interest (HGA 167 > 122 and 167 > 108, negative polarity; tyrosine 182 > 136 and 182 > 91; nitisinone 330 > 218, positive polarity).The linear measuring range for tyrosine, HGA and nitisinone were 60–2000; 15–500 and 0.5–10 μmol/L, respectively. 2 μL of deproteinized sample was diluted 1:1000 with 200 nmol/L 13C6-HGA, 500 nmol/L d4-tyrosine and 2 nmol/L 13C6-nitisinone in 0.1% formic acid/deionized water. 10μL of diluted plasma was injected onto the column. Data were acquired using MassHunter LC/MS Data Acquisition (version B.07.00, Build 7.0). HGA, tyrosine and nitisinone concentrations were calculated using MassHunter Quantitative Analysis (version B.06.00, Build 6.0).
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2

Spinal Cord Biogenic Amine Analysis

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In a cohort of 26 animals, mice were randomized and coded before being sacrificed after 28 d of being in ketosis. KD animals underwent the standard KD diet paradigm as outlined above. On the day of tissue collection, animals were sacrificed using high doses of isoflurane (5%) in an induction chamber. The spinal column was extracted by cutting the sacrum and cervical vertebral levels using large scissors. The spinal cord was extracted using a 10 ml syringe loaded with aCSF with fluid pressure initiated in the lumbar region. The spinal cord was trimmed to contain only the lumbar enlargement (L1–L6), and the spinal cords were flash frozen in liquid nitrogen. The spinal cord was analyzed for biogenic amines by modifications of a previously reported method (Parent et al., 2001 (link)). Tissue was homogenized in ice-cold 0.1N perchloric acid containing EDTA (10 mg%) and ascorbic acid (50 μm). The homogenate was centrifuged and 10 µl of supernatant was used in the HPLC assay using an Atlantis dC18 column (Waters) and an electrochemical detector.
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3

HPLC-ELSD Analysis of Hemp Wax PCs

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The HPLC-ELSD analyses of PCs in the purified mixture from hemp wax were performed on an Agilent Technologies (Waldbronn, Germany) modular model 1260 Infinity II system, with a vacuum degasser, a quaternary pump and a thermostated column compartment [2 (link)]. The separation of the compounds of interest was carried out on an Atlantis™ dC18 column (150 × 3.0 mm, 3 μm, Waters, Milford, MA, USA). The mobile phase was composed of ACN (solvent A) and a mixture MTBE-MeOH 90:10 (v/v) (solvent B), under the following gradient: 0–1 min isocratic elution at 20% B; 1–16 min linear gradient from 20 to 45% B, which was held constant for 4 min; the column was finally brought to 20% B in 5 min. The flow-rate was 1.5 mL/min and the injection volume was 10 μL. The ELSD evaporator temperature was set at 35 °C, while nebulizer temperature was 30 °C. Nitrogen flow rate was set at 1.50 SLM. All the samples analyzed in this study were injected in duplicate.
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4

HPLC-MS Analysis of 8f-FAD and FAD

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For HPLC/MS measurements, an Agilent Technologies 1200 series (Santa Clara, CA) equipped with a G1379B degasser, G1312B binary pump SL, G1367C HiP-ALS SL autosampler, a G1314C VWD SL UV detector, G1316B TCC SL column oven, and a G1956B MSD mass selective detector was used. The mass spectrometer was operated in positive electrospray ionization mode. The analytes were separated on an Atlantis® dC18 column (5 μm, 4.6 × 250 mm, Waters) at 25 °C by using aqueous eluent (0.1% formic acid) and acetonitrile at a flow rate of 1.0 ml min−1. The column was equilibrated with 7% acetonitrile in water (0.1% formic acid), and the following gradient was used for analysis: 0–2 min, 7% acetonitrile; 2–10 min, 7–100% acetonitrile; 10–12 min, 100% acetonitrile; 12–14 min, 7% acetonitrile. 10 μl of 300 μm HPLC purified 8f-FAD or 300 μm FAD solution for control, dissolved in water, were injected for each run.
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5

Liquid Chromatography-Mass Spectrometry Quantification of Valsartan

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Liquid chromatographic separation was performed using an Agilent 1260 autosampler (Agilent Technologies Inc, Santa Clara, CA, USA). The temperature of the autosampler was maintained at 7°C, and 5 μL of each reconstituted sample was separated into components using a Waters Atlantis dC18 column (50 × 2.1 mm, 3 μm; Milford, MA, USA) at 35°C. An isocratic mobile phase was used, containing 10 mM ammonium formate (pH 2.7) and methanol (20:80, [v/v]), at a flow rate of 0.3 mL per min.
The components eluted from the column were delivered into an API 4500 triple quadrupole mass spectrometer (Applied Biosystems/MDS SCIEX, Foster City, CA, USA) with electrospray ionization in positive ion mode for ion production. The ion spray voltage was set at 5.5 kV, and the source temperature was set at 550°C. Multiple reaction monitoring was performed using nitrogen as the collision gas. Analytes were detected by monitoring the transitions 436.2 (Q1) → 291.0 (Q3) and 439.2 (Q1) → 294.0 (Q3) m/z, with a declustering potential of 28 V and collision energies of 23 V, for VST and IS, respectively. Nebulizer gas (Gas 1) at 40°C and heater gas (Gas 2) temperatures were both set at 70°C. For quantifying VST in the plasma samples, each peak area of VST was divided by that of the internal standard, and the ratio was compared with a calibration curve obtained using VST standard solution in the same manner.
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6

HPLC Analysis of Bioactive Compounds in DJS Extract

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The contents albiflorin, paeoniflorin, z-ligustilide, decursin, and nodakenin in the DJS water extract were analyzed using an HPLC instrument (Agilent Technologies, USA) with a Atlantis dC18 column (4.6 × 250 mm, 5 μm; Waters, USA). The mobile phase consisted of the solvents, distilled water (A) and acetonitrile with 0.1% formic acid (B). The following gradient was used: 0 min, A : B 90 : 10 (v/v); 20 min, A : B 75 : 25; 25 min, A : B 75 : 25; 30 min, A : B 50 : 50; 45 min, A : B 20 : 80; and 60 min, A : B 0 : 100. The mobile phase flow rate was 1.0 mL/min, the column temperature was 30°C, the injection volume was 10 μL, and UV detection was at 230 and 330 nm.
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7

Quantitative PUFA Profiling in Spinal Cord

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PUFAs were extracted from weighed samples of spinal cord using 100% ice cold methanol. Stable isotope-labeled standards (Arachidonic Acid-d8, and 9S-HODE-d4) were added at the time of extraction for absolute quantification. Tissue samples with the solvents were homogenized with Omni Bead Ruptor Homogenizer (OMNI International). MS analyses were conducted on a Thermo Fisher Q Exactive fitted with a PicoChip nanospray source (New Objective) and a PicoChip column (Waters Atlantis dC18 column; 150 µm × 105 mm; 3 µm particle). A 55-min water/acetonitrile/isopropanol/ammonium acetate gradient was run at the flow rate of 1 μl/min. Mobile phase A is acetonitrile/water (40:60) containing 10 mM ammonium acetate and mobile phase B is acetonitrile/isopropanol (10:90) containing 10 mM ammonium acetate. Data-dependent analyses were conducted using one full MS scan (70,000 resolution) followed by six tandem-MS scans with electrospray negative ion detection. Targeted-MS2 analyses were also performed to distinguish the isomers. Standard curves were generated for all targeted PUFAs using appropriate stable isotope labeled internal standards and authentic fatty acids. Quantitative results were obtained by reference of the experimental peak area ratios to the standard curves.
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8

INH Pharmacokinetics Analysis Protocol

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The INH concentration in the PK samples was measured via LC-MS/MS. The quantification method was partially validated with the method that uses human plasma and had a linear calibration range of 0.2–10 mg/mL (r2 > 0.99). The measurements were made as follows. Aliquots (50 µL) of the samples were well-mixed with 100 µL acetonitrile containing 1 µg moxiflorxaci-d4/mL as the internal standard and centrifuged at 9,000 ×g for 10 minutes at 4°C. Then 50 µL supernatant was mixed with 100 µL distilled water containing 0.1% formic acid. Chromatographic separation was carried out on a 150 × 2.0-mm, 3-µm Atlantis dC18 column (Waters, Milford, MA, USA) with a gradient mobile phase of 0.1% formic acid in distilled water and acetonitrile containing 0.1% formic acid, at a flow rate of 0.2 mL/min. Detection was carried out on an API 4000 triple-quadrupole mass spectrometer (AB SCIEX, Framingham, MA, USA) equipped with a turbo ion-spray source; the specific mass transfer of INH was m/z 138.0→121.0. A non-compartmental analysis was used to calculate INH PK parameters from the HFIM samples, using WinNonlin version 8.3. The data were visualized using R version 3.3.0 (R Foundation for Statistical Computing, Vienna, Austria) with the ggplot2 package (version 3.4.0).
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9

HPLC Analysis of Retinol and α-Tocopherol

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The HPLC system consisted of 1525µ binary HPLC pump and 2707 autosampler, both from Waters. Retinol and α-tocopherol were quantified with Jasco FP-920 fluorimetric detector (Jasco Co.). The samples were separated in an isocratic system with a 5-µm Atlantis dC18 column equipped with guard cartridge (5 µm, 150 mm × 3.0, Waters). The mobile phase, consisting of acetonitrile methanol, 80:20 (v/v), was added at a flow rate of 1.5 mL/min, with 5-µL injection volume. The effluent was monitored by means of fluorimetric detection (λex. = 340 nm, λem. = 472 nm for retinol, and λex. = 290 nm, λem. = 330 nm for α-tocopherol and internal standard), and analyzed with Empower software.
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10

In Vivo Tracing of 13C6-HGA Metabolism

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Hgd tm1a −/− (n = 4) and Hgd tm1a −/+ (n = 4) mice were injected with 13C6-HGA into the lateral tail vein, adjusted to body weight to achieve a final blood concentration of ~1 mmol/L. Under anaesthesia, venous tail bleeds were collected at time points post-injection, ranging from 2 to 60 min. Whole blood was centrifuged, and the supernatant removed and immediately frozen.
Non-targeted metabolic flux analysis was performed to trace metabolism of 13C6-HGA. Metabolic profiling was performed using a published mass spectrometric technique (44 (link)). Briefly, plasma was diluted 1:9 plasma:deionized water and HPLC performed on an Atlantis dC18 column (3 × 100 mm, 3 μm, Waters, UK) coupled to an Agilent (Cheadle, UK) 6550 quadrupole time-of-flight mass spectrometer. An accurate-mass compound database with potential association to HGA was generated for data mining using Agilent Pathways to PCDL. Data were mined for these compound targets with an accurate mass window of ± 5 ppm using ‘batch isotopologue extraction’ in ProFinder (build 08:00, Agilent). Isotopologue extraction investigates association with the injected 13C6-HGA by examining the relative abundances of the M + 0–M + 6 isotopologues for compound targets.
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