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9 protocols using fitc conjugated anti f4 80

1

Apoptosis Analysis of Peritoneal Cells

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Peritoneal cells were harvested from BALB/c mice. Analyses of apoptosis were performed as described elsewhere (34 (link)). The cells were then plated in 24-well plates at a density of 1 × 106 cells per well. If necessary, SNA (10 μg/ml) pretreatment was applied. A/WSN/1933 virus or UV-WSN virus was added to each well at a 1 × 106 pfu. After incubation at 37°C for different time periods, cells were harvested and stained with anti-FcγRII/III (Fc receptor blocker) before being stained with APCef780-conjugated anti-CD19 (Catalog No: 47-0193-80, eBioscience), PE-conjugated anti-CD23 (Catalog No: 12-0232-81, eBioscience), FITC-conjugated anti-B220 (Catalog No: 553088, BD Biosciences), FITC-conjugated anti-F4/80 (eBioscience), and BV421-conjugated anti-CD11b antibodies (Catalog No: 48-0112-80; eBioscience). After 1 h incubation at 4 °C, cells were washed with FACS buffer and stained with APC-conjugated Annexin V (Catalog No: 17-8007-74, eBioscience) for 15 min at room temperature. To exclude dead cells, stained cells were incubated with 10 μg/mL of PI (eBioscience, San Diego, CA, USA) or 7AAD (Catalog No: 51-68981E, BD Biosciences). The cells were analyzed with a FACSCantoTM II.
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2

Analyzing BMDM Surface Markers

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The following fluorescence-conjugated antibodies directed to cell surface markers were used: FITC conjugated anti-F4/80 (eBioscience, San Diego, USA), PE conjugated anti-CD11b (Milteny Biotec, San Diego, USA) and the relevant isotype controls (eBioscience). 1.2 × 106 cells per treatment were seeded in 60 mm Falcon culture plates for 24 hours in the presence or absence of DEX 0.1–1 μM or LPS 0.05 μg/ml. BMDM were then collected with 15 mM EDTA and incubated, protected from light, with the fluorescence-conjugated antibodies for 30 minutes at 4°C. Cells were then analyzed by a FACSort flow cytometer (Becton-Dickinson). Ten thousand total events were collected and gated by the expression of F4/80 and CD11b. Results were analyzed using Cyflogic software.
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3

Immunohistochemical Analysis of IL-33 in Lung

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Paraffin sections of lung were deparaffinized in xylene and hydrated through graded alcohols. Sections were incubated overnight at 4°C with anti-IL-33 antibody or anti-normal goat IgG as the control (R&D Systems Inc., Minneapolis, MN, USA). Streptavidin-biotin amplification (Dako, Denmark) was carried out for 30 minutes, and hematoxylin was used to counterstain. For immunofluorescence, sections were incubated overnight at 4°C with anti-IL-33 antibody, and Northern Light 557 conjugated anti-goat IgG (R&D Systems Inc.) was used as the secondary antibody. FITC-conjugated anti-F4/80 was used to identify tissue macrophages (eBioscience, San Diego, CA). Fluorescent images were visualized using a bio-imaging navigator microscope system (Olympus, Tokyo, Japan).
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4

Immune Cell Characterization Protocols

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RPMI 1640 medium, α-MEM, trichloroacetic acid (TCA), Ehrlich’s reagent and 1-methyl-DL-tryptophan (1-MT) were from Sigma-Aldrich (St. Louis, MO). Anti-IDO monoclonal antibody (clone 10.1) was from Upstate Cell Signaling Solutions (Lake Placid, NY). FBS was from Invitrogen (Carlsbad, CA). Recombinant mouse and human TNFα, IL-1β, IFNγ, and IL-2 were from R&D Systems (Minneapolis, MN). Anti-CD3 and anti-CD28 monoclonal antibodies were from R&D Systems. G418 was from Invitrogen. FITC-conjugated anti-CD3, PE-conjugated anti-CD19, FITC-conjugated anti-CD4, PE-Cy5-conjugated anti-CD8, FITC-conjugated anti- F4/80, PE-conjugated anti-NKG2D, and their respective isotypes were all from eBioscience (La Jolla, CA).
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5

Analyzing Placental and Splenic Immune Cells

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To analyze the populations of inflammatory cells within the placental tissue and spleen of pregnant mice, the mice were sacrificed under general anesthesia. Placental and splenic cells were
isolated from mice, as described previously [30 (link), 31 (link)]. The cells were washed, treated with erythrocyte lysis
buffer, and resuspended in PBS supplemented with 3% fetal bovine serum for flow cytometry analysis. Cells were labeled with the following antibodies purchased from eBioscience (San Diego,
CA, USA): phycoerythrin (PE)-conjugated anti-Ly6G (Cat 12-9668-82), PE-conjugated anti-CD11b (Cat 12-0112-82), FITC-conjugated anti-F4/80 (Cat 11-4801-82), and allophycocyanin-conjugated
anti-CD45 (Cat 17-0451-82). The cells were examined by flow cytometry using a NovoCyte flow cytometer (ACEA Biosciences Inc., San Diego, CA, USA).
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6

Multiparameter Flow Cytometry of Macrophages

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BMDMs were resuspended and stained with PE-Cy7-conjugated anti-CD11c (eBioscience clone N418, 25-0114), FITC-conjugated anti-F4/80 (eBioscience clone BM8, 11-4801), and PE-conjugated CD11b (BD Pharmingen, San Jose, CA, clone M1/70 553311). BD and eBioscience antibodies to CD45 were used as single-stained controls. Data were collected on a BD LSRFortessa flow cytometer running FACSDiva software and analyzed in FlowJo (TreeStar, Ashland, OR). Figures were made in Adobe Creative Suite (San Jose, CA).
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7

Quantifying Lung Immune Cell Populations

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Single‐cell suspensions of lung tissue were preincubated with FcγR‐specific blocking monoclonal antibody (2.4G2) and washed before staining. To quantify Th2 cells, single cells prepared from lung tissue were stimulated with phorbol 12‐myristate 13‐acetate (100 ng/ml), ionomycin (1 μg/ml), and Golgi stop, then pooled cells from mouse per group were stained with phycoerythrin/cy5 (PE/cy5)‐conjugated anti‐CD3 antibody and fluorescein isothiocyanate (FITC)‐conjugated anti‐CD4, PE‐conjugated anti‐IL‐13, or PE‐conjugated anti‐IL‐4 antibodies. For analysis of macrophages population, cells were stained with the following antibodies: Percp‐cy5‐conjugated anti‐CD45 (eBioscience), FITC‐conjugated anti‐F4/80 (eBioscience), allophycocyanin (APC)‐cy7‐conjugated anti‐CD11c (eBioscience), goat anti‐CD206 (R&D Systems Inc.), rabbit anti‐Ym‐1 (Stem Cell Technologies), APC‐conjugated anti‐goat IgG, or PE‐conjugated antirabbit IgG (eBioscience). Cells were analyzed on an LSRII flow cytometer (BD Biosciences) using FlowJo version 10 software (TreeStar, Inc.).
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8

Immunostaining of Macrophages and Tissue Sections

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Immunostaining was performed on cultured BMDMs and frozen sections of human and mouse tissues fixed by 2% paraformaldehyde following a previously described protocol.[18 ,
22 (link)
] In brief, sections were labeled overnight with various combinations of directly conjugated primary antibodies as follows: fluorescein isothiocyanate (FITC)‐conjugated anti‐CD68 antibody (sc‐20060 FITC, Santa‐cruz), FITC‐conjugated anti‐F4/80 (11‐4801‐81, eBioscience), Cy3‐conjugated α‐SMA antibody (C6198, Sigma), Runx1 (sc‐365644, Santa Cruz), p‐Runx1(Ser397) (PA5‐105609, Invitrogen) detected with APC (A21240, Invitrogen) or PE‐conjugated secondary antibodies (A11003, Invitrogen). Sections were washed and, in some cases, DNA was counterstained with DAPI and observed under a fluorescence microscope (Carl Zeiss Axio Observer Z1) or confocal microscope (Carl Zeiss LSM 880).
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9

Psoriasis Induction and Analysis Protocol

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Aldara ® (IMQ) 5% cream (MEDA Pharmaceuticals, Vienna, Austria) was used for inducing psoriatic skin changes in the mice. 1% rapamycin (Merck Calbiochem, Darmstadt, Germany) ointment was made by mixing 50 mg petroleum jelly with 10 μl of the corresponding rapamycin stock, 50 mg/ml. P-mTOR S2448 #2976 and P-S6 S235/6 #2211 antibodies were from Cell Signaling Technology, Frankfurt, Germany. Keratin 6 antibody (Ks6. KA12) from Thermo Scientific, Darmstadt, Germany and caspase-14 antibody (NB100-56126) was from Novus Biologicals, Wiesbaden, Germany. NIMP-R14 Ly-6G/C (ab2557) was from Abcam, Cambridge, UK. Fluorescein isothiocyanate (FITC)conjugated anti-CD3, phycoerythrin (PE)-conjugated anti-CD4, PE-conjugated anti-CD11c, allophycocyanin (APC)-conjugated anti-CD11b, FITC-conjugated anti-F4/80, APC-conjugated anti-B220, PE-conjugated anti-langerin, APC-conjugated anti-EpCAM all were from eBioscience, Darmstadt, Germany, while peridinin chlorophyll protein complex (PerCP/Cy5)-conjugated anti-Siglec-H was from Biolegend, Koblenz, Germany and PerCP-conjugated anti-CD8 was purchased from BD Bioscience, Heidelberg Germany.
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