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12 protocols using col x

1

Spinal Tissue Analysis for Degeneration

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After the animals were euthanized, the spinal tissue samples were collected and fixed in 4% paraformaldehyde. After decalcified with 10% EDTA solution for 3 weeks, spinal tissue sections were embedded in paraffin wax and cut into 3 µm thickness in the sagittal plane. To measure cartilage endplates breakdown, 10 successive slides from every 30 µm of spine tissue were stained with safranin O/fast green. The degree of degeneration in the intervertebral discs was rated separately by three persons blind to the experimental protocol using the disc degeneration assessment scoring system developed by Luo et al. (2013 (link)). For histochemistry, sections were deparaffinized and rehydrated and then blocked in 5% BSA at 37°C for 30 min. Then sections were incubated with the primary antibody (COL2 1:400, MMP3 1:400, Wuhan, China) (COL-X 1:1000 Abcam, Cambridge, United Kingdom) (Nrf2 1:200, GPX4 1:2000 Proteintech Group Wuhan, China) overnight at 4°C and then followed by secondary antibody (Servicebio, Wuhan, China). The Thermo Fisher Scientific light microscope (IX53; Olympus) was used to capture the images to observe the positive cells.
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2

Western Blot Analysis of Chondrogenic Markers

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Cells were extracted with cell lysis buffer [50 mM Tris (pH 7.6), 150 mM NaCl, 1% TritonX-100, 1% deoxycholate, 0.1% SDS, 1 mM PMSF, and 0.2% Aprotinin (Beyotime)]. After measuring protein concentration by BCA protein assay (Beyotime), equal protein amounts were mixed with 5×sample buffer (Beyotime) and boiled. These samples were resolved on 10% SDS-PAGE (sodium dodecyl sulfate polyacrylamide gel electrophoresis) and transferred onto PVDF (polyvinylidene fluoride) membrane by using semi-dry transfer method. After blocking in 10% nonfat dry milk in TBST (tris-buffered saline tween-20) for 2 h, blots were incubated with primary antibodies including Col II (rabbit polyclonal 1:500, Abcam), Sox9 (rabbit polyclonal 1:500, Abcam), Runx2 (rabbit polyclonal 1:500, Abcam), Col X (rabbit polyclonal 1:500, Abcam) and GAPDH (rabbit polyclonal 1:1,000, Abcam) at 4℃ overnight. After washing with TBST three times, blots were incubated with goat anti-rabbit secondary antibody (1:2,000, ZSGB-BIO) at room temperature for 1 h. GAPDH was used as loading control.
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3

Immunohistochemical Evaluation of Chondrogenic Markers

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Cells were fixed in 4% paraformaldehyde for 15 min, washed in phosphate-buffered saline (PBS), and treated with H2O2 (ZSGB-BIO Biotechnology, Beijing, China) for 10 min to inactivate endogenous peroxidase. After treatment with normal goat serum (ZSGB-BIO) at room temperature for 15 min, cells were incubated with primary antibody including Col II (rabbit polyclonal 1:500, Abcam), Sox9 (rabbit polyclonal 1:500, Abcam), Runx2 (rabbit polyclonal 1:500, Abcam) and Col X (rabbit polyclonal 1:500, Abcam) at 4℃ overnight. After washing with PBS, cells were incubated with biotinylated goat anti-rabbit (ZSGB-BIO) secondary antibodies for 30 min followed by washing and incubation with horseradish peroxidase (HRP) conjugated secondary antibody (ZSGB-BIO) for 15 min. The area of the immunocomplex was visualized using chromogen 3, 3’-diaminobenzidine (DAB) as substrate for 5 min. Cells were observed under Olympus fluoresence microscope (IX71). Image-Pro plus 6.0 software was used for image analysis.
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4

Multiparametric Immunophenotyping of Hepatocyte-like Cells

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After fixation with 4% paraformaldehyde, cells were blocked and permeabilized in 1% w/v bovine serum albumin (BSA, Sigma-Aldrich), 10% donkey serum (Life Technologies) and 0.1% Triton) for 30 min at RT. For nuclear antigens, cells were treated with 0.5% Triton (Sigma-Aldrich), then primary antibodies, CTNNB (mouse, 1:100; bdbiosciences), CK19 (rabbit, 1:500; abcam), HNF4a (rabbit, 1:100; abcam), AFP (mouse, 1:100; abcam) and ALB (goat, 1:100; Bethyl), ASGR1 (mouse, 1:100; Thermo Fisher Scientific), COL1 (rabbit, 1:500; abcam), Vimentin (rabbit, 1:200; abcam); CD44 (mouse, 1:200 abcam), CD31 (rabbit, 1:50; abcam); Col-X (mouse, 1:250; abcam), MRP2 (mouse, 1:200; abcam), ZO-1 (mouse, 1:100; abcam), CD26 (rabbit, 1:100; abcam), Pan-Cadherin (mouse, 1:100; Sigma), Claudin 1 (rabbit, 1:100; abcam), Occludin (mouse, 1:100; abcam), Stem121 (mouse, 1:100; Cellartis), phosphor-SMAD2/3 (rabbit, 1:100; Cell signalling technology) and GLI1 (rabbit, 1:100; abcam) were applied for overnight at 4 °C. After washes, cells were then incubated with Alexa 647, Alexa 568, Alexa 488 conjugated secondary antibodies or 488-Phalloidin (1:250; Life Technologies). Samples were counterstained with DAPI (NucBlue, Life Technologies). Confocal micrographs were captured using Nikon Ti spinning disk confocal microscope equipped with Andor Neo camera and images were processed by NIS-element software.
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5

Immunohistochemical Staining of Collagen

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In order to extract antigen for immunohistochemical staining, samples were dewaxed and incubated for 1 h at 37 °C with 0.4% pepsin (Roche). The samples were blocked for 0.5 h in 10% blocking serum. Following an overnight incubation with murine primary antibodies COL I, COL II, and COLX (Abcam, Cambridge, UK), they were incubated for 1 h with secondary antibodies. After incubation with 3,3′-diaminobenzidine (DAB) for color development, the samples were counterstained and fixed with hematoxylin.
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6

Immunofluorescence Analysis of Chondrocyte Spheres

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For immunofluorescence, frozen sections of chondrocyte spheres were washed with PBS for three times, these cell slices were permeabilized with cold 0.2% Triton X-100 (Sigma, USA) in PBS for 5 min. A step of enzymatic antigen retrieval with 0.1% Trypsin in PBS was performed prior to block for 1 h. After blocking, antibodies against Aggrecan (1:300; Abcam, UK), COL II (1:300; Abcam), SOX9 (1:200; Affinity), MMP13 (1:200; Affinity), COL X (1:500; Abcam), NANOG (1:300; Abcam), OCT4 (1:300; Abcam), TRA-1-60(1:300; Abcam) and Ki67 (1:300; Abcam) were added overnight. The following day, cells were washed three times with PBS and then incubated at 37 °C for 1 h with Alexa 594-conjugated goat anti-rabbit secondary antibody (1:300; Abcam) or Alexa 488-conjugated goat anti-mouse secondary antibody (1:300; Abcam). The cell nucleus was counterstained with DAPI (Beyotime, People’s Republic of China).
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7

Immunohistochemistry Analysis of Bone Proteins

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Paraffin sections of 4-week-old tibiae were rehydrated and digested in 0.1% trypsin for 10 min at the room temperature, and then treated with 3% H2O2 for 20 min. Sections were incubated with primary antibodies in PBS overnight at 4 °C. Col-X, MMP13, MMP9, cathepsin K, OPG, DKK1, and sclerostin antibodies were obtained from Abcam (Cambridge, MA, USA). Axin1 and β-catenin antibodies were obtained from Sigma (St. Louis, MO, USA). NFATc-1 and c-Fos antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Negative control sections were incubated with IgG (Beyotime Biotechnology, Shanghai, China). A Polink-2 plus polymer HRP detection kit (PV-9001, ZSGB-BIO, Shanghai, China) was used for incubation with secondary antibody and horseradish peroxidase (HRP)-streptavidin.
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8

Immunohistological Staining of Murine Articular Sections

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For immunohistological (IHC) staining, murine articular sections were deparaffinization and hydration, followed treated with parenzyme (0.25%) for 30 min. An additional 10-min treatment with H2O2 (3%) was also performed. Next, the sections were treated with goat serum (10%) for 20 min and incubated with primary antibodies at 4°C overnight. The secondary antibodies were selected based on the primary antibody host. Following visualization of the signals using the DAB kit, hematoxylin counterstaining was performed. During immunofluorescence (IF) staining, murine articular sections were treated at 97°C for 30 min using 1x sodium citrate, followed by deparaffinization and hydration, and a further 10-min treatment with H2O2 (3%) was performed. Then, the sections were treated with goat serum (10%) for 20 min and incubated overnight with primary antibodies at 4°C. After adding fluorescence-conjugated secondary antibodies; the sections were incubated with DAPI dye solution for 10 min at room temperature in the dark. The primary antibody of ACAN (Proteintech), MMP-13 (Proteintech), COL II (Santa), and COL X (Abcam). The sections were microphotographed using an Axiovert 40C optical microscope (Zeiss, Germany), and ImageJ software was used to quantify the percentage of the positive stained area in the total area.
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9

Chondrocyte Differentiation Assay

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Dulbecco's modified Eagle's medium and Ham's F-12 medium (DMEM/F12; Hyclone), fetal bovine serum (FBS; Gibco), penicillin-streptomycin (Invitrogen), 17β-Estradiol (Sigma-Aldrich), ERα antagonist methyl-piperidino-pyrazole (MPP; Sigma-Aldrich), ERβ antagonist 4-[2-phenyl-5,7-bis (tri-fluoro-methyl) pyrazolo [1,5-a] pyrimidin-3-yl] phenol (PHTPP; Sigma-Aldrich), dimethyl sulfoxide (DMSO; Invitrogen), Rabbit polyclonal antibody to Col II (Abcam) and Col X (Abcam), Rabbit polyclonal antibody to GAPDH (Abcam). Estradiol, MPP, and PHTPP were dissolved in DMSO according to manufacture protocol.
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10

Western Blot Analysis of Chondrocyte Markers

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The cells were lysed in radio immunoprecipitation assay (RIPA) buffer (Heart, Xi’an, China) with protease inhibitor and phosphatase inhibitor. Total protein concentrations of cell lysates were determined using the bicinchoninic acid (BCA) protein assay (Heart). A total of 30 μg protein was separated by 10% SDS-PAGE (sodium dodecyl sulfate-polyacrylamide gel electrophoresis) and transferred to polyvinylidene difluoride (PVDF) membranes (Millipore, Bedford, MA). Then membranes were blocked at room temperature for 2 hours in Tris-buffered saline with 0.5% Tween20 and 10% nonfat dry milk and incubated overnight at 4 °C with primary antibodies, anti-mouse MMP-10 (1:800; Abcam), Col X (1:1,000; Abcam), Col2a1 (1:1,000; Proteintech, Wuhan, China), Runx2 (1:1,000; Abcam), MMP-13 (1:1,000; Abcam), and GAPDH (1:2,000; BOSTER, Wuhan, China) antibodies separately. After washing with TBS-T, the membranes were incubated for 1 hour with the appropriate secondary antibody. Immunoreactivity was visualized using the ECL system (Amersham Biosciences, Piscataway, NJ). Signals were quantified using Image J software.
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