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8 protocols using lovastatin

1

Immune Profiling and Ferroptosis Assay

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Lovastatin (catalog HY-N0504) was purchased from MedChemExpress. Recombined active IFN-γ protein (catalog KGH2016) was purchased from KeyGEN (Nanjing, China). Mouse spleen lymphocyte separation kit (catalog P8860) and mouse tumor–infiltrating tissue lymphocyte separation kit (catalog P9000) were purchased from Solarbio. Liberase (catalog 5401020001), DNase I (catalog DN25), and type IV Collagenase (catalog C5138) were purchased from MilliporeSigma. The PD-1 in vivo mAb (catalog BE0273) was purchased from BioXCell. The inhibitor for ferroptosis, fer-1 (catalog T6500), was purchased from TargetMol. The BODIPY 581/591 C11 probe (catalog D3861) was purchased from Thermo Fisher Scientific. Antibodies used in the study and their source were exhibited in Supplemental Table 2.
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2

Antibodies and Inhibitors for TRABID Study

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The antibodies against TRABID were described previously37 (link). Other antibodies used in this study are listed in Supplementary Table 1. MG132 was purchased from Calbiochem. Rapamycin, Cycloheximide, Bafilomycin A1, and TRABID inhibitor NSC112200 were purchased from Sigma-Aldrich. Lovastatin, aphidicolin, RO-3306, nocodazole, cGAS inhibitor G140 and STING inhibitor C176 were obtained from MedChemExpress. Adenoviruses AdCre and AdLuc were obtained from Baylor College of Medicine Vector Develop Laboratory.
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3

Recombinant Protein Expression in E. coli

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Escherichia coli DH5α was used as the plasmid construction host, E. coli BL21 (DE3) was used as the protein expression host and the biosensor construction platform. Luria-Bertani (LB) medium (1% NaCl, 0.5% yeast extract, and 1% tryptone) was used for E. coli cultivation. When needed, antibiotics were added at required concentration. Simvastatin (ps) was purchased from Sigma-Aldrich, commercial simvastatin containing drug (cm) was purchased from a local pharmacy, lovastatin, mevastatin, pravastatin, and fluvastatin were purchased from MedChem Express.
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4

Molecular Regulators of Lipid Metabolism

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Deoxycholic acid and JTE-013 were obtained from Sigma-Aldrich (St. Louis, MO, USA). Triamterene, 4-DAMP, ketoconazole, lovastatin, KG-501 and fatostatin were purchased from MedChemexpress (Monmouth Junction, NJ, USA). Methoctramine was from AdooQ Bioscience (Nanjing, China). Z-Guggulsterone was from Santa cruz Biotechnology (Santa cruz, CA, USA). SREBP2 antibody was obtained from R&D Systems (Minneapolis, MN, USA).
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5

Metabolic Tracing of Carbon Sources

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PF-05175157 was provided by ChemicalBook, and lovastatin was obtained from MedChem Express. [U-13C]-glucose, [1,6-13C]-glucose, [3-2H]-glucose, [1-2H]-glucose, [6,6-2H]-glucose, and [U-13C]-glutamine were purchased from Cambridge Isotope Laboratories. Antimycin A, amino acids, pyruvate, oxaloacetate, α-ketoglutarate, citrate, malate, acetate, dimethyl α-ketoglutarate, triethyl citrate, dimethyl malate, and all general chemicals were obtained from Sigma unless otherwise described.
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6

Ferroptosis Modulation in Cell Lines

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HCM, C2C12 and HUVEC were cultured in high-glucose DMEM (Gibco BRL, USA) supplemented with 5% fetal bovine serum (Gibco BRL, USA) without antibiotics in acceptable conditions (5% CO2, 37°C). Ferrostatin-1 (Fer-1), deferoxamine mesylate (DFO), liproxstatin-1 (Lip-1), RSL3, Z-VAD-FMK and mitoTEMPO (MT) were purchased from Selleck (Selleck, China). Atorvastatin, lovastatin, pravastatin, and rosuvastatin were obtained from MCE (MedChemExpress, China). Fer-1, DFO, Lip-1, RSL3, Z-VAD-FMK and MT were dissolved in dimethylsulfoxide (DMSO) and diluted in a culture medium at ultimate concentrations (0.5 μM with RSL3; 1 μM with Fer-1; 80 μM with DFO; 1 μM with Lip-1; 10 mM with mitoTEMPO; and 2 μM with Z-VAD-FMK). Statins were stocked as 50 mM solutions in DMSO. Final concentrations ranged from 10 to 160 μM.
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7

Cell Culture and Reagent Preparation

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RKO and SW480 cells were cultured in DMEM containing 10% fetal bovine serum and
penicillin/streptomycin at 37°C in a 5% CO2 incubator. MVA (79849)
and GGPP (G6025) were from Sigma Aldrich (Shanghai, China). NSC23766, ML141,
CCG1423, and Y27632 2HCl were from Selleck Chemicals (Houston, TX, USA).
Lovastatin was from MedChemEx-press (Shanghai, China).
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8

Evaluating Apoptosis-Related Proteins by WB

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For Western blotting, we used primary antibodies for RAB38 (Cell Signaling Technology, Danvers, MA, USA; #14365), RAB32 (Sigma, St. Louis, MO, USA; #010m4795), OXPHOS (Abcam, Cambridge, MA, USA; #ab110411), C-Myc (Cell Signaling Technology, Danvers, MA, USA; #5605), Mcl-1 (Cell Signaling Technology, Danvers, MA, USA; #5453S), Bcl-2 (Cell Signaling Technology, Danvers, MA, USA; #4223), Bcl-xL (Cell Signaling Technology, Danvers, MA, USA; #2764S), and β-actin (Sigma, St. Louis, MO, USA; #076M4786V) and secondary antibodies for HRP-conjugated goat anti-mouse (Thermo Scientific, Waltham, MA, USA; #31430) and goat anti-rabbit (Thermo Scientific, Waltham, MA, USA; #31460). For cell death assays, the positive control staurosporine was obtained from Sigma-Aldrich (St. Louis, MO, USA; STS #S5921). For drug treatments, simvastatin was purchased from Selleckchem (Houston, TX, USA; #S1792), lovastatin from MedChemExpress (South Brunswick, NJ, USA; #HY-N0504), and ABT263 from Selleckchem (Houston, TX, USA; #S1001).
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