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13 protocols using facs aria 2 ow cytometer

1

Intracellular ROS Measurement by Flow Cytometry

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DCFH-DA uorescence dye was used to examine intracellular ROS accumulation. Brie y, LO2 cells were seeded in plates and treated with the miRNA-141-3p mimic and inhibitor. After incubation, DCFH-DA was added to serum-free culture medium, which was added to the cells and then incubated for 15 min in the dark at 37°C. For ow cytometry analysis, dichloro uorescein (DCF) uorescence intensity was measured using a BD FACSAria II ow cytometer (USA). For confocal laser scanning microscopy (CLSM), after DCFH-DA staining, cells were incubated with Hoechst for 15 min at 37°C, and ROS levels were observed under CLSM (ZESS, Germany) at 488 nm by comparing the uorescence intensity (green signal).
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2

Annexin V Apoptosis Assay in Adriamycin-Treated Cells

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The transfected cells were seeded in 6-well plates (5 × 10 5 cells/well) and treated with 1.0 mg/l adriamycin. The cells were then digested with trypsin (Gibco® trypsin-EDTA, Thermo Fisher Scienti c), washed thrice with PBS, suspended in 500 μl binding buffer, and then incubated withFITC Annexin V Apoptosis Detection Kit I (BD Biosciences, 556547) according to the manufacturer's protocol. The stained cells were detected using the BD FACS Aria II ow cytometer (BD Biosciences, Hercules, CA, USA).
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3

Apoptosis Evaluation by Flow Cytometry

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Transfected cells (1 × 10 6 cells/well) were plated in 6-well plates. After treatment, cells were collected by centrifugation at 1500 rpm for 5 min and then incubated with 5 μL of FITC-conjugated Annexin V and 5 μL of PI for 20 min in the dark at 4 °C. The stained cells were detected by the BD FACS Aria II ow cytometer (BD Biosciences, USA).
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4

Apoptosis Evaluation by Flow Cytometry

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Transfected cells (1 × 10 6 cells/well) were plated in 6-well plates. After treatment, cells were collected by centrifugation at 1500 rpm for 5 min and then incubated with 5 μL of FITC-conjugated Annexin V and 5 μL of PI for 20 min in the dark at 4 °C. The stained cells were detected by the BD FACS Aria II ow cytometer (BD Biosciences, USA).
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5

Phenotypic Analysis of Macrophages

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A phenotype analysis of the macrophages was performed with a BD FACS AriaII ow cytometer (BD, USA) as previously described [16] . Brie y, the cells were labeled with CD11b-FITC, F4/80-PE, and CD206-APC (eBioscience, San Diego, CA) following the manufacturer's protocol. To analyze the prevalence of M2 macrophages, the cells were incubated with PE-conjugated F4/80 antibodies or APC-conjugated CD206. Flow cytometry was performed using a FACS CaliburTM ow cytometer, and the data were analyzed using Paint-A-Gate software (Becton Dickinson).
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6

Apoptosis Evaluation by Flow Cytometry

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Transfected cells (1 × 10 6 cells/well) were plated in 6-well plates. After treatment, cells were collected by centrifugation at 1500 rpm for 5 min and then incubated with 5 μL of FITC-conjugated Annexin V and 5 μL of PI for 20 min in the dark at 4 °C. The stained cells were detected by the BD FACS Aria II ow cytometer (BD Biosciences, USA).
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7

Isolating Alveolar Macrophages from Lungs

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Segregated lung mononuclear cells were stained, subsequently, AMs (F4/80 + CD11c + ) were sorted using a FACS Aria II ow cytometer (Becton Dickinson, Franklin Lakes, NJ, USA). The purity of separated cells was more than ninety-ve percent.
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8

Sorting and Culturing GFP-Labeled Cells

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Sorting was performed on a FACS AriaII ow cytometer (Becton Dickinson) equipped with a 70 µm nozzle. 2 µm and 3.4 µm polystyrene beads (Spherotech) were used for size calibration. Before sorting, propidium iodide (PI) was added to the cell suspension to a nal concentration of 0.2-0.5 µg/ml. Then, pro les of dissociated cells from GFP-labeled strains were compared to pro les of cells from N2 worms to exclude auto-uorescent cells. Sorted cells were collected in 3 ml L-15/FBS medium in a 15 ml conical tube chilled on ice. For RNA extraction, sorted cells and whole worm control samples were collected by centrifugation in a swing-bucket centrifuge at 4400 rpm, 4 o C for 10 min. The supernatant was removed and 0.3 ml Trizol solution (Invitrogen) were added and stored at -80 o C. For culture, sorted cells were seeded onto a poly-D-lysine coated glass-bottom dish (MatTec) with daily changes of L-15/FBS buffer. Cells were visualized by confocal microscopy (Carl Zeiss, LSM780) with a 60 × oil lens.
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9

Liver-Infiltrating Cell Analysis

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We collected mouse liver-in ltrating cells owing through the portal vein after hepatectomy 16 .
Reconstructed human PBMCs in mice were analyzed by ow cytometry with monoclonal antibodies used for surface staining as described previously 12, 13 . Dead cells identi ed by light scatter and 7-AAD staining were excluded from the analysis. Flow cytometry was performed using a FACS Aria II ow cytometer (BD Bioscience, Franklin Lakes, NJ), and results were analyzed with FlowJo (BD Biosciences).
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10

Monocyte-Mediated Melanoma Immunotherapy

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Human peripheral blood mononuclear cells (PBMCs) of healthy donors were obtained from the CFAR Gene and Cellular Therapy Core Laboratory at UCLA, without identi cation information under federal and state regulations. Human monocytes were isolated from healthy donor PBMCs via magnetic-activated cell sorting (MACS) using human CD14 microbeads (Miltenyi Biotec, 130-050-201)followedby uorescenceactivatedcellsorting(FACS;sorted as hCD45 + hCD11b + hCD14 + cells) using a FACSAria II ow cytometer (BD Biosciences). Human A375 melanoma cells (10 x 10 6 cells per animal) and puri ed human monocytes (5 x 10 6 cells per animal) were mixed and s.c. injected into NSG mice to form solid tumours. Some experimental animals received i.p. injection of MAOI (phenelzine, 30 mg/kg/day) to block MAO-A activity. At the end of an experiment, tumour-associated immune cells were isolated foranalysis using ow cytometry.
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