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3 protocols using nbd s1p

1

Quantification of Sphingosine Kinase Activity

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The brains or cells were lysed in homogenization buffer containing 50 mM HEPES (GIBCO), 150 mM NaCl (Sigma-Aldrich), 0.2% Igepal (Sigma-Aldrich) and protease inhibitor (Calbiochem)26 (link). We performed the enzymatic activity measurements as previously described26 (link) using a UPLC (Ultra performance liquid chromatography) system (Waters). Briefly, 3 μl of the samples were mixed with 3 μl of SphK (200 μM NBD-sphingosine (Molecular Probes), 100 mM of HEPES buffer, pH 7.2, 10 mM MgCl2, 200 mM Semicarbodize, 1 mM 4-deoxpyridoxin, 2 mM Dithiothreitol, 1 mM ATP and 0.2% Igepal CA-630) assay buffer and incubated at 37 °C for 1 h. The hydrolysis reactions were stopped by adding 54 μl of ethanol, and centrifuged at 13,000 rpm for 5 min. Thirty microliters of the supernatant was then transferred to a sampling glass vial and 5 μl was applied onto a UPLC system for analysis. SphK activity was followed as phosphorylation of (7-nitro-2–1,3-benzoxadiazol-4-yl)-derythro (NBD)-sphingosine (Avanti Polar Lipids) to NBD-S1P. Quantification was achieved by comparison with NBD-S1P (Avanti Polar Lipids) standards.
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2

Quantitative SphK Activity Assay

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SphK activity was followed as phosphorylation of (7-nitro-2-1,3-benzoxadiazol-4-yl)-d-erythro (NBD)-sphingosine (Avanti Polar Lipids) to NBD-S1P as described previously39 (link) with modification using a UPLC (ultra performance liquid chromatography) system (Waters). Quantification was achieved by comparison with NBD-S1P (Avanti Polar Lipids) standards. Cell and tissue lysates were prepared as previously described7 (link). Values were expressed as percent of control.
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3

Sphingosine Kinase 1 Enzymatic Assay

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We confirmed S1P formation through SphK1 enzymatic activity measurements as previously described11 (link) using a UPLC (Ultra performance liquid chromatography) system (Waters). Briefly, 3 μl of SphK1 (Cayman, 10348) were mixed with 3 μl of assay buffer (200 μM NBD-sphingosine (Avanti Polar Lipids), 100 mM of HEPES buffer, pH 7.2, 10 mM MgCl2, 200 mM Semicarbazide, 1 mM 4-deoxpyridoxin, 2 mM Dithiothreitol, and 0.2% Igepal CA-630, all from Sigma-Aldrich) in the presence of 0–50 mM acetyl-CoA (Sigma-Aldrich, A2056), and the mixture were pre-incubated at 37 °C for 10 min. After pre-incubation, 1 mM ATP (Amresco, 0220) was added the mixture, and it was incubated at 37 °C for 1 h. The hydrolysis reactions were stopped by adding 53 μl of ethanol, and centrifuged at 15,493×g for 5 min. Thirty microliter of the supernatant was then transferred to a sampling glass vial and 5 μl was applied onto a UPLC system for analysis. S1P formation was followed as phosphorylation of (7-nitro-2-1,3-benzoxadiazol-4-yl)-d-erythro (NBD)-sphingosine (Avanti Polar Lipids) to NBD-S1P. Quantification was achieved by comparison with NBD-S1P (Avanti Polar Lipids) standards.
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