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6 protocols using anti il 22

1

Antibody Panel for Immunophenotyping

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We used rabbit anti-ESAT-6 antibody (Abcam, Cambridge, MA), mouse anti-His6X antibody (Sigma-Aldrich, St. Louis MA), anti-FLAG antibody (Sigma-Aldrich, St. Louis MA), HRP conjugated anti-mouse IgG (Bio-rad, Hercules, CA), anti-rabbit FITC conjugated secondary antibody (Jackson-ImmunoResearch, West Grove, PA) and anti-mouse Texas Red secondary antibody (Jackson-ImmunoResearch, West Grove, PA) for in vitro studies. For in vivo studies, anti-CD4 (clone: GK1.5)-FITC, -PerCP-Cy5 or -APC, anti-CD8 (clone: 53–6.7)-FITC, -PerCP-Cy5 or -APC, anti-CD44 (clone: IM7)-APC, anti-Brdu (clone: Bu20a)-PE, anti-CD11b (clone: M1/70)-APC, anti-CD11c (clone: N418)-APC, 7AAD, anti-IFN-γ (clone: XMG1.2)-APC, anti-IL-17 (clone: TC11-18H10.1)-PE, anti-IL-4 (clone: 11B11)-PE, anti-IL-6 (clone: MPS-20 F3)-PE, anti-IL-12 (clone: C15.6)-PE, anti-IL-22 (clone: Poly5164)-PE, anti-IL-10 (clone: JES5-16E3)-PE, anti-IL-9 (clone: MH9A4)-PE, anti-TNF-α (clone: MP6-XT22)-PE, (all from Biolegend, USA) and anti-CD69 (clone: H1.2 F3)-PE (from eBiosciences, USA) were used.
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2

Comprehensive Immune Cell Phenotyping

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Cells were pre-incubated with 1 µg/ml of FcR blocker [Miltenyi-Biotech]. For intracellular cytokine staining, cells were first stimulated with PMA [0.1 µg/ml] and ionomycin [1 µg/ml] in the presence of Brefeldin A [3 µg/ml] for 4 h at 37°C before being surface-stained, fixed, and permeabilised [eBioscience kit]. The following antibodies were used for flow cytometry staining: intracellular staining panel including anti-CD45, anti-CD3, anti-CD8, anti-IL-17A, anti-IL-22, anti-TNF-α [all from Biolegend], and anti-IFN-γ [eBioscience] antibodies; CCR panel including anti-CXCR3 and anti-CCR4 [BD Biosciences], anti-CCR6 and anti-β7 [Biolegend], anti-CCR9 [eBioscience] and anti-CCR10 [R&D Systems] antibodies; ILC panel including anti-lineage [CD34, TCRαβ, TCRγδ, BDCA-2, FCεR1a, CD123, CD1a, CD11c, CD14, CD3, CD19, CD16], anti-CD45, anti-c-Kit, anti-CRTH2, anti-CD127 [all from Biolegend], anti-CD56 and anti-CD94 [BD Pharmingen]. All antibody cocktails contained a fluorescent dye [Invitrogen/Life technologies] to discriminate dead cells during analysis. Stained cells were acquired on an LSRII flow cytometer and analysis was performed using FlowJo software [Tree Star]. For critical discrimination, cell populations were gated against corresponding isotype or fluorescence minus one [FMO] control antibody panels.
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3

Multiparameter Flow Cytometry of Esophageal Immune Cells

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Human fluorochrome-conjugated antibodies, anti-CD127, anti-CD4, anti-CD3, anti-CD11c, anti-Siglec-8, anti-IL17A, anti-IFNγ, anti-TNF-α, anti-IL22, anti-FOXP3, anti-IL10 all were purchased from BioLegend. Additional anti-human CD3 and anti-human CD4 were used from BD Biosciences. Anti-human IL-22BP antibody (clone 87554) and IgG2B isotype control were obtained from R&D Systems. To identify dead cells, 7-AAD staining (BioLegend) was performed. For extracellular staining, isolated hematopoietic cells from esophageal tissues were incubated for 20 min at 4 °C. Cells were acquired on a LSRII Fortessa flow cytometer (BD). Data were analyzed with FlowJo software (Treestar).
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4

Multiparametric Flow Cytometry Analysis

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Samples were stained with fluorescence-conjugated antibodies and analyzed using FACS Calibur and Cellquest software or using BD LSR Fortessa and FACS Diva software (Becton Dickinson). All data acquired from flow cytometry was analyzed using FlowJo software (TreeStar). The following antibodies were purchased from eBioscience and BioLegend: anti-CD45 (30-F11), anti-TCR-β (H57-597), anti-TCRγδ (GL3), anti-CD8α (53–6.7), anti-CD8β (eBioH35-17.2), anti-CD4 (RM4-5), anti-CD103 (2E7), anti-Foxp3 (FJK-16s), anti-T-bet (eBio4B10), anti-IL-17A (TC11-18H10.1), anti-IL-22 (IL22JOP), anti-IFN-γ (XMG1.2), anti-IL-10 (JES5-16E3), anti-IL-9 (RM9a4), anti-IL-4 (11B11), and viability stain kit (Zombie Yellow™ Fixable Viability Kit, BioLegend). Cells were fixed and permeabilized using Foxp3/Transcription Factor Staining Buffer (eBioscience) prior to transcription factor staining and intra-nuclear staining. Intracellular cytokine staining was performed after 3.5 h stimulation using 25 ng/ml of Phorbol 12-myristate 13-acetate (PMA, Sigma-Aldrich), 3 μM of Ionomycin (Sigma-Aldrich), and 1 μg/ml of Brefeldin A (GolgiPlug™ BD Bioscience). Stimulated cells were permeabilized using Cell Fixation/Permeabilization Kits (BD Bioscience) following the instruction from manufactures.
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5

Multiparametric Flow Cytometry Analysis

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We used the following antibodies: anti-CD4 (clone: GK1.5)-FITC, -PerCP-Cy5, or -APC, anti-CD8 (clone: 53-6.7)-FITC, -PerCP-Cy5, or -APC, anti-CD44 (clone: IM7)-APC, anti-BrdU (clone: Bu20a)-PE, 7AAD, anti-IFN-γ (clone: XMG1.2)-APC, anti-IL-17 (clone: TC11-18H10.1)-PE, anti-IL-4 (clone: 11B11)-PE, anti-IL-6 (clone: MPS-20F3)-PE, anti-IL-12 (clone: C15.6)-PE, anti-IL-22 (clone: Poly5164)-PE, anti-IL-10 (clone: JES5-16E3)-PE, anti-IL-9 (clone: MH9A4)-PE, anti-TNF-α (clone: MP6-XT22)-PE (all from Biolegend, USA), anti-Active Caspase-3 (clone: C92-605)-FITC or -PE (from BD Pharmingen™, USA), and anti-CD69 (clone: H1.2F3)-PE (from eBiosciences, USA).
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6

Multiparametric Flow Cytometry of CD40+ Cells

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Flow cytometric analysis was used to measure the number of CCR1-, IFN-γ-, T-bet-, IL-17A-, RORγt, IL-22-, and TNF-α-expressing CD40+ cells in the PMBCs. Briefly, PBMCs were stimulated with PMA/ionomycin (Sigma-Aldrich, St. Louis, MO, USA) in the presence of a Golgi stop (BD Bioscience, San Jose, USA), as previously described [12 (link),98 (link)]. PBMCs were washed and surface-stained with anti-CCR1 and anti-CD40 antibodies (BioLegend, San Diego, CA, USA). For the staining of cytokines and transcription factors, the cells were fixed, permeabilised, and stained for anti-IFN-γ, anti-T-bet, anti-IL-17A, anti-RORγt, anti-IL-22, and anti-TNF-α (BioLegend, San Diego, CA, USA). Human lymphocytes were isolated from the other immune cells (monocytes and granulocytes) using a conventional gating strategy based on their physical properties (forward and side scatter) to determine different immune markers in the lymphocytes. Chemokine receptors, inflammatory mediators, and transcription factors were identified based on the immunofluorescence characteristics of the antibody-labelled cells in the lymphocyte gate. The proportions of CD40+CCR1+, CD40+IFN-γ+, CD40+T-bet+, CD40+IL-17A+, CD40+RORγt+, CD40+IL-22+, and CD40+TNF-α+, cells were determined in the lymphocyte gate. Flow cytometry was conducted using an FC500 flow cytometer with CXP software (Beckman Coulter, Brea, CA, USA).
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