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12 protocols using ab192591

1

Immunofluorescence Visualization of ORMDL3 and p-PERK

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Cells were fixed with 4% paraformaldehyde, permeabilised with 0.5% Triton X‐100 in PBS for 15 min at room temperature and blocked with 5% BSA for 30 min at 37°C. Cells were treated with primary antibodies at 4°C overnight: ORMDL3 (ab211522, 1:200, Abcam) and p‐PERK (ab192591, 1:200, Abcam). Cells were then incubated with Cy3‐conjugated goat anti‐rabbit (A0516, Beyotime, 1:500) or goat anti‐mouse IgG DyLight 488‐conjugated secondary antibodies (A0428, Beyotime, 1:500) for 2 h at 37°C. Nuclei were stained with DAPI and cells were observed under a fluorescent illumination microscope (Olympus IX71).
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2

Investigating UPR Pathway Regulation

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Antibodies against GRP78 (ab21685), ATF6 (ab122897), p-PERK (ab192591) and p-eIF2α (Ser51) (ab32157) were obtained from Abcam (Cambridge, UK). Antibodies against total PERK (sc-13073) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). Antibodies against p-IRE1 (S724) (CY5605), eIF2α (AB3335), and β-actin (AB0061) were purchased from Abways Technology (Shanghai, China). Antibodies against total IRE1 (3294S) were purchased from Cell Signaling Technology (Danvers, MA, USA). Thapsigargin (Tg) (Abcam, ab120286), GSK2606414 (HY-18072) (MedChem Express, Monmouth Junction, NJ, USA), APY29 (HY-17537) (MedChem Express, Monmouth Junction, NJ, USA) and 4μ8C (HY-19707) (MedChem Express, Monmouth Junction, NJ, USA) were dissolved in DMSO.
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3

Immunohistochemical Analysis of HCC Tissues

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The HCC tissues were embedded in paraffin, dewaxed, and hydrated before the sections were treated with 50 μL primary antibody, rabbit anti-human antibodies against KI67 (1:500, ab15580, Abcam), MDK (1:50, ab52637), and pERK (1:50, ab192591) at 4°C overnight. Afterwards, the sections were re-probed with the secondary antibody for 15 min at 37°C, incubated with horseradish peroxidase-conjugated streptomyces ovalbumin solution (40 μL) at 37°C for 15 min, developed with 3,3-diaminobenzidine solution and stained with hematoxylin. The slides were finally observed under 5 fields of a microscope. The cells presenting brown or brownish yellow in the nucleus were deemed as KI67 positive cells.
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4

Immunohistochemical Analysis of MAPK Signaling

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The sections of colon tissue were deparaffinized by xylene, hydrated with gradient ethanol, incubated with 0.1% Tritonx-100 for 30 min, and rinsed 3 times with PBS for 5 min each. The sections were blocked by 5% BSA and 10% sheep serum successively for 30 min. The sections were incubated separately with primary antibody ERK1/2 (ab17942, Abcam), p-ERK (ab192591, Abcam), p38 (ab31828, Abcam), p-p38 (ab47363, Abcam), JNK (ab208035, Abcam), and p-JNK (ab124956, Abcam) in a wet box at 4°C overnight, washed 3 times with PBS for 5 min per time and second antibody at 37°C for 40 minutes, and washed with PBS 3 times for 5 minutes per time. Horseradish peroxidase-labeled streptavidin protein was added dropwise at 37°C for 40 minutes. The sections were rinsed 3 times with PBS for 5 minutes each time, developed by DAB, microscopically observed, and photographed.
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5

Evaluating Cellular Stress Response Pathways

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Antibodies against UBQLN1 (ab3341), p53 (ab32389), PERK (phosphor T982, ab192591), and IRE1 (phosphor S724, ab226974) were obtained from Abcam (Cambridge, UK). Anti-PERK (#3192), IRE1a (#3294), CHOP (#5554), Bax (#2772), Bcl-2 (#3498), Caspase-3 (#9662), mTOR (#2972), phosphor-mTOR (#2974), S6K (#9202), and phosphor-S6K (#9206) antibodies were purchased from Cell Signaling Technology ((Beverly, MA, USA). Anti-tubulin antibody (SAB4200715) and conventional reagents were purchased from Sigma-Aldrich (Boston, USA).
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6

Immunofluorescence Analysis of Cellular Stress Markers

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The cells were seeded in a 24-well plate (5 × 104 cells/well) with cell climbing slides overnight, and fixed in 4% paraformaldehyde. Immunofluorescence staining was carried on with Rabbit monoclonal anti-p-PERK (p-T982, ab192591, Abcam, 1:80) and mouse monoclonal anti-CHOP antibody (66741-1-Ig, Proteintech, 1:50) and corresponding second antibody with red/green fluorescence light were used, according to the previous method [37 (link)].
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7

Western Blot Analysis of Neuronal Signaling

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Primary cortical neurons or brain tissues were lysed with RIPA buffer containing phosphatase and protease inhibitors. After measurement with BCA kits, the proteins were denatured by boiling for 10 min and then loaded on 8-12% SDS‒PAGE gels, followed by transfer from the gels to activated PVDF membranes. After blocking with 5% nonfat dry milk, the membranes were incubated with the following primary antibodies: anti-PI3K (ab154598, 1:2000), anti-p-Akt (ab38449, 1:1000), anti-Akt (ab283852, 1:2500), anti-GRP78 (ab21685, 1:3000), anti-p-PERK (ab192591, 1:1000), anti-PERK (ab79483, 1:2500), and anti-p-IRE1α (ab124945, 1:2500) were obtained from Abcam, USA and anti-IRE1α (#3294, 1:2500), anti-ATF6 (#65880, 1:2000), anti-CHOP (#5554, 1:2000), anti-Caspase12 (#35965, 1:2500), anti-Caspase3 (#9579, 1:1000), anti-Bcl-2 (#3869S, 1:2000) and anti-Bax (#5023, 1:2500) were supplied by Cell Signaling Technology, U.S.A. Anti-β-actin antibody (GB15004, 1:3000) was purchased from Servicebio Technology (China). After incubation with the primary antibodies overnight, the membranes were washed three times with TBST and incubated with secondary anti-rabbit HRP antibody (GB1213, 1:5000, Servicebio Technology, China). Enhanced chemiluminescence was used to visualize the membranes, and the analysis was performed using ImageJ software.
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8

Protein Expression Analysis by Western Blot

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To analyze the protein expression levels of specific genes, treated cells were lysed using iced lysis buffer including protease and phosphatase inhibitors (Roche Diagnostics). The protein concentration was examined with a BCA protein assay kit (Thermo Fisher Scientific, Inc.). Protein samples were separated by 10% SDS-PAGE and then transferred onto PVDF membranes (Invitrogen; Thermo Fisher Scientific, Inc.). TBST containing 5%-skim milk was utilized to block the membranes for 2 h at room temperature. Subsequently, the membranes were incubated with specific primary antibodies at 4°C overnight, followed by incubation with HRP-conjugated secondary antibodies (1:3,000, ab6721; Abcam). The following specific primary antibodies were used: ERK (1:1,000, ab17942), p-ERK (1:2,000, ab192591), E-cadherin (1:2,000, ab133597), N-cadherin (1:1,000, ab76011), Vimentin (1:1,000, ab137321) and GAPDH (1:1,000, ab9485) (all from Abcam). The protein was visualized with ECL western blot detection reagents (Beyotime Institute of Biotechnology). GAPDH was an internal control.
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9

Endoplasmic Reticulum Stress Pathway

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Antibodies against phosphorylated (p)-protein kinase R-like ER kinase (PERK; ab192591), PERK (ab79483), inositol-requiring kinase 1α (IRE1α; ab37073), p-IRE1α (ab48187), activating transcription factor 6α (ATF6α), p-50ATF6α (ab37149), glucose-regulated protein 78 (GRP78; ab21685), CCAAT/enhancer binding protein homologous protein (CHOP; ab11419), p-c-Jun N-terminal kinase (JNK; ab124956), JNK (ab179461) and caspase-3 (ab13847) were purchased from Abcam (Cambridge, UK). N-acetyl L-cysteine (NAC), 4-phenylbutyric acid (4-PBA) and thap-sigargin (Thap) were also purchased from Abcam. The Annexin V-fluorescein isothiocyanate (FITC) apoptosis detection kit was purchased from Roche Diagnostics (Indianapolis, IN, USA). Cell Counting kit-8 (CCK-8) and 2′,7′-dichlorofluorescein diacetate (DCFH-DA) were purchased from Beyotime Institute of Biotechnology (Shanghai, China). SW (osmolality, 1,300 mmol/l; pH 8.2; relative density 1.05; salt content, 34.421%; NaCl, 26.518 g/l; MgSO4, 3.305 g/l; MgCl2, 2.447 g/l; CaCl2, 1.141 g/l; KCl, 0.725 g/l; NaHCO3, 0.202 g/l; and NaBr, 0.083 g/l) was prepared based on the overall composition of the East China Sea, which was provided by the Chinese Ocean Bureau (Beijing, China).
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10

Western Blot Analysis of Kinase Signaling

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Total proteins inside cells were extracted utilizing lysis buffer (38733; Sigma‐Aldrich). A total of 30–50 μg protein was separated utilizing 10% sodium dodecyl sulfate‐polyacrylamide gel electrophoresis and electronically transferred to polyvinylidene difluoride membranes (IPFL00010; Millipore). Subsequently, immunoblotting was applied utilizing rabbit monoclonal antibodies against MEK2 (ab32517), p‐MEK2 (ab278564), ERK (ab279084), p‐ERK (ab192591), and GAPDH (ab8245'; Abcam). The blots were then visualized utilizing a chemiluminescence detection system (Amersham Pharmacia Biotech).
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