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20 protocols using anti cd31 microbead

1

Isolation and Purification of Lymphatic Endothelial Cells

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Single-cell solutions were obtained from CLVM and LM tissues by digesting with 0.04% dispase (Gibco), 0.25% collagenase II (Roche) and 0.01% DNAse I (Roche) for 1 h at 37 °C. Separated cells (= mixed cells) were seeded on fibronectin-coated flasks (2 μg/cm2) (Millipore) and grown in ECGM2 (Bio-Connect life sciences) for CLVM isolated cells and ECGM-MV2 (Bio-Connect life sciences) for LM isolated cells, both supplemented with penicillin–streptomycin. When mixed cells reached a confluency of 80%, they were detached using Accutase (Sigma). Mixed CLVM cells were sorted for CD31-positive cells using Anti-CD31 MicroBeads (Miltenyi). To obtain LECs, we performed a fibroblast depletion using Anti-fibroblast MicroBeads (Miltenyi) as well as CD34-positive blood EC depletion using Anti-CD34 MicroBeads (Miltenyi), followed by a CD31-positive selection using Anti-CD31 MicroBeads. All different selected cells were plated on fibronectin-coated flasks (2 μg/cm2). Cell morphology was confirmed using a bright field microscope (Zeiss).
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2

Enrichment and Analysis of Testicular Cell Types

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For Amh-cre; Scffl/fl and control mice, whole testicular cells were prepared by an enzymatic digestion and centrifugation protocol that enriches Sertoli cells (Bernardino et al., 2018 (link)). For KitcreER; Scffl/fl and Cdh5creER; Scffl/fl mice, biotin anti-c-Kit microbeads (BioLegend, 105803, MACS, 130-090-485) and anti-CD31 microbeads (Miltenyi Biotec, 130-097-418) were used to enrich c-Kit+ and Cdh5+ cells, respectively. For SmacreER; R26tdTomato; Scffl/fl, Tcf21creER; R26tdTomato; Scffl/fl, and their control mice, SMA+ and Tcf21+ stromal cells were purified by fluorescence-activated cell sorting based on Tomato expression (purity >90%). For Cdh5creER; R26Scf and control mice, whole testicular cells were prepared without enriching any specific cell types. Proteins (from no fewer than 200,000 cells) were extracted using the Minute™ Total Protein Extraction Kit (Invent Biotechnologies, SD-001), separated by 10% SDS-PAGE gel, and blotted with anti-SCF antibody (Abcam, ab64677). Images were obtained with a MiniChemi 610 chemiluminescent imager (Sage Creation, Beijing, China). Quantification analyses of the western blots were performed using ImageJ.
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3

Isolation and Analysis of Thymic Stromal Cells

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Digested thymuses(34 (link)) were depleted of CD45+ cells using anti-CD45 microbeads (Miltenyi Biotech), in conjunction with LD columns. Cells were stained with antibodies to CD45 (30-F11), EpCAM1 (G8.8), TER-119 (TER-119) and podoplanin (8.1.1), and CD45-EpCAM1+ TEC and CD45-EpCAM1-podoplanin+ mesenchyme were FACS sorted using a MoFlo XDP (Beckman Coulter). CD31+ endothelial cells were sorted using anti-CD31 microbeads (Miltenyi Biotech) and MS columns, according to the manufacturer’s instructions. Sorted populations were analysed by qPCR for expression of the indicated genes exactly as described (36 (link)). Primer sequences are as follows:
Actb (NM_007393) QuantiTect Mm_Actb_1_SG PRIMER Assay (Qiagen QT00095242);
Ccl19 NM_(011888.2) Forward sequence GCTAATGATGCGGAAGACTG, reverse sequence ACTCACATCGACTCTCTAGG;
Ccl21a (NM_011124.4) Forward sequence ATCCCGGCAATCCTGTTCTC, Reverse sequence GGGGCTTTGTTTCCCTGGG;
Ccl25 (NM_009138.3) Forward sequence TTACCAGCACAGGATCAAATGG, Reverse sequence CGGAAGTAGAATCTCACAGCA,
Cxcl12 (NM_021704.3) Forward Sequence GCTCTGCATCAGTGACGGTA, Reverse sequence TGTCTGTTGTTGTTCTTCAGC,
Kitl (NM_013598.2) Forward sequence CCCTGAAGACTCGGGCCTA, Reverse sequence CAATTACAAGCGAAATGAGAGCC;
Selp (NM011347.2) Forward Sequence CATCTGGTTCAGTGCTTTGATCT, Reverse sequence ACCCGTGAGTTATTCCATGAGT.
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4

Isolation of Liver Endothelial Cells and Hepatocytes

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Liver ECs and hepatocytes were isolated as described with minor modifications.52 (link) Briefly, mice were anesthetized with avertin and perfused with D-Hanks through the portal vein, followed by perfusion with Hanks buffer containing 0.2 mg/mL of collagenase intravenously (Sigma-Aldrich, C5138). The liver was removed and placed in Hank’s buffer with gently agitation, and the cell suspensions were filtered through a 70 μm nylon mesh, centrifuged at 68 g for 5 minutes at 4 °C. The precipitations contain mostly hepatocytes. The supernatant was further centrifuged at 350 g for 5 minutes. The cell pellets were resuspended with Macks Buffer (D-Hanks + 0.5% BSA+2 mM EDTA). Liver EC were then isolated by magnetic-activated cell sorting using anti-CD31 MicroBeads (Miltenyi Biotech, Germany) according to the manufacturers’ instructions. The purity of liver EC was confirmed by qPCR compared with whole liver, hepatocytes, supernatants, and flow-through using different cell markers.
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5

Isolation and Analysis of Thymic Stromal Cells

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Digested thymuses (34 (link)) were depleted of CD45+ cells using anti-CD45 microbeads (Miltenyi Biotec), in conjunction with LD columns. Cells were stained with Abs to CD45 (30-F11), EpCAM1 (G8.8), TER-119 (TER-119), and podoplanin (8.1.1), and CD45EpCAM1+ thymic epithelial cells (TEC) and CD45EpCAM1podoplanin+ mesenchymes were FACS sorted using a MoFlo XDP (Beckman Coulter). CD31+ endothelial cells were sorted using anti-CD31 microbeads (Miltenyi Biotec) and MS columns, according to the manufacturer’s instructions. Sorted populations were analyzed by quantitative PCR (qPCR) for expression of the indicated genes exactly as described (36 (link)). Primer sequences are as follows: Actb (NM_007393) QuantiTect Mm_Actb_1_SG primer assay (Qiagen QT00095242); Ccl19 NM_(011888.2), forward, 5′-GCTAATGATGCGGAAGACTG-3′, reverse, 5′-ACTCACATCGACTCTCTAGG-3′; Ccl21a (NM_011124.4), forward, 5′-ATCCCGGCAATCCTGTTCTC-3′, reverse, 5′-GGGGCTTTGTTTCCCTGGG-3′; Ccl25 (NM_009138.3), forward, 5′-TTACCAGCACAGGATCAAATGG-3′, reverse, 5′-CGGAAGTAGAATCTCACAGCA-3′; Cxcl12 (NM_021704.3), forward, 5′-GCTCTGCATCAGTGACGGTA-3′, reverse, 5′-TGTCTGTTGTTGTTCTTCAGC-3′; Kitl (NM_013598.2), forward, 5′-CCCTGAAGACTCGGGCCTA-3′, reverse, 5′-CAATTACAAGCGAAATGAGAGCC-3′; Selp (NM011347.2), forward, 5′-CATCTGGTTCAGTGCTTTGATCT-3′, reverse, 5′-ACCCGTGAGTTATTCCATGAGT-3′.
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6

Isolation of Murine Lung Endothelial Cells

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Seven to eight-week-old WT and EC-Sirt1 cKO mice lungs were minced and digested with 3 mg/ml of collagenase II at 37°C for 45 min, stirring every 15 min. The digested tissues were passed through a 21 G cannula attached to a 20-ml syringe and filtered through a 40-μm cell strainer on top of a 50-ml Falcon tube that contained serum-containing isolation buffer for stopping digestion. After centrifugation at 300 × g at 4°C for 10 min, the ECs in the cell pellets were isolated using anti-CD31 Microbeads and the MACS system (Miltenyl Biotec, Bergisch Gladbach, North Rhine-Westphalia, Germany) according to the manufacturer’s instructions.
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7

Isolation and Activation of Naive T Cells

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PBMCs from adult leukocyte reduction filters [21 (link),22 (link)], CB samples, and peripheral blood were isolated by Ficoll gradient centrifugation (Biochrom, Berlin, Germany). CD4+CD45RA+CD31+ naive T cells were enriched, using a CD4+ T cell Isolation Kit II and AutoMACS (magnetic-assisted cell sorting) (Miltenyi Biotec, Bergisch-Gladbach, Germany) followed by negative selection by CD45RO Micro Beads and positive selection by anti-CD31 Micro Beads (Miltenyi Biotec) The purified CD45RA+ fractions contained 95–97% CD45RA+ cells, and the purified CD31+ fractions contained 87–99% CD31+ T cells. The cells were cultivated at 37°C in RPMI 1640 medium (Biochrom, Berlin, Germany), supplemented with penicillin-streptomycin and with 10% human AB-plasma. A total of 2×106 T cells/ml were loaded with anti-CD3 Ab (0.5 μg/ml) plus anti-CD28 Ab (0.5 μg/ml) for two minutes, then stimulation was performed by cross-linking the Abs with 10 μg/ml goat anti-mouse IgG (GAMIg) (Invitrogen, Darmstadt, Germany).
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8

Isolation and Culture of Mouse Choroidal Endothelial Cells

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Mice were killed (as described above) and eyes were removed and placed in ice‐cold medium before dissection. The choroid/RPE complex was separated from the retina and cut into approximately 1 mm × 1 mm pieces after removing the cornea and lens from the anterior of the eye. These choroid/RPE pieces were placed in growth factor‐reduced Matrigel™ (354230, BD Bioscience) and were seeded in 24‐well plates. Medium was changed every 48 h. After 6 days of incubation, the Matrigel™ embedding the choroid explants was dissolved by dispase (354235, BD Bioscience) at 37°C for 40 min. The sprouts were separated after removing the choroidal tissue from the medium. The cell buffer was transferred and passed through 70‐μm nylon filters (08‐771‐2, Fisher Scientific) to ensure a single‐cell suspension. CD31‐positive cells were then isolated using anti CD31‐MicroBeads (130‐097‐418, Miltenyi Biotec, MA, USA) based on the manufacturer's protocol, and purity was confirmed by flow cytometry. Purified MCECs were collected and cultured for further experiment.
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9

Isolation and Culture of Mouse Lung Endothelial Cells

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ECs were isolated from lungs and cultured in vitro, based on published protocols with some minor modifications (18 , 19 (link)). Briefly, the mouse was anesthetized and 5 mL cold PBS was injected via the right ventricle to flush the blood out. One milliliter of collagenase A (2 mg/mL, Roche, Indianapolis, IN, USA) was infused into the lung through the trachea. The lung was removed and then incubated with 10 mL of collagenase A at 37°C for 30 min. After the incubation, PBS was added to the tube, and the tube was vigorously shaken to dissolve the lung. The resulting cell suspension was filtered through a 40 μm strainer and centrifuged for 5 minutes at 1,500 rpm. After removal of the supernatant, the cell pellet was subjected to magnetic bead sorting using anti-CD31 microbeads (Miltenyi Biotec., Auburn, CA, USA) according to the manufacturer’s protocol. The resulting cells were plated onto gelatin (Sigma-Aldrich, St. Louis, MO, USA)-coated six-well plates and maintained in DMEM (Gibco, Grand Island, NY, USA) supplemented with endothelial cell growth supplement, heparin, L-Glutamine (Sigma-Aldrich), fetal bovine serum (FBS), and Antibiotic-Antimycotic (Gibco).
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10

Isolation of Primary Mouse Brain Endothelial Cells

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Primary mouse brain microvessel endothelial cells were isolated according to the reported methodology39 (link). Briefly, 8-week-old healthy C57/BL6 WT mice were sacrificed and brain tissue was isolated. The tissue sample was fragmented into small pieces and digested with Liberase Blendzyme (0.625 mg/ml, Roche) at 37 °C on a rotator for 1 h. The brain cells were then seeded in Collagen type I coated flasks in EndoPM culture medium (1% Endothelial Cell Growth Supplement (ECGS), 1% antibiotic solution, and 5% fetal bovine serum in Endothelial Cell Medium). The cellular suspension was maintained in the incubator for 14 days. Endothelial cells were then enriched with magnetic sorting with anti-CD31 microbeads (Miltenyi) with auto-MACS (Miltenyi) and expanded before subjected to further experiments.
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