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Plan apochromat 63 1.4 oil dic objective

Manufactured by Zeiss
Sourced in Germany

The Plan-Apochromat 63x/1.4 Oil DIC objective is a high-performance microscope objective from Zeiss. It features a magnification of 63x and a numerical aperture of 1.4, making it suitable for a variety of microscopy applications. This objective is designed to provide excellent optical performance and image quality.

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16 protocols using plan apochromat 63 1.4 oil dic objective

1

Quantitative Analysis of Cellular Organelle Dynamics

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Fixed or live cells were imaged using a Zeiss LSM 5, Pascal Axiovert 200 confocal microscope (Carl Zeiss, Oberkochen, Germany), with a Plan-Apochromat ×63/1.4 Oil DIC objective and 488, 543 and 639 nm excitation lasers. In each independent experiment, 5–15 cells were evaluated and averaged [7 (link)]. For dynamic calcium measurements, images were acquired at 1 s intervals. Basal fluorescence was measured for 50 s, and then histamine-induced signals were imaged for 200 s. Data are expressed as fluorescence change relative to basal values ([F − F0]/F0). The area under the curve was quantified during the first 50 s post-stimulus. For static fluorescence measurements, images were deconvoluted, background-subtracted, thresholded and analysed using the ImageJ software. Colocalization analysis was performed within a single plane at the cell equator using the JACoP plugin. 3D object analysis was performed on cell reconstructions consisting of 10 z-planes using the 3D Object Counter plugin. ER cross-sectional area, mean mitochondrial area, mitochondrial DRP1 fluorescence and MTO/mtHSP70 fluorescence ratio per mitochondria were analysed within a single plane at the cell equator using the Analyze Particles function. For triple colocalization analysis, image intersections were obtained using the Image Calculator command of ImageJ (“AND” operator).
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2

Hypoxia-induced Snai1-14-3-3γ Interaction

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MKN74CTRL or MKN74ΔANGPTL4 (5 × 103 cells) were subjected to either normoxia or hypoxia for 2 days at 37 °C. At indicated time, MKN74 cells were fixed, permeabilized and blocked like immunofluorescence staining. Next, MKN74 cells were incubated with monoclonal mouse-anti human 14-3-3γ antibody (1:200) and monoclonal rabbit anti-human Snai1 antibody (1:200) in 3% NGS overnight at 4 °C. PLA was carried out as per the manufacturer’s protocol (Olink Bioscience, Watertown, MA, USA). Images were taken using Carl Zeiss confocal microscope LSM710 using a Plan-APOCHROMAT 63 × /1.4 oil DIC objective, and ZEN2012 LE software with constant exposure and gain. Number of protein interaction was quantified using the BlobFinder software.47
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3

Endocytosis Dynamics of FGF2-GFP and Transferrin

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The HeLa S3 wild-type, GPC1 knockout, and GPC1 knockout + GPC1 cells used in Figures 2 and 4 were cultivated in µ-Slide 8 Well Glass Bottom dishes in the absence of doxycycline. This prevented the expression of FGF2-GFP so that endocytosis experiments with purified FGF2-GFP and fluorescent transferrin could be conducted without interference. For live cell imaging, cells were washed twice with cold Live Cell Imaging Solution (Thermo Fisher Scientific) and incubated for 5 min on ice. Cells were imaged with a Zeiss LSM 800 confocal microscope using a Zeiss Plan-APOCHROMAT 63×/ 1.4 Oil DIC objective. Imaging was started directly after replacing the solution with cold Live Cell Imaging Solution containing both 25 µg/ml Transferrin-Alexa Fluor 546 (Thermo Fisher Scientific) and 5 µg/ml recombinant FGF2-GFP (Steringer et al., 2017 (link)). Time-lapse videos were recorded with images being acquired every 10 s for a total of 20 min for each cell line. In parallel experiments, still images of fixed cells (4% PFA; Electron Microscopy Science) were taken at time points of up to 60 min using the same microscopy settings as indicated above. For time points 0, 5, and 10 min, different laser power and digital gain settings were used due to smaller fluorescent signals at shorter incubation times. Images and videos were processed using Fiji (Schindelin et al., 2012 (link)).
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4

Fluorescent Visualization of Antibody Conjugates

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SK-BR-3 and MDA-MB-453 cells (105 cells/well in 24-well), previously seeded on a coverslip for 24 h, were incubated for 1 h with 500 nM of 10_12 or 10_12-CL4 conjugates in BlockAid™ Blocking Solution (Life Technologies) at RT. Then, cells were washed three times in PBS and fixed in PBS/PFA 4% for 20 min. For the fluorescence visualization of mAbs and conjugates, cells were incubated with FITC-labeled anti-human IgG antibody (Fluorescein (FITC) AffiniPure Goat Anti-Human IgG (H + L) 1:300, Jackson ImmunoResearch Laboratories Inc., Madison, WI, USA) for 1 h at RT and then washed three times with PBS. Finally, cells were incubated with 1.5 μM 4′,6-Diamidino-2-phenylindole (DAPI, D9542, Sigma-Aldrich) and mounted with glycerol/PBS. Samples were visualized by Zeiss LSM 700 META confocal microscopy equipped with a Plan-Apochromat 63×/1.4 Oil DIC objective.
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5

Dual Immunofluorescence Staining of CD63 and TIMP-1 in Breast Cancer Cells

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MDA-MB-231, BT-549, Cis-Pt-R and Dox-R (1.0 × 105 cells/well, 24-well plates) were seeded on a coverslip for 24 h and then fixed in 4% paraformaldehyde/DPBS for 10 min at room temperature (RT). For CD63 staining, cells were subjected to blocking in 3% FBS for 1 h at RT and then incubated with anti-CD63 antibody (Santa Cruz Biotechnology), washed three times in DPBS and incubated with Fluor 488 anti-mouse (Invitrogen). For dual staining of CD63 and TIMP-1, cells were subjected to blocking in 2% bovine serum albumin for 1 h at RT and then incubated with anti-CD63 (Proteintech, Rosemont, IL, USA) and anti-TIMP-1 (ThermoFisher Scientific) antibodies, followed by three washes with DPBS and incubation with Alexa Fluor 488 anti-mouse (anti-TIMP-1) and Alexa Fluor 567 anti-rabbit (anti-CD63). Finally, after three washes in DPBS, cells were incubated with 1.5 μM 4′,6-Diamidino-2-phenylindole (DAPI, Sigma-Aldrich) and mounted with glycerol/DPBS. Samples were visualized by Zeiss LSM 700 META confocal microscopy equipped with a Plan-Apochromat 63×/1.4 Oil DIC objective.
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6

Comprehensive Biophysical Characterization

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Centrifugation was performed with a 5804R Eppendorf Centrifuge equipped with an A-4-44 rotor, using 15 mL tubes. Ultracentrifugation for large volumes (up to 50 mL) was performed with an Optima XPN-100 equipped with a TY45 Ti rotor (Beckman Coulter, USA) while for small volumes (up to 1.5 mL) we used an Optima MAX-XP using a TLA-55 and a MLS-50 rotor (Beckman Coulter, USA). Images from western blot and gel fluorescence were acquired with a Syngene G : BOX Chemi XX9 (SYNGENE, UK) and were analyzed and quantified with the software Genesys and GeneTools (SYNGENE, UK). NanoDrop™ OneC (ThermoFisher, Rockford, USA) was used to characterize mCTX. A Zeiss LSM510 with a Plan-Apochromat 63×/1.4 Oil DIC objective (Germany) was used to perform fluorescence confocal microscopy. All the VivaSpin columns used in this work were purchased from Sartorius Stedim Lab Lid (Sperry Way, Stonehouse, UK). A NanoSight NS300 system was used to determine the size distribution and the particle concentration of REV samples (Malvern Technologies, Malvern, UK). A BIAcore X-100 instrument was used for SPR (Cytiva Life Science, Marlborough, MA, USA).
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7

Two-Photon Lithography for Micro-Structures

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Two-photon lithography was performed using a commercially available system (Photonic Professional GT, Nanoscribe GmbH) using a Zeiss Plan-Apochromat 63×/1.4 Oil DIC objective. Rastering of the laser was achieved via a set of galvo-mirrors and piezoelectric actuators. For all structures made, the laser power and scan speed were set at 20 mW and 2 cm s-1 respectively. Glass substrates 30 mm in diameter and 0.17 mm thick were used in conjunction with silicon chips 1 cm (L) × 1 cm (W). The photoresist was drop casted onto the glass substrate and then a silicon chip placed over it, using Kapton tape of approximately 100 μm in thickness as a spacer. The structures were then written on the silicon chip via TPL. The finished sample was developed in PGMEA for 30 min followed by an immersion in IPA for 5 min.
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8

Immunofluorescence Imaging and Colocalization Analysis

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Cells were fixed for 15 min in 4% paraformaldehyde at 37°C and blocked and permeabilized with 5% normal goat serum containing 0.3% Triton X-100 for 1 h at room temperature. Primary antibodies diluted in PBS containing 1% BSA and 0.3% Triton X-100 were added to cells for staining overnight at 4°C, followed by secondary antibody incubation for 1 h at room temperature. Cells were then mounted on slides with Aqua Poly/Mount mounting media (Polyscience, Inc.). Images were acquired at room temperature using an LSM Image browser software on a confocal microscope (model LSM 510; Carl Zeiss), using a Plan-Apochromat 63×/1.4 oil DIC objective and Argon2, HeNe1, and HeNe2 laser. Colocalization and intensity of single-plane images were quantitated using measure colocalization plug-in of MetaMorph software after thresholding images to remove background.
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9

DNA Fiber Assay with Fluorescent Labeling

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DNA fiber assay was performed as described previously with some modifications (Schwab et al., 2015 (link)). In brief, exponentially growing cells were first incubated with 25 μM iododeoxyuridine (IdU) and then with 125 μM chlorodeoxyuridine (CldU) for the indicated times. Fiber spreads were prepared from 0.5 x106 cells/ml. Slides were stained as described previously . A confocal microscope (LSM 510 Meta or LSM 710 Meta; Carl Zeiss) equipped with Plan-Apochromat 63 × /1.4 oil DIC objective was used to collect fiber images from randomly selected fields at RT using ZEN 2009 software (Carl Zeiss). Analysis was performed using the ImageJ software package (National Institutes of Health). A minimum of 100 fibers or 20 sister fork pairs per experiment from at least three independent experiments was scored. Mann-Whitney test was used to determine statistical significance. On boxplots whiskers indicate 5-95 percentile.
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10

Visualizing Spermatid Ultrastructure via SIM Microscopy

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Immunostainings were visualized using Leica TCS-SP2 AOBS confocal laser scanning microscope equipped with 63×/1.40 HCX PL APO oil-immersion objective (Leica Microsystems, Wetzlar, Germany). Confocal images shown are calculated maximum projections of sequences of three proximate single sections. SIM analysis was carried out on singularized spermatids from testis suspensions, which were fixed with 2% formaldehyde in PBS and spread on slides. After gentle drying, samples were further processed for immunolabeling as described above. SIM was conducted using Zeiss ELYRA S.1 equipped with Zeiss Plan-Apochromat 63×/1.4 oil DIC objective and run with Zeiss ZEN 2012 software package including Superresolution Structured Illumination plugin (Carl Zeiss Microscopy GmbH, Jena, Germany). Images were processed with ImageJ (National Institutes of Health, version 1.42q; http://rsbweb.nih.gov/ij) and Adobe Photoshop CS5 (Adobe Systems).
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