The largest database of trusted experimental protocols

12 protocols using anti gapdh

1

Quantitative Western Blotting Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blotting was performed as previously described23 (link). In brief, 10 mg of tissue was added to 500 µl ice cold radioimmunoprecipitation (RIPA) buffer containing a protease inhibitor (Roche) and homogenized on ice using a rotor-stator homogenizer (IKA) followed by centrifugation at 13,000 rpm at 4 °C for 30 min. Protein lysates were incubated in 4x Roti load sample buffer (Roth) for 5 min at 90 °C and resolved by SDS-PAGE (12% gels). Proteins were then transferred to PVDF membranes (Bio-Rad) using the Mini-Protean system (Bio-Rad). After blocking nonspecific binding, PVDF membranes were incubated with primary antibodies, including chicken anti-GFP (Aves Labs; 1:2000) for eGFP-L10a detection. Anti-GAPDH (Bethyl Labs, 1:5000) and anti-β-actin antibody (Santa Cruz, 1:10000) served as loading control. Membranes were subsequently probed with HRP-conjugated secondary antibody (Santa Cruz Biotechnology/ Bethyl Labs, 1:10000). Chemiluminescent detection of Proteins was performed using ClarityTM ECL substrate (Bio-Rad) on the Fusion FX (Vilber) chemiluminescent imaging platform.
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells and tissues were lysed by radioimmunoprecipitation (RIPA) buffer without sodium deoxycholate (50 mM Tris–HCl pH 7.6, 150 mM NaCl, 1% NP-40) with various inhibitors (1 mM Na3VO4, 1 mM AEBSF, 1 mM DTT, 10 μg/ml aprotinin, 1 μg/ml leupeptin, 10 mM NaF, 1 μg/ml pepstatin A) and cOmplete Protease Inhibitor Cocktail (Roche, Basel, Switzerland). Protein concentrations in the supernatants were detected by the DC™ protein assay kit (Bio-Rad Laboratories, Hercules, USA). The equal amounts of proteins were separated by SDS-PAGE. Proteins were detected by the following antibodies diluted by CanGetSignal Solution 1 (Takara Bio Inc.); anti-GAPDH (Bethyl Laboratories, Montgomery, TX, USA), anti-DYRK2 (Sigma-Aldrich), anti-phospho-Akt (Ser473) (Cell Signaling Technology, Danvers, MA, USA), anti-Myc, anti-Myc-Ser62 (Abcam), anti-FLAG (Sigma-Aldrich), anti-Hras, anti-cyclin E, anti-cyclin D1, and anti-cyclin D2 (Santa Cruz Biotechnology, Dallas, TX, USA). Membranes were developed by ImmunoStar LD (Fujifilm Wako Pure Chemical Co., Osaka, Tokyo) and imaged using FUSION SOLO 4 M, and analysed using Fusion Capt Advance software (M&S Instruments Inc., Osaka, Tokyo).
+ Open protocol
+ Expand
3

Comprehensive Protein Expression Analysis Using Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was performed using the following antibodies: anti-eIF3a (Novus NBP1-18891); anti-eIF3b (Bethyl A301-761A); anti-eIF3c (Bethyl A300-376A); anti-eIF3d (Bethyl A301-758A); anti-eIF3e (Bethyl A302-985A); anti-eIF3f (Bethyl A303-005A); anti-eIF3g antibody (Bethyl A301-757A); anti-eIF3h antibody (Bethyl A301-754A); anti-eIF3i (Biolegend 646701); anti-eIF3k (Novus NB100-93304); anti-eIF3l antibody (Genetex GTX120119); anti-eIF3m (Novus NBP1-56654); anti-rpS19 (Bethyl A304-002A); anti-eIF4G1 (Bethyl A301-775A); anti-c-Jun (Bethyl A302-959A); anti-BTG1 (Abcam ab151740). anti-GAPDH (Bethyl A300-640A); anti-HSP90 (BD 610418).
+ Open protocol
+ Expand
4

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell lysates were prepared by incubation with whole-cell lysis buffer that included 0.5% NP40 and 1% SDS supplemented with HALT protease and phosphatase inhibitors (Sigma, St Louis, MO, USA). Lysates were cleared by centrifugation and protein concentration was tested by DC assay (Bio-Rad, Shanghai, China ). Lysates were boiled with SDS sample buffer, separated by SDS-PAGE, and transferred to polyvinylidene difluoride membrane (Millipore, Guangzhou, China). Membranes were blocked in 5% nonfat dry milk TBS-T (10 mmol/l Tris-HCl (pH 7.4), 150 mmol/l NaCl, 0.1% Tween 20) buffer and incubated in primary antibodies diluted in blocking buffer at 4 °C overnight. Blots were washed with TBS-T buffer and incubated with horseradish peroxidase-conjugated secondary antibodies (1 : 10 000; GE Healthcare, Shanghai, China) in blocking buffer at room temperature. Immune complexes were visualized with an enhanced chemiluminescence kit (GE Healthcare). Primary antibodies for immunodetection were sourced as follows: anti-tubulin (goat, Santa Cruz Biotechnology, Guangzhou, China), anti-DDX59 (Abcam, Guangzhou, China), anti-GAPDH (Bethyl, Beijing, China), anti-Lamin B1 (Santa Cruz Biotechnology), anti-SOD (Santa Cruz Biotechnology).
+ Open protocol
+ Expand
5

Comprehensive Protein Expression Analysis Using Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was performed using the following antibodies: anti-eIF3a (Novus NBP1-18891); anti-eIF3b (Bethyl A301-761A); anti-eIF3c (Bethyl A300-376A); anti-eIF3d (Bethyl A301-758A); anti-eIF3e (Bethyl A302-985A); anti-eIF3f (Bethyl A303-005A); anti-eIF3g antibody (Bethyl A301-757A); anti-eIF3h antibody (Bethyl A301-754A); anti-eIF3i (Biolegend 646701); anti-eIF3k (Novus NB100-93304); anti-eIF3l antibody (Genetex GTX120119); anti-eIF3m (Novus NBP1-56654); anti-rpS19 (Bethyl A304-002A); anti-eIF4G1 (Bethyl A301-775A); anti-c-Jun (Bethyl A302-959A); anti-BTG1 (Abcam ab151740). anti-GAPDH (Bethyl A300-640A); anti-HSP90 (BD 610418).
+ Open protocol
+ Expand
6

Western Blot Analysis of NAMPT Protein

Check if the same lab product or an alternative is used in the 5 most similar protocols
Brains were dissected and homogenized in ice-cold RIPA lysis buffer (Beyotime Institute of Biotechnology). Then they were centrifuged with 8,700 x g at 4˚C for 10 min to obtain total proteins. After that each sample was quantitatively tested by Nano Drop, and loaded with the same total protein amount (50 mg). The proteins were separated by 10% SDS-PAGE, and transferred to PVDF membranes using an electrophoretic transfer system (Bio-Rad Laboratories, Inc.). Membranes were blocked against non-specific binding in 5% skimmed milk for 1 h at room temperature. The membranes were then incubated with anti-NAMPT (1:5,000; cat. no. A300-372A; Bethyl Laboratories, Inc.) or anti-GAPDH (1:1,000; cat. no. AF1186; Beyotime Institute of Biotechnology) primary antibody overnight at 4˚C. The membranes were washed by TBST (0.1% tween-20; Beyotime Institute of Biotechnology) and incubated with HRP-labeled goat anti-rabbit IgG (H+L) (1:200; cat. no. A0208; Beyotime Institute of Biotechnology for 1 h at room temperature. Then BeyoECL Moon (cat. no. P0018FS; Beyotime Institute of Biotechnology) was used for visualization. Finally, the results were analyzed using the Tanon 5200 Imaging System (Tanon Science and Technology Co., Ltd.).
+ Open protocol
+ Expand
7

Immunoblotting for Cellular Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell extracts were prepared according to standard protocols and tested by western blot using anti-GAPDH (Bethyl; dilution: 1:25,000), anti-IGFBP-1 (Santa Cruz; dilution:1:1,000), anti-phospho acetyl-coA-carboxylase (Cell Signaling; dilution: 1:2,000), anti-phospho-AMPK (Cell Signaling; dilution: 1:2,000), anti-phospho-mTOR (Cell Signaling; dilution: 1:2,000), anti-phospho-p53 (Cell Signaling; dilution: 1:2,000), anti-p21 (Santa Cruz; dilution: 1:1,000), anti-gH2Ax (Millipore; dilution: 1:1,000), anti-β-actin (Sigma; dilution: 1:10,000), anti-PKM2 (Santa Cruz; dilution: 1:1,000), anti-PDHK1 (Cell Signaling; dilution: 1:2,000), OxPhos Complex Kit (Anti-Rt/ms; Invitrogen), anti-TFAM (Calbiochem; dilution: 1:1,000) and anti-PGC1α (Abcam; dilution: 1:1,000).
+ Open protocol
+ Expand
8

Western Blot Analysis of Prostate Cancer Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed by lysis buffer (20 mM Tris, 150 mM NaCl, 1 mM EDTA, 0.5% Triton-X 100, protease inhibitor (Roche)) and disrupted by a sonicator. Cell lysates were centrifuged at 15,000 rpm and soluble supernatants were separated. 15–30 μg of cell lysates were mixed with sample buffer (60 mM Tris, 25% glycerol, 2% SDS, 5% β-mercaptoethanol, 0.05% bromophenol blue) and separated by 10% SDS-PAGE. The proteins were transferred to nitrocellulose membrane. Membranes of each protein size were probed with the primary antibodies and the corresponding secondary antibodies. The signals were detected using LAS-500 (GE Healthcare) according to manufacturer’s protocol. All signals were quantified using Image J software54 (link). Following antibodies were purchased: anti-AR (Cat# SC-7305, Santa Cruz Biotechnology), anti-AR-V7 specific (Cat# 68492S, Cell signaling), anti-PSA (Cat# ab53774, Abcam), anti-GAPDH (Cat# A300-641A, Bethyl), anti-Lamin A/C (Cat# 2032, Cell signaling).
+ Open protocol
+ Expand
9

Granulocyte Protease Inhibition for Immunoblotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Differentiating granulocytes were first incubated in 5.4mM diisopropyl fluorophosphate (DFP) for 15 minutes on ice to prevent protein degradation caused by neutrophil-derived protease16 (link). Washed cells were then lysed directly in 1x SDS loading buffer followed by immediate boiling in the presence of 100mM DTT for 10 minutes before loading on SDS-PAGE for Western blotting. Antibodies used are: Anti-GAPDH (Bethyl, A300-641A), Anti-NELFA (Bethyl, A301-910A), Anti-NELFB (Bethyl, A301-912A), Anti-NELFD (Santa Cruz, sc393972), Anti-NELFE (Santa Cruz, sc377052), anti-Flag (Sigma, F1804).
+ Open protocol
+ Expand
10

Western Blot Analysis of Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Same numbers of cells were used to extract proteins in 1× passive lysis buffer (Promega; E194A), and protein supernatant was collected after centrifugation at 16,200 g at room temperature. Proteins were denatured in 1× sample buffer (10% glycerol, 0.002% bromophenol blue, 0.075 M Tris, 2% SDS and 5% beta-mercaptoethanol) by boiling at 99°C for 10 min and centrifuged at 16,200 g for 10 min. Western blotting was performed as described (Kumar et al, 2013 (link)). Following antibodies were used for immunoblot analyses: anti-phospho p53 (s15) (Cell Signaling; #9284), anti-phospho p38 MAPK (Thr 180/Tyr 182) (Cell Signaling; 4631), anti-phospho-YAP (Ser127) (Cell Signaling; #4911), anti-p21 (H-164) sc-756 (Santa Cruz Biotech) and anti-GAPDH (Bethyl; A300-641A).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!