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6 protocols using laminin 511 e8

1

Definitive Endoderm Differentiation from iPSCs

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Human iPSCs were routinely cultured in mTeSR1 on Matrigel (growth factor reduced) (BD Biosciences, Bedford, MA, USA)-coated plates for the TKDA3-4 iPSC clone and in StemFit (AK03N, Ajinomoto, Tokyo, Japan) on Laminin-511 E8 (Nippi, Tokyo, Japan)-coated dishes for the clinical xeno-free iPSC clones including D2, 1383D6, 1231A3, and Ff06. To generate definitive endoderm cells, we plated monolayers of pluripotent cells harvested using Accutase (Millipore, Billerica, MA, USA) on 6-well plates (Corning Costar #3516) (Corning, NY, USA) pre-coated with 1:30 diluted Matrigel (growth factor reduced; BD Bioscience) or 0.5 μg/cm2 Laminin-511 E8 (Nippi) at a density of 6 × 105 cells per well with 100 ng/mL activin A (R&D Systems, Minneapolis, MN, USA), 50 ng/mL Wnt3a, and 10 μM Rock inhibitor Y27632 in RPMI/B27 (Invitrogen, Carlsbad, CA, USA) medium for 1 day. Differentiation was initiated by culture with 100 ng/mL activin A and 50 ng/mL Wnt3a in RPMI/B27 medium for 1 day under 5% CO2, followed by 2 days with 100 ng/mL activin A, 0.5 ng/mL BMP4 (Peprotech, Rocky Hill, NJ, USA), 5 ng/mL FGF2 (Invitrogen), and 10 ng/mL VEGF (Gibco, Carlsbad, CA, USA) in RPMI/B27 under 5% CO2, then followed by another 2 days with 100 ng/mL activin A, 0.5 ng/mL BMP4 (Peprotech), 5 ng/mL FGF2 (Invitrogen), and 10 ng/mL VEGF (Gibco) in SFD-based medium under 5% CO2.
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2

Reprogramming HDFs and PBMCs into iPSCs

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HDFs or PBMCs from healthy control subjects and HMSN-P patients were reprogrammed by introducing the episomal vectors with OCT3/4, SOX2, KLF4, L-MYC, LIN28, and p53 carboxy-terminal dominant-negative fragment as previously described [34 (link)]. Established iPSCs were grown under feeder-free conditions on laminin-511 E8 (Nippi, Tokyo, Japan) -coated plates with StemFit AK03N (Ajinomoto, Tokyo, Japan) [35 ]. Another human iPSC clone, TIG107 [17 (link)], was added to the control iPSC group.
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3

Generating iPSCs from ALS Patients

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iPSCs were generated from skin fibroblasts or peripheral blood mononuclear cells of sporadic ALS patients using episomal vectors (Sox2, Klf4, Oct3/4, L-Myc, Lin28, and p53-short hairpin RNA) as reported previously.21 (link),22 (link) Established iPSCs were cultured on an SNL feeder layer with human iPSC medium (primate embryonic stem cell medium; ReproCELL, Yokohama, Japan) supplemented with 4 ng/mL basic fibroblast growth factor (Wako Chemicals, Osaka, Japan) and penicillin/streptomycin or cultured under feeder-free conditions on laminin-511-E8 (Nippi, Tokyo, Japan)-coated plates with StemFit AK01 (Ajinomoto, Tokyo, Japan). The information on iPSC clones is listed in Table S3. Karyotyping was performed by Nihon Gene Research Laboratories (Sendai, Japan).
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4

Extracellular Matrix Coatings for Cell Culture

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All ECM coating solutions were prepared as recommended by the manufacturers. Wells were coated with laminin511-E8 (LN511; Nippi, Tokyo, Japan), laminin-521 (LN521; BioLamina, Sundbyberg, Sweden), recombinant truncated human vitronectin (VTN; Thermo Fisher Scientific, Waltham, MA, USA), or Matrigel® (MG; Corning, New York, NY, USA) at concentrations of 0.25–1 μg/ml overnight at 4 °C prior to cell seeding. Matrigel was prepared by diluting the matrix solution 1:100 in Dulbecco's Modified Eagle Medium/Nutrient Mixture F-12 (DMEM/F12). The protein concentration of matrix solution was determined as 159 μg/ml by BCA assay, and was coated at concentration of 8.3–33.1 μg/cm2 overnight at 4 °C prior to cell seeding. Volumes of coating solution were adjusted according to the growth area of the culture vessels used.
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5

Differentiation and Maintenance of hiPSC-Derived Intestinal Epithelial Cells

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The hiPSC-IECs were seeded on laminin511-E8 (Nippi, Tokyo) coated plates or Transwell inserts (Corning, Corning) at a high density of 2–3 × 105 cells/cm2 in advanced DMEM/F12 supplemented with 2 mM L-glutamine, 15 mM HEPES, 2% B27 supplement, 1% (v/v) N2 supplement (Thermo Fisher Scientific, Waltham), 100 U/mL penicillin, 100 μg/mL streptomycin, 1 mM N-acetylcysteine (Sigma-Aldrich, Saint Louis), 2.5 μg/mL amphotericin B (infrequent) (Sigma-Aldrich, Saint Louis), 10 nM human gastrin Ι (Peptide Institute, Osaka), 500 nM A-83-01 (Tocris Bioscience, Minneapolis), 10 μM Y27632 (only on the day of seeding) and 500 ng/mL recombinant human R-Spondin1, 100 ng/mL recombinant human Noggin and 100 ng/mL recombinant human EGF. For long-term culture, the hiPSC-IECs were embedded in Matrigel at 5,000-10,000 cells on 24-well culture plates or 100-mm culture dishes. After the Matrigel had solidified, the culture medium described above was overlaid and replaced every 3 or 4 days.
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6

Isolation of Mouse Thoracic DRG Neurons

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Thoracic DRGs were dissociated from mice euthanized by CO 2 inhalation. The DRGs were enzymatically digested with collagenase type II (Worthington, Lakewood, NJ) and DNase (Roche, Basel, Switzerland) and subsequently with trypsin (Worthington). After trituration, dissociated cells were plated on poly-L-lysine (Sigma-Aldrich, St Louis, MO) coated coverslips and cultured in Dulbecco's modified Eagle's medium (Sigma-Aldrich) supplemented with fetal bovine serum (Moregate Biotech, Blimba, Australia or Thermo Fisher, Waltham, MA), and penicillin/streptomycin (Thermo Fisher). For the patch clamp experiments, the coverslips were coated with poly-L-lysine and laminin 511-E8 (iMatrix-511, Nippi, Tokyo, Japan). The cells were used 16-32 h after plating.
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