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27 protocols using fc block clone 2.4g2

1

Multiparameter Flow Cytometry Analysis

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At selected time points following immunization, whole spleens were mechanically dissociated to generate single-cell suspensions. ACK lysis buffer was used to deplete red blood cells, after which splenocytes were resuspended in FACS buffer (2% FBS in PBS), incubated with Fc-block (clone 2.4G2, BD Biosciences) and stained for viability with Live/Dead Blue viability dye (Thermo Fisher Scientific) for 20 min at 4°C. Cells were then stained with a variety of antibodies, including antibodies against CD4-APC-eF780, CD8-APC-eF780, Gr-1-APC-eF780, F4/80-APC-eF780, B220-V421, CD95-PE-Cy7, CD38-A700, CD45.1-PerCP-Cy5.5, CD45.2-PE, IgD-APC-Cy7, and C138-BV650. For surface staining of eOD-GT8 binding, probes were labeled as described previously and added 30 minutes prior to antibody staining (Wang et al., 2021a (link)). Cells were acquired by a BD LSRFortessa (BD Biosciences) for flow cytometric analysis and sorted using a BD FACS Aria II instrument (BD Biosciences). Data was analyzed using FlowJo software (Tree Star).
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2

Immunofluorescence Staining of Frozen Tumor Sections

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Tumors were flash frozen in O.C.T. Compound (Tissue-Tek, Torrance, CA) and sectioned by HistoServ, Inc. (Germantown, MD). Sections were thawed in 4% microscopy grade PFA (Electron Microscopy Sciences) diluted in PBS for 15 minutes at room temperature (RT). Sections were permeabilized using 0.5% Triton X100 diluted in PBS for 10 minutes at RT and following washes were incubated for 1 hour at RT in blocking buffer: 1:1 dilution of Superblock (Thermo Fisher Scientific, Waltham, MA) in PBS with 1:100 Fc block (clone 2.4G2, BD Biosciences). Antibodies used for immunofluorescence were purchased from eBioscience. Alexa Fluor conjugated antibodies specific for CD4 (GK1.5) and CD8 (53-6.7) were diluted in blocking buffer. Sections were mounted using Prolong Gold Antifade Reagent with or without DAPI (Life Technologies). Sections were imaged using a Zeiss LSM 880 NLM Airyscan confocal microscope and analyzed using ZEN lite software (Zeiss, Thornwood, NY).
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3

Multiparametric Flow Cytometric Analysis of T and B Cells

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The population of T cell (CD4+ and CD8+) and germinal center B cells (GC) from splenocytes of mice on day 7 after challenge infection were analyzed by flow cytometry. Briefly, 1 × 106 splenocytes (each tube) in staining buffer (2% bovine serum albumin and 0.1% sodium azide in 0.1 M PBS) were incubated at 4°C for 15 min with Fc Block (clone 2.4G2; BD Biosciences, CA, USA). For surface staining, cells were incubated with surface antibodies (CD3e-PE-Cy5, CD4-FITC, CD8a-PE, B220-FITC, GL7-PE; BD Biosciences, CA, USA) at 4°C for 30 min. Splenocytes were washed with staining buffer and fixed with 4% paraformaldehyde at 4°C for 30 min before acquisition using a BD Accuri C6 Flow Cytometer (BD Biosciences, CA, USA). Data were analyzed using C6 Analysis software (BD Biosciences, CA, USA).
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4

Flow Cytometric Analysis of T Cell Subsets

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CD4+ and CD8+ T cells populations from splenocytes of mice at 1-month post-challenge infection were analyzed by flow cytometry. Splenocytes (1×106 cell/ml) in staining buffer (2% bovine serum albumin and 0.1% sodium azide in 0.1 M PBS) were incubated for 15 min at 4°C with Fc Block (clone 2.4G2; BD Biosciences) [19 (link)]. For surface staining, cells were incubated with surface antibodies (CD3e-PE-Cy5, CD4-FITC, CD8a-PE, BD Biosciences) at 4°C for 30 min. Splenocytes were washed with staining buffer and fixed with 4% paraformaldehyde at 4°C for 30 min before acquisition using BD Accuri C6 Flow Cytometer (BD Biosciences). Data were analyzed using C6 Analysis software (BD Biosciences).
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5

Quantifying Apoptosis Signaling Pathways

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B16-F10 cells treated with Navtemadlin or DMSO control, were harvested and single-cell suspensions were incubated with Fc Block (clone 2.4G2, BD Biosciences) for 10 minutes at room temperature to reduce unspecific antibody binding. Intracellular staining to detect p53, p21, Bax, PUMA, BCL-2, and MCL-1 Ps159 was performed using the FoxP3 staining kit (Thermo Fisher Scientific) according to the manufacturer's instructions. Briefly, cells were fixed in fixation/permeabilization buffer for 30 minutes at 4°C and washed with permeabilization buffer. Fixed cells were then incubated for 30 minutes at 4°C with antibodies against intracellular proteins: p53-Alexa 647, 1:75 (1C12, Cell Signaling Technology); p21-Alexa 488, 1:100 (F-5);Bax-Alexa 595, 1:100 (B-9); PUMA-PE, 1:100 (B-6) from Santa Cruz Biotechnology; BCL-2-PE-Vio770, 1:10 (REA356, Miltenyi Biotec) and MCL-1 Ps159-PE, 1:50 (REA924, Miltenyi Biotec).
After washing, single-cell suspensions were resuspended in flow buffer (0.5% BSA, 2 μmol/L EDTA in PBS) containing the DNA stain FxCycle Violet (1:2,000 dilution, Thermo Fisher Scientific). A minimum of 30,000 cells were acquired on an ImageStreamX Mk II Imaging Flow Cytometer (Amnis corporation) equipped with 405, 488, 561, 642, and 785 nm lasers at 60 × magnification. Data analyses were performed using IDEAS Software (Amnis Corporation).
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6

Murine Splenic Immune Cell Analysis

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Spleens were aseptically isolated from ten mice from each group 4 weeks after challenge. Splenocyte suspensions were prepared in RPMI-1640 culture media supplemented with 10% FBS, after RBC lysis with red blood cell lysing buffer hybrid-max (Sigma-Aldrich, St. Louis, MO, USA), for flow cytometry analysis, antibody secreting cell (ASC) assays and cytokine analysis. Cells were stained with trypan blue (Welgene, Daegu, South Korea) and counted with a hemocytometer chamber under a microscope. Splenocytes from each animal were resuspended in staining buffer (2% bovine serum albumin and 0.1% sodium azide in 0.1 M PBS). Cells from individual mouse were separately incubated with Fc Block (clone 2.4G2; BD Biosciences, CA, USA) to block non-specific binding at 4°C for 15 min, and then stained at 4°C for 30 min with different combinations of FITC, PE, PE-Cy5, PE-Cy7 or APC conjugated anti-CD3e (145-2c11), anti-CD4 (GK1.5), anti-CD8a (53–6.7) (BD Biosciences, CA, USA). For memory T cell responses, anti-CD44 (IM7) and anti-CD62L (MEL-14) were used (BD Biosciences, CA, USA) as indicated [28 ]. For memory B cell responses, anti-CD45R/B220 (RA3-6B2), anti-CD27 (LG-3A10) and anti-IgG1 (A85-1) were used (BD Biosciences, CA, USA) [29 (link)]. Events were acquired on BD Accuri C6 Flow Cytometer (BD Biosciences, CA, USA) and data were analyzed using C6 Analysis software (BD Biosciences, CA, USA).
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7

Pulmonary Leukocyte Isolation and Flow Cytometry

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Pulmonary leukocytes were obtained as previously described by Oliveira-Brito et al. [69 (link)]. Prior to phenotyping the cell populations in the lungs, the concentrations of the cell suspensions were determined using a Neubauer chamber. Each sample was adjusted to a concentration of 1 × 106 cells/mL, and the cells were thereafter stained with fluorophore-conjugated antibodies. The following antibodies were obtained from BD Pharmingen (San Diego, CA, USA): anti-CD3 (PE-Cy5 rat anti-mouse CD3, clone 17A2), anti-CD11c (Alexa Fluor 488 rat anti-mouse CD11c, clone M1/70), anti-Ly6G (PE rat anti-mouse Ly-6G, clone 1A8), and anti-CD11b (PE rat anti-mouse CD11b, clone M1/70). After incubation for 30 min at 4 °C with 0.5 μg of anti-CD16/CD32 mAb (Fc block, clone 2.4G2, BD Pharmingen), 2.5 μg/mL of the aforementioned antibodies was added and the suspension incubated for 45 min at 4 °C. The cells were washed twice with PBS and fixed with 1% PBS-formaldehyde for further analysis using flow cytometry (Guava EasyCyte™ Mini System).
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8

Immune Cell Dynamics in Malaria Infection

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6-week-old BALB/cJRj mice (Charles River) were i.p. infected with 5 x 105 parasites and sacrificed on days 2, 4, and 7 p.i. Immediately after being killed, mice were peritoneally lavaged with PBS, and recovered lavage fluid was centrifuged at 500 g for 8 min. Peritoneal cells were washed once with PBS. Harvested cells were suspended in stain buffer (PBS containing 2% FBS and 0.1 mM EDTA), seeded in 96-well plates (106 cells/100 μl), and pretreated with FcBlock (clone 2.4G2; BD Biosciences) for 30 min at 4°C. Cells were then incubated with fluorescently conjugated antibodies for cell surface markers from BD Biosciences: PE-conjugated anti-CD11b, PE-conjugated anti-Gr1 (clone RB6-8C5), PE-conjugated anti-F4/80, and APC-conjugated anti-Ly6G. Isotype controls consisted of PE-conjugated rat IgG2b, PE-conjugated rat IgG2a, and APC-conjugated rat IgG2a, provided by BD Biosciences. Analysis of stained cells was performed with a FACSCalibur flow cytometer (BD Biosciences). For all samples, 100,000 cells were analyzed for plot generation.
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9

Flow Cytometry Analysis of Tumor-Infiltrating Immune Cells

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J558 tumors were resected on day 11 post implantation. Single-cell suspensions were prepared by dissociation and passing cells through a 70-µm filter. Cells (1 × 106) were plated in 96-well plates, treated with Fc block (clone 2.4G2; BD Biosciences), and stained with fluorochrome-conjugated antibodies against surface or intracellular markers (Table S1). Expression of mCD38 among tumor-infiltrating immune subsets was performed using a fluorochrome-conjugated mouse CD38 antibody that was determined to bind a different epitope than the anti-mCD38 treatment antibody. For intracellular staining, samples were fixed, permeabilized, and stained with antibodies (FoxP3 staining buffer set; eBioscience, San Diego, CA, USA). Antibody fluorescence was detected by flow cytometry on Fortessa (BD Biosciences), and the results were analyzed using FlowJoTM software (FlowJo, Ashland, OR, USA).
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10

Multi-Dimensional Immune Cell Profiling

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Cells were incubated with fixable viability dye (eFluor 455UV; eBioscience, UK) followed by CD16/CD32 antibody (Fc-block; clone 2.4G2, BD Bioscience, UK), then stained with directly conjugated antibodies (10 μg/ml and analysed using an LSR II device (BD Bioscience, UK). The following antibodies were purchased from BD Bioscience, UK unless stated otherwise: MHC class II #553623, CD4 #552051, CD11b #550993, CD11c #550261, CD135 #562537, CD40 #562846, CD86 #560581, CD25 #553866, CCR7 #563596, PDL-1 #564716, Zbtb46 #565832, SIRP-1α #740159, c-kit #560185, CD115 #25–1152-82 (eBioscience) and CX3CR1 #149023 (Biolegend). Transcription factor buffer (BD Bioscience, USA, catalog #562574) was used in accordance with the manufacturer’s instructions to test for transcription factors. FlowJo software (TreeStar, Inc., Ashland, OR, USA) was used for data analysis.
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