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6 protocols using edta free trypsin

1

Quantifying NPC Apoptosis via Flow Cytometry

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The apoptosis ratio of NPCs was determined using an apoptosis kit (Solarbio) according to the manufacturer’s instructions. The cell culture medium was carefully collected, EDTA-free trypsin (Solarbio) was added, and afterwards, the previously collected medium was added to terminate the digestion. The cells were gently resuspended and transferred into a centrifuge tube before centrifugation at 300
g at 4°C for 5 min. Next, the supernatant was discarded, and binding buffer (Solarbio) was added to adjust the cell concentration to 5×10
6 cells/mL. Then, 100 μL of the cell suspension was added to a 5-mL flow tube, along with 5 μL Annexin V/FITC (Solarbio) and incubated in the dark at room temperature for 5 min. Finally, 5 μL of propidium iodide solution (PI; Solarbio) and 400 μL PBS were added to the flow tube, and cells were immediately analyzed by flow cytometry (cytoFLEX; Beckman, California, USA).
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2

Apoptosis Induction by ER Stress

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Cells in TG only, ATF6 (151-366aa) + TG, and ATF6 (1-366aa) + TG groups were treated with 1 µM TG for 48 h to induce ER stress. Cells in these three experimental groups plus the normal control group were seeded into 6-well plates at a density of 2×104 cells/well, and digested and collected with EDTA free trypsin (Beijing Solarbio Technology Co., Ltd., Beijing, China). The cells were then stained with Annexin V-FITC and propidium iodide (Qcbio Science and Technologies Co., Ltd., Shanghai, China), and incubated at room temperature for 15 min in a dark place. The cultures were then analysed by EPICS XL-MCL flow cytometry (Beckman Coulter, Fullerton, CA, USA) at an excitation wave length of 488 nm and an emission wavelength of 530 nm. The experiment was run three times, and the apoptosis rate for every group was calculated.
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3

Bovine Hepatocyte Apoptosis Assay

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In each 24-well, 5 × 10 4 bovine hepatocytes were seeded for 24 h incubation in an incubator (3111, Thermo Fisher Scientific) set at 37°C under a humidified atmosphere composed of 95% air and 5% CO 2 . After indicated treatment, the hepatocytes were collected through digestion using EDTA-free trypsin (T1350, Solarbio). The apoptotic cells were stained using an Annexin V-FITC Apoptosis Detection Kit (with propidium iodide, 88-8005-74, Thermo Fisher Scientific) according to manufacturer's instructions and detected by BD FACS-Verse Flow Cytometer (BD Biosciences). The data were analyzed by Flowjo software.
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4

Apoptosis Assessment of 4T1 Cells

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4T1 cells were digested and collected with EDTA-free trypsin (Solarbio life science, Beijing, China) 24 h after irradiation with X-rays. The cells were washed twice more with pre-chilled PBS, then resuspended with staining buffer, and finally PI (5 μL per sample) and AnnexinV FITC (10 μL per sample) were added for 15 min before machine detection. Apoptosis detection kits (#E-CK-A211) were purchased from Multisciences Biotech, CO., LTD (Beijing, China). The FlowJo software was used to analyze the data obtained by flow cytometry.
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5

Apoptosis Analysis of U27 Cells

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U27 cells (2 × 105 cells/well/mL) were seeded in 6-well plates, and basic medium containing ISO (20 and 40 μM) was added to each well. Annexin V-FITC/PI Apoptosis Detection Kit (Invitrogen, USA)was used to detect the level of cell apoptosis. After 48 h, the medium was collected, and adherent cells were removed using EDTA-free trypsin (Solarbio, Beijing, China). Samples were centrifuged at 1000× g for 5 min at 4 °C. Next, samples were incubated with Annexin V-FITC solution in the dark for 15 min at 25 °C. Then, propidium iodine (PI) solution was added and incubated for 5 min in the dark. FACSVerse flow cytometer25 (FCM, BD Biosciences, San Jose, CA, USA) was used to analyze the number of apoptotic cells, and FlowJo v10.7 software (Tree Star, Woodburn, OR, USA) was used to determine the apoptotic ratio. Quadrant 1 represents early apoptosis, quadrant 2 represents late apoptotic cells, quadrant 3 represents necrotic cells, and quadrant 4 represents live cells. The apoptosis rate was calculated as the sum of the percentages of cells in quadrant 1 section and quadrant 2 section.
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6

Apoptosis Assay for PC12 Cells

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The neuronal PC12 cells in the three groups were washed twice with pre-cooled PBS and processed using the Annexin V-APC/7AAD kit (BioLegend, San Diego, CA, USA) following the manufacturer’s instructions. Briefly, the cells were digested with EDTA-free trypsin (Solarbio, Beijing, China). After incubation with stain and binding buffer at room temperature for 15 min in darkness, the mixed cell suspension was transferred to flow tubes. The apoptosis rate was then determined using a flow cytometer (CytoFlex; Beckman Coulter, Inc., Brea, CA, USA).
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