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Cel mir 39 3p spike in control

Manufactured by Qiagen

The Cel-miR-39-3p spike-in control is a synthetic RNA oligonucleotide that can be used as a reference for normalization in microRNA expression analysis experiments. It is derived from the Caenorhabditis elegans microRNA cel-miR-39-3p and is commonly used as an exogenous spike-in control to monitor the efficiency of RNA extraction, reverse transcription, and real-time PCR amplification.

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2 protocols using cel mir 39 3p spike in control

1

Extracellular miRNA Extraction and Purification

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Cellular and intravesicular miRNAs were extracted from centrifugation pellets or immunoprecipitates. These were lysed with 700 µL of Qiazol (Qiagen, Venlo, The Netherlands). Extraction was then performed using the “miRNEasy mini kit” (Qiagen) according to the supplier’s recommendations. Eluates were stored at −80 °C before analysis.
The miRNAs from culture supernatants, centrifugation supernatants or filtrates were extracted from 200 µL of the sample. The extraction was then performed using the miRNEasy Advanced Serum/Plasma Kit (Qiagen) according to the supplier’s recommendations.
Extractions from the different kits were performed on the Qiacube automated system (Qiagen).
Cel-miR-39-3p spike-in control, obtained from Qiagen, was added to the samples to either check the quality of the purification or normalize the bkv-miR-B1-5p qPCR results after successive filtrations and or centrifugations.
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2

Serum miRNA Isolation and Analysis

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The investigation was conducted in accordance with the ethical standards of the Declaration of Helsinki, and national and international guidelines on research with human subjects. Protocols were approved by the Western Norway Regional Committee for Medical and Health Research Ethics, the Regional Swedish Medical Ethical Review Board and the St. John's University Institutional Review Board. RNA Isolation and cDNA synthesis 24 (16 PD and eight control) serum samples were centrifuged, the supernatant used for miRNA isolation, and the isolated RNA quantified on a Nanodrop 2000 (Thermo Scientific). cel-miR-39-3p (spike-in control) (Qiagen) was added to the RNA lysis buffer.
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