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Cyflow cube 6 flow cytometer

Manufactured by Sysmex
Sourced in Germany, Poland

The CyFlow CUBE-6 is a compact and versatile flow cytometer designed for research and clinical applications. The instrument utilizes up to six laser excitation sources and multiple fluorescence detectors to enable comprehensive multiparameter analysis of cells and particles. The core function of the CyFlow CUBE-6 is to provide high-performance flow cytometry capabilities for a wide range of applications.

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7 protocols using cyflow cube 6 flow cytometer

1

Evaluating Extracts' Impact on HGEC Proliferation

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To determine the impacts of extracts on HGEC proliferation, HGEC were cultured in a 96-well plate after overnight incubation at the density of 8 × 103 cells/100 μL/well. After exposure to the extracts for 24 h, cellular morphology was recorded by an inverted microscope (TS-100, Nikon, Japan). Simultaneously, a cell counting kit-8 assay kit (CCK-8, Yi Fei Xue Biotechnology, China) was employed to analyse cell proliferation. To calculate cell viability, the absorbance was measured at 450 nm with a microplate reader (Molecular Devices LLC, USA).
Annexin V-FITC/PI apoptosis assay kit was used for cell apoptosis analysis. In brief, HGEC were seeded in 6-well plates (1 × 106 cells per well) with DMEM for 24 h. After that, the spent DMEM was replaced with the exposure solution and treated for 24 h. After the exposures, cells were harvested and washed with cold phosphate buffer saline (PBS) three times and then immersed in 500 μL of PBS binding buffer (containing 5 μL Annexin V-FITC and 5 μL of PI-staining solution) for 15 min at room temperature in the dark. Approximately 1 × 104 cells were loaded with a CyFlow® Cube 6 Flow cytometer (Sysmex Partec, Germany) to assess cell apoptosis, and then analyzed by Flow Jo Version 10.0.6 software (BD Biosciences, USA).
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2

Evaluating Electroporation Efficiency with Yo-Pro-1 Dye

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The efficiency of the electroporation protocols was by assessing the amount of the Yo-ProTM-1 Iodide fluorescent dye absorbed by the cell. Initially, cells were trypsinized and suspended in calcium-depleted electroporation buffer—SMEM (5 × 104 cells/400 µL), and Yo-Pro™-1 Iodide (YP-1, λexc491/λem509, Thermo ScientificTM, Warszawa, Poland) was added. Cell suspensions were then transferred to cuvettes and electroporated. Then cells were washed by DPBS to remove the content of the free dye, gently centrifuged 2 min × 100× g, and suspended in 500 µL of DPBS for measurements in polystyrene FACS tubes, 104 events/sample were measured in triplicate. Flow cytometric analysis was performed by using the CyFlow CUBE-6 flow cytometer (Sysmex, Warszawa, Poland). Data was analyzed using CyView Sofware (Sysmex, Warszawa, Polska).
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3

Electroporation Efficiency Assessment

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Flow cytometry analysis was performed to evaluate electroporation efficacy through the assessment of the ability of cells to internalize impermeant dye – Yo-pro-1. Immediately before EP, YO-PRO™-1 iodide (YP-1, λexc491/λem509, Thermo Scientific, Poland) was added to the cell suspension. Concentration of YP-1 in the STM or HEPES buffer was 1 μM. Flow cytometric analysis was performed using CyFlow CUBE-6 flow cytometer (Sysmex, Poland). The samples were excited using the 488-nm line of the blue laser and the fluorescence of YP-1 was measured with FL-1 detector. Data were analyzed using CyView software (Sysmex).
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4

Haploid Genome Size Estimation in Cepaea nemoralis

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The haploid chromosome number in C. nemoralis is 22 (Page 1978 ). We performed flow cytometry analysis to estimate the haploid genome size using zebrafish Danio rerio as a reference and the “CyStain PI Absolute P” reagent kit (Sysmex Europe, Germany). Briefly, zebrafish tail and snail foot tissues were chopped with a sharp razor blade in 500 µL ice-cold nuclei extraction buffer in a petri dish and incubated for 1 min. Then, the tissues were incubated for 30 minutes in 2.0 mL of staining buffer containing the fluorescent dye propidium iodide (50 µg/mL), RNAse (10 µg/mL), 0.1% dithiothreitol, and 1% polyvinylpyrolidone. The processed sample was passed through a nylon 50 µm filter. The DNA content of stained nuclei was determined using CyFlow-Cube-6 flow cytometer (Sysmex Europe, Germany) as an average of three replicates.
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5

Intracellular ROS Measurement by Flow Cytometry

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Either DMSO- or KJ-28d-treated cells (5 × 105) were further treated with 10 μM CM-H2DCFH-DA (Thermo Fisher Scientific, Rockford, IL, USA) for 30 min and then washed with phosphate-buffered saline (PBS). After trypsinization, cells were collected, washed, and resuspended in PBS. Inhibition of ROS was evaluated by treating cells with 5 mM NAC 2 h prior to KJ-28d treatment. Intracellular ROS levels were detected using a CyFlow cube 6 flow cytometer (Sysmex Partec, Gorlitz, Germany) at excitation/emission wavelengths of 488/525 nm.
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6

Flow Cytometry Analysis of Immune Cells

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Cells were collected by centrifugation for 3 minutes at 2,000 rpm, then washed and resuspended in phosphate-buffered saline (PBS), incubated for 5 minutes with the FcR blocking reagent and then stained with anti-CD45, anti-CD34 or anti-CD33 or isotype control. Analysis was performed on a CyFlow® Cube 6 flow cytometer (Sysmex, Milton Keynes, UK).
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7

Multiparametric Flow Cytometry Analysis of Murine Splenocytes

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Single-cell suspensions from spleen of mice were stained with anti-CD4 (clone GK1.5; BioLegend), anti-CD25 (clone 3C7; BioLegend), and anti-FoxP3 (clone MF-14; BioLegend). In the case of intracellular cytokine staining, splenocytes were cultured in RPMI 1640 medium containing 10% fetal calf serum, 2 mM L-glutamine, 100 U/ml penicillin, and 100 U/ml streptomycin in presence of phorbol-12-myristate-13-acetate (PMA) (50 ng/ml; Sigma), ionomycin (1 μg/ml; Sigma), and monensin (BioLegend) for 5 h. Cells were washed, fixed, permeabilized, and stained with anti-IL-17 (clone TC11-18H10.1; BioLegend). Viable single cells were analyzed based on forward and side light scatter properties with a CyFlow Cube 6 flow cytometer (Sysmex) or MACSQuant Analyzer 10 flow cytometer (Miltenyi Biotec).
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