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12 protocols using veleta

1

Ultrastructural Analysis of Olive Fly Scutellum

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The scutellum of 2 pharate adults, 4 just emerged adults (2 females and 2 males), 4 three day old adults (2 females and 2 males) and 8 ten-day-old adults (4 females and 4 males) of B. oleae were dissected from anaesthetized insects and fixed for 3 h in 2.5% glutaraldehyde in cacodylate buffer (Electron Microscopy Sciences, Hatfield, England), pH 7.2. The fixed scutelli were repeatedly rinsed in sodium cacodylate buffer and post-fixed for 1 h at 4 °C in 1% osmium tetroxide in sodium cacodylate buffer (Electron Microscopy Sciences). The samples were then repeatedly washed in the same buffer, dehydrated in ascending ethanol concentrations and finally embedded in an Epon-Araldite resin mixture (Sigma-Aldrich). Afterwards, ultra-thin sections were cut using a Leica EM UC6 ultramicrotome (Leica Microsystem GmbH, Wetzlar, Germany), collected on Parlodion (Spi-Chem, West Chester, PA, USA) coated copper grids, stained with uranyl acetate and lead citrate (Electron Microscopy Sciences, Hatfield, England) and examined using a Technai G2 Spirit BioTwin Transmission Electron Microscope (FEI company, Hillsboro, OR, USA) equipped with a CCD camera Veleta (EMSIS) 2048 × 2040.
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2

Transmission Electron Microscopy Analysis of Oligonucleotide Conjugates

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Dodecyl oligonucleotide conjugates were diluted to 5 µM in TAM buffer. The reactions were equilibrated for 3 h at 25 °C before a drop of this sample was adsorbed for 1 min on the copper grid covered with formvar film which was stabilized using carbon evaporation. Then excess of liquid was removed with filter paper, and a grid was placed for 5–10 s on a drop of 1% uranyl acetate, excess liquid was collected with filter paper. All grids were examined using a transmission electron microscope JEM-1400 (JEOL, Tokyo, Japan), and images were obtained using a Veleta (EM SIS, Münster, Germany) digital camera. All measurements were made using program package iTEM (EM SIS, Münster, Germany).
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3

Dual-Immunogold Labeling of GDPD5 and VWF

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HUVEC were fixed in 2% paraformaldehyde, 0.2% glutaraldehyde in 0.1 M PHEM buffer, pH 7.2. Samples were processed further for cryosectioning and immuno gold labelling as described.[73 (link)
] For double immunogold labelling of ultrathin cryosections the GDPD5 protein was marked with the rabbit antibody, diluted 1:20 in the first step, labelled by 10 nm protein A gold (CMC, Utrecht, the Netherlands). After stabilizing the components with 1% glutaraldehyde the second labelling step was directed against VWF, using the rabbit antibody diluted 1:100 and subsequently decorated with 15 nm protein A gold. Sections were analyzed at a transmission electron microscope, operated at 80 kV (Tecani12‐Biotwin, Thermo Fisher Scientific). Representative images were acquired on ditabis imaging plates (Ditabis, Pforzheim, Germany) and on a 2 K CCD camera (Veleta, EMSIS, Münster, Germany).
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4

Exosome Characterization by Negative Staining TEM

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For negative staining, a drop of exosomes was incubated for 1 min on a copper grid covered with formvar film, stabilized by carbon. Then, grids were exposed for 5–10 s on a drop of 0.5% uranyl acetate or 2% phosphotungstic acid. The grids holding the adsorbed exosomes, or ultrathin sections, were examined on a transmission electron microscope (TEM) (JEM 1400 (Jeol, Tokyo, Japan) with a digital camera Veleta (EMSIS, Münster, Germany)). Exosome measurements were made directly on the camera screen using iTEM (EMSIS, Münster, Germany) software.
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5

Ultrastructural Analysis of Embryo Samples

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At the 2-cell stage, a total of 82 embryos (58 SN, 24 NSN) and 48 embryos (30 SN, 18 NSN) were collected after parthenogenesis and ICSI, respectively. They were fixed in 2% paraformaldehyde, 2% glutaraldehyde in 0.1 M cacodylate buffer, pH 7.2 for three hours at room temperature. Next the samples were adsorbed to poly-L-lysin coated cover slips.12 Subsequently samples were post-fixed in 1% osmium tetroxide, 1.5% potassium ferrocyanide in 0.1 M cacodylate buffer, pH 7.2. Then they were stepwise dehydrated in ethanol, including en bloc 0.5% uranyl acetate staining during 70% ethanol. The coverslips were flat embedded in epon and polymerized. From the hardened sample the cover slip was removed and the epon bloc was ultrathin-sectioned at 70 nm. Sections were collected on copper grids and stained with lead. The samples were analyzed on a FEI-Tecnai 12 electron microscope (FEI, Eindhoven, The Netherlands) and imaged on a side-view camera (Veleta, EMSIS, Münster, Germany).
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6

Ultrastructural Analysis of Murine Femoral Bone

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Femurs of 3 weeks old mouse were removed and cut directly longitudinally into half in fixative, containing 2% glutaraldehyde, 2% paraformaldehyde, 20mM CaCl2, 20mM MgCl2 in 0,1M cacodylatbuffer, pH 7.4. The samples were fixed for 3 hours at room temperature. For post-fixation, specimen was incubated in 1% OsmO4, containing 1.5% KFeCN in 0.1 M cacodylate buffer, pH 7.4, followed by stepwise dehydration, uranyl-en-bloc staining and epon embedding. Ultrathin sections were cut from the area of interest and brought on formvar-filmed single-slot grids. Sections were counterstained with lead citrate and analyzed at a transmission electron microscope at 80kV (Tecnai-12-biotwin, Thermo-Fisher, Eindhoven, Netherlands). Representative images were taken with a 2K-CCD camera (Veleta, EMSIS, Muenster, Germany).
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7

Ultrastructural Analysis of ESC and Embryos

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The samples (ESC and embryos) were initially fixed with 2% PFA, 2% glutaraldehyde in 0.1 M cacodylate buffer, pH 7.4. After that, specimens were post‐fixed in 1% osmium tetroxide, 1.5% potassium ferrocyanide in 0.1 M cacodylate buffer, followed by stepwise dehydration in ethanol, including 0.5% uranyl acetate en bloc staining in 70% ethanol. Final dehydration was performed in propylenoxide, and samples were further embedded in epon. Ultrathin sections of 60 nm were cut using ultramicrotome (UC6, Leica), collected on copper grids, counterstained with lead and examined on a Tecnai‐12 transmission electron microscope at 80 kV (Thermo Fisher Scientific). Representative areas were imaged on a 2K CCD camera (Veleta, EMSIS).
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8

Peptide Fibrillization Characterization by TEM

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Peptide solutions of 150 μM were diluted
with 10 mM AA (pH 7.3–7.4) or 10 mM AA solution enriched with
either 150 mM NaCl or 1.15 μM heparin and sonicated for 3 min.
Peptide samples were incubated at 37 °C for 9 days without agitation
prior to TEM imaging. Peptide solutions were then spotted on freshly
glow-discharged carbon/Formvar-coated mesh grids. After blotting off
the excess liquid, the samples were contrasted by 2% uranylacetate
(Polysciences Inc., Cat No 21447-25) in water for 1 min, the excess
stain was blotted off, and grids were air-dried. Fibrillar structures
were imaged on an 80 kV Tecnai 12 (Thermo Fisher) TEM at 135k and
300k magnification using a 2k × 2k pixel CCD side-mounted camera
(Veleta, EMSIS GmbH).
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9

Ultrastructural Analysis of Mouse Hearts

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Hearts from freshly killed 12 week-old mice were removed, cut into halves and fixed in 2% paraformaldehyde, 2% glutaraldehyde in 0.1M cacodylate buffer, pH 7.2. The left ventricle was cut in smaller cubes and subsequently post-fixed in 1% osmiumtetroxide, 1.5% potassiumferrocyanide in 0.1M cacodylate buffer, pH 7.2. The samples were stepwise dehydrated in ethanol, including en bloc 0.5% uranyl acetate staining during 70% ethanol incubation. Blocks were embedded in epon then sectioned ultrathin at 70 nm. Sections were collected on copper grids and stained with lead. The samples were analysed on a FEI-Tecnai 12 electron microscope (FEI, Eindhoven, The Netherlands) and representative areas were imaged with a 2 K CCD camera (Veleta, EMSIS, Münster, Germany).
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10

Characterization of Extracellular Vesicles by TEM and NTA

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Morphology of the isolated extracellular vesicles (EVs) was assessed by transmission electron microscopy (TEM) as described previously [26 (link)]. Specific markers for exosomes, CD9 or CD63 were detected as described earlier [26 (link)] using 10 μL of vesicles mixed with 10 μL of 0.5% bovine serum albumin in PBS and 3 μL (100 μg/mL) of corresponding monoclonal antibodies (Abcam, Cambridge, UK). All grids were examined in JEM 1400 (Jeol, Tokyo, Japan) TEM supplied with digital camera Veleta (EM SIS, Muenster, Germany). The measurements were made directly on the camera screen using iTEM (EM SIS, Muenster, Germany) software, version 5.2.
The size and concentration of the isolated EVs were determined by NTA using the NanoSight® LM10 (Malvern Instruments, Malvern, Worcestershire, UK) analyzer, equipped with a blue laser (45 mW at 488 nm) and a C11440-5B camera (Hamamatsu Photonics K.K., Shizuoka, Japan), at several dilutions according to the manufacturer’s instructions. Each sample was measured in triplicate, with a camera setting of 15, an acquisition time of 60 s, and a detection threshold setting of 5. At least 200 completed tracks were analyzed per video. NTA analytical software version 2.3 (Malvern Instruments, Malvern, Worcestershire, UK) was used for data analysis and capture.
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