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145 protocols using l glutamine

1

Cell Culture and Viral Infection Protocols

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All cell lines (HEK293T, HeLa, Jurkat, THP-1) were purchased from American type culture collection (ATCC: #CRL-3216, #CCL-2, #TIB-152, #TIB-202). HEK293T and HeLa cells were cultivated in Dulbecco’s Modified Eagle Medium (DMEM, Gibco) supplemented with 10% (v/v) fetal bovine serum (FBS, Gibco), 100 U/ml penicillin (PAN-Biotech), 100 µg/ml streptomycin (PAN-Biotech) and 2 mM L-glutamine (PAN-Biotech) (hereafter called DMEM + 3). Jurkat and THP-1 cells were cultivated in Roswell Park Memorial Institute (RPMI, Gibco) 1640 medium supplemented with 10% (v/v) FBS (Gibco), 100 U/ml penicillin (PAN-Biotech), 100 µg/ml streptomycin (PAN-Biotech) and 2 mM L-glutamine (PAN-Biotech). Cells were tested for mycoplasma contamination by polymerase chain reaction (PCR) test and used if negative. Measles virus (MeV, Schwarz strain) was a generous gift from K.-K. Conzelmann (Max von Pettenkofer Institute, Ludwig-Maximilians-University Munich, Germany). Influenza A virus (strain PR8/34 H1N1) and encephalomyocarditis virus (EMCV, EMC strain) were purchased from ATCC (#VR-95, #VR-129B).
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2

HeLa and DLD-1 Cell Culture

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HeLa Flip-In T-REx EGFP-CENP-M (Basilico et al., 2014 (link)) were maintained in DMEM with 10% tetracycline-free FBS (Pan Biotech), supplemented 50 μg/mL Penicillin/Streptomycin (PAN Biotech), and 2 mM L-glutamine (PAN Biotech) at 37 °C in a 5% CO2 atmosphere. Flp-In T-REx DLD-1–CENP-C–AID-EYFP cells and Flp-In T-REx DLD-1-EYFP-AID-CENP-A/CENP-C-RFP-AID cells (Fachinetti et al., 2015 (link); Hoffmann et al., 2020 (link)) were a generous gift from D. Fachinetti (Institut Curie, Paris, France) and D. C. Cleveland (University of California, San Diego, USA). The cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM; PAN-Biotech) supplemented with 10% tetracycline-free fetal bovine serum (Thermo Fisher Scientific), 2 mM Penicillin/Streptomycin (PAN-Biotech), and 2 mM L-glutamine (PAN-Biotech) at 37 °C in a 5% CO2 atmosphere.
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3

Cell Culture Protocol for HEK293AD and CHO-K1 Cells

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HEK293AD cells (BioCat) were cultured in Dulbecco’s modified Eagle’s medium (DMEM) (PAN Biotech) supplemented with 10% (vol/vol) fetal bovine serum (FBS) (Biochrom AG), 1% l-glutamine (PAN Biotech), penicillin (100 U/mL), and streptomycin (100 μg/mL) at 37 °C and 5% CO2. CHO cells (ATCC CCL-61) were cultured in phenol red-free DMEM/F12 (Gibco) supplemented with 10% FBS (Biochrom AG), 1% l-glutamine (PAN Biotech), 100 U/mL penicillin, and 100 μg/mL streptomycin at 37 °C and 5% CO2. To passage cells, medium was aspirated, and cells were washed once with 5 mL of phosphate-buffered saline (PBS) (Sigma-Aldrich), followed by a second wash with trypsin 0.05%/(ethylenedinitrilo)tetraacetic acid 0.02% in PBS for 1 min, then resuspended in DMEM (for HEK293AD cells) or DMEM/F12 (for CHO-K1 cells).
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Culturing Caco-2 and HaCaT Cell Lines

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Human colon epithelial cells, Caco-2 (accession No 86010202, European collection of authenticated cell cultures (ECACC), Salisbury, UK), were grown in monolayers in Dulbecco’s Modified Eagle’s Medium (DMEM), supplemented with 10% inactivated calcium-free fetal calf serum (Gibco Laboratories, Grand Island, NY, USA), 100 U/mL penicillin/0.1 mg/mL streptomycin (PanBiotech GmbH, Aidenbach, Germany) and 2 mM L- glutamine (PanBiotech GmbH, Germany), at 37 °C and in an atmosphere containing 5% CO2 (CO2 Incubator; Thermo Scientific, Marietta, OH, USA) [28 (link)]. HaCaT (immortalized human keratinocyte) cells (accession No. 300493, Cell Lines Service GmbH, Eppelheim, Germany) were cultured in DMEM medium that was low in calcium (0.03 mM) and supplemented with 10% calcium-free fetal calf serum, 100 U/mL penicillin/0.1 mg/mL streptomycin and 2 mM L-glutamine (PanBiotech GmbH, Germany).
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Cell Culture Conditions for KBM-7 and HEK293T

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KBM-7 cells were cultured in IMDM supplemented with 10% fetal calf serum FCS (PAN-Biotech), 100 U/ml penicillin, 100 μg/ml streptomycin (PAN-Biotech) and L-glutamine (PAN-Biotech). HEK293T cells (DSMZ, Germany) were grown in DMEM high glucose supplemented with 10% FCS, penicillin (100 U/ml), streptomycin (100 μg/ml), and L-glutamine (PAN-Biotech).
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Cell Culture Protocols for Intestinal and Liver Cell Lines

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Human colonic epithelial cells, Caco-2 (accession No. 86010202, lot 16H030, ECACC), human Caucasian colon adenocarcinoma grade II cell line HT29-MTX-E12 (accession N° 12040401, lot 16D017, ECACC) and human Caucasian hepatocyte carcinoma cells HepG2 (accession No. 85011430, lot 16K046, ECACC) were cultured in monolayers in Dulbecco’s Modified Eagle Medium (DMEM) substituted with 10% heat-inactivated fetal bovine serum (FBS) (Gibco Laboratories, Grand Island, NY, USA), 100 U/mL penicillin/0.1 mg/mL streptomycin (PanBiotech GmbH, Hamburg, Germany) and 2 mM L-glutamine (PanBiotech GmbH, Germany). Cells were grown at 37 °C and 5% CO2 (CO2 Incubator, Thermo Scientific, Marietta, GA, USA) and sub-cultured when the monolayers reached 90% confluence. For sub-culturing, the monolayers were treated with trypsin–EDTA (PanBiotech GmbH, Germany).
The human Caucasian histiocytic lymphoma cell line U937 (accession No. 85011440, lot No. 11D008) was cultured in Roswell Park Memorial Institute (RPMI) 1640 Medium supplemented with heat-inactivated FBS (10%) penicillin (100 U/mL)/streptomycin (0.1 mg/mL) and L-glutamine (2 mM). Cells were grown at 37 °C and 5% CO2 and passaged every 2–3 days.
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7

Breast Cancer Cell Line Characterization

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BT-474 (ACC 64) and MCF-7 (ACC 115) breast cancer cell lines were obtained from the German Collection of Microorganisms and Cell Cultures (DSMZ). MCF-10A (CRL-10317), a non-tumorigenic mammary epithelial cell line, was obtained from the American Type Culture Collection (ATCC). ZR-75-1 (CRL1500, ATCC) and MDA-MB-453 (ACC 65, DSMZ) cells were purchased from DSMZ. The identity of all cell lines was confirmed by DNA finger printing analysis utilizing the GenePrint 10 System (Promega). BT-474 and MDA-MB-453 cells were cultivated in DMEM medium (Pan-Biotech) supplemented with 10% FCS (Sigma-Aldrich), 2 mM L-Glutamine (Pan-Biotech) and 1% Penicillin/Streptomycin (Pan-Biotech). ZR-75-1 and MCF-7 cells were propagated in RPMI 1640 medium (Pan-Biotech) supplemented with 10% FCS, 2 mM L-Glutamine and 1% Penicillin/Streptomycin. In addition to other components, the medium for MCF-7 cells contained 1 mM Sodium-Pyruvate (Sigma-Aldrich). MCF-10A cells were cultured in DMEM/F12 medium (Pan-Biotech) supplemented with 5% Horse serum (Sigma-Aldrich), 1% Penicillin/Streptomycin, 20 ng/ml EGF (Sigma-Aldrich), 0.5 μg/ml Hydrocortisone (Sigma-Aldrich), 10 μg/ml Insulin (Sigma-Aldrich) and 0.1 μg/ml Cholera toxin (Sigma-Aldrich).
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8

In Vitro Expansion of Dermal Fibroblasts

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Adult NHDF were obtained from Coriell (Camden, NJ, USA). Dermal fibroblasts from patients with PXE were provided according to the authors’ description in [28 (link)], who also listed the clinical characteristics of the PXE patients. The study was approved by the Ethics Committee of the HDZ NRW, Department of Medicine, Ruhr University of Bochum (registry no. 32/2008, approval date is 3 November 2008). Primary cells were maintained under standardized conditions (37 °C, 5% CO2) as a monolayer culture in tissue culture dishes (100 × 20 mm, Greiner bio-one, Frickenhausen, Germany) with Dulbecco’s modified Eagle’s medium without phenol-red addition (DMEM; Thermo Fisher Scientific, Waltham, MA, USA). DMEM was supplemented with either 10% (v/v) fetal calf serum (FCS; Biowest, Nuaillé, France) or 10% (v/v) lipoprotein-deficient FCS (LPDS) and 4 mM L-glutamine (PAN Biotech, Aidenbach, Germany), 1% (v/v) Penicillin-Streptomycin-Amphotericin B solution (100×; PAN Biotech, Aidenbach, Germany), as described previously [34 (link)]. The LPDS was prepared according to our previous work [28 (link)]. Medium changes were performed twice a week. The subculturing of near confluent primary NHDF was performed with an expansion ratio of 1:3 utilizing 0.05% (v/v) trypsin (PAN Biotech, Aidenbach, Germany) in Dulbecco’s phosphate buffered saline (PBS, 1×; Thermo Fisher Scientific, Waltham, MA, USA).
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Culturing Mammalian Cells in Optimal Conditions

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Cells were cultured in DMEM/F12 (1:1) supplemented with 10% FCS and 2 mM L-glutamine (all cell culture reagents were from PAN-Biotech, Aidenbach, Germany, unless stated otherwise) and grown in a humidified 37 °C incubator with 5% CO2. Medium was changed every 2–4 days. Cells were harvested by washing with PBS and detaching with trypsin when reaching about 70% confluence. To minimize alterations in morphology, proliferation, and response to stimuli, cells were maximally used up to passage number 45 and all experiments were performed within a range of 20 passages maximum.
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10

MDCK Cell Culture Protocol

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Madin-Darby
Canine Kidney (MDCK) cells
(ATCC cat. no.: CCL-34) were cultured in Dulbecco’s Modified
Eagle Medium (DMEM) supplemented with 10% fetal calf serum (FCS) (PAN-Biotech
GmbH, Germany), 1% penicillin/streptomycin (PAN-Biotech GmbH, Germany),
and 1% l-glutamine (PAN-Biotech GmbH, Germany). Cells were
passaged two times per week.
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