The largest database of trusted experimental protocols

84 protocols using quant

1

Quercetin Cytotoxicity on Hamster Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
To assess the toxicity of quercetin on mammalian cells, resident macrophages were obtained from golden hamsters by peritoneal lavage with 10 ml of a cold RPMI 1640 medium. Cells were plated (4 × 106 in 200 µl) for 1 h at 37°C in the presence of 5% CO2, and then, non-adherent cells were removed. Macrophage monolayers were treated in triplicate with quercetin (0–640 µM) for 48 h at 37°C/5% CO2. Controls were macrophage monolayers treated with RPMI or 1% of vehicle DMSO (the major final concentration), and the positive control for reduced cellular viability (disrupted cells) was obtained by adding 1% Triton X-100. The viability of macrophages was then assessed by measuring the mitochondrial-dependent reduction of MTT [3-(4, 5-dimethyl- 2-thiazol)-2, 5-diphenyl-2H-tetrazolium bromide)] to formazan. MTT (10 µl to 10 mg/ml) was added to cell cultures and incubated at 37°C/5% CO2 for 3 h. The medium was removed, and formazan crystals were dissolved in 180 µl of DMSO. The absorbance was read at 570 nm using a microplate spectrophotometer (µQuant, Biotek Instruments, Inc.). The 50% cytotoxic concentration (CC50) was determined by logarithmic regression analysis using GraphPad Prism 6 software.
+ Open protocol
+ Expand
2

MTT Cytotoxicity Assay Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
MTT assay was conducted in accordance with the previous study with slight modifications78 (link). Briefly, MDA MB-231, MCF-10A, and 4T1 cells were harvested, counted and seeded at 1 × 104 cells per well in the 96-well plate for 24 hours. The following day, cells were treated with various concentrations of the sample and incubated for 48 and 72 hours at 37 °C with 5% CO2. After that, 20 µL of 5 mg/mL MTT (Merck, USA) reagent was added to each well and incubated for 3 hours. Next, the solution was removed and 100 µL of dimethyl sulfoxide (DMSO) was added to the wells. Then, the plate was read at 575 nm by using the microtiter plate reader (µQuant, Bio-Tek Instrument). The results were analyzed as the percentage proliferation of thecells in respect to the concentration of the samples treated.
+ Open protocol
+ Expand
3

Quantification of Mineralized Bone-like Nodules

Check if the same lab product or an alternative is used in the 5 most similar protocols
At 10 and 14 days, the cultures were fixed with 4% formaldehyde in PB, pH 7.2, for 2 hours at RT and washed in the same buffer. The samples were then dehydrated in a graded series of alcohol and stained with 2% alizarin red S (Sigma), pH 4.2, for 8 min at RT. The mineralized bone-like nodule formation was visualized by epifluorescence microscopy and the calcium content was obtained by the quantification of color, which was evaluated by the colorimetric method10 and expressed as optical density. The absorbance was measured in a spectrophotometer (µQuant Biotek Instruments) at a wavelength of 405 nm.
+ Open protocol
+ Expand
4

MTT Assay for Cell Viability

Check if the same lab product or an alternative is used in the 5 most similar protocols
First, 2,000 cells were seeded into 96-well plates, incubated overnight and then treated with various concentrations of LK-A for 48 h. Then, 20 µl of MTT (5 mg/ml) was added to each well, and the plate was incubated at 37°C for 4 h. Subsequently, the supernatant was carefully removed, and 150 µl/well DMSO was added to dissolve the formazan crystals. The absorbance of the soluble product was measured with a microplate spectrophotometer at 490 nm (µQuant™; Biotek Instruments, Inc., Winooski, VT, USA). This experiment was performed in six replicates and repeated three times. We calculated the percentage of cell viability for each concentration of LK-A by using the following formula: Cell viability (%) = A570 nm (sample) / A570 (control DMSO) × 100. The half maximal inhibitory concentration (IC50) was determined with GraphPad Prism 5 (GraphPad Software, Inc., La Jolla, CA, USA).
+ Open protocol
+ Expand
5

Collagen Quantification in Hydrogels

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 7 and 14 days of culture, hydroxyproline assay was performed according to the published method to quantify the collagen synthesized by BSMC (hydroxyproline represents 12% of collagen (w/w)). (26 (link)) Acellular hydrogel samples were used as control. Briefly, all hydrogel samples were flash frozen in liquid nitrogen and lyophilized using a freeze dry system (Freezone 4.5, Labconco, USA). The lyophilized samples were then hydrolyzed in 4N NaOH at 120 °C for 4 hours and neutralized with citric acid (1.4N). Series concentrations (0–50%) of hydroxyproline (100µg/ml) dilutions were prepared as standards. Each of the samples and standards was mixed with 1 ml of chloramine-T and incubated at room temperature for 20 min. This was followed by addition of p-dimethylaminobenzaldehyde (PDMAB) and additional incubation at 65°C for 15 min. The light absorbance of samples was measured at λ=550 nm in triplicate using a universal microplate spectrophotometer (µQuant, Biotek Instruments Inc., USA).
+ Open protocol
+ Expand
6

Quantifying Hippocampal HSP-70 Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
For HSP-70 ELISA, hippocampi were snap-frozen in liquid nitrogen and weighed. Samples were homogenized for 15 s using a tissue homogenizer (Omni International, TH2000), followed by the addition of 50 µL of cold (4℃) 1×extraction buffer from the HSP-70 ELISA kit (Abcam, ab133060; Abcam, Cambridge, MA, USA). Following 30-min incubation on ice, samples were sonicated on level 7 with 12 pulses (Sonic Dismembrator 60; Fisher Scientific, Chicago, IL, USA) and centrifuged for 10 min at 21000×g in a 4℃ refrigerated microfuge. The supernatant was diluted 1 : 5 in sample diluent 2 (a component in HSP-70 ELISA kit); 100-µL duplicates were used in the ELISA, and the remaining supernatant was used for protein assays. Excess supernatant was stored at -70℃. The protocol provided with the HSP-70 ELISA kit was followed without any modifications for the quantification of HSP-70 protein levels. A µQuant (Bio-Tek Instruments, Inc., Winooski, UT, USA) was used to measure absorbance at 450 nm, and data were analyzed using Ascent for µQuant.
+ Open protocol
+ Expand
7

Quantification of Nitrite Levels

Check if the same lab product or an alternative is used in the 5 most similar protocols
The concentration of nitrite, the stable end-product of NO, in culture supernatants or plasma was determined by Griess’ reaction as described by Biswas et al. (2001) (link) with slight modifications. Briefly, plasma was incubated with trichloroacetic acid before addition of the Griess’ reagent and centrifuged to collect the supernatant. The cell-free supernatant obtained from plasma or PBMC cultures were incubated with equal volume of Griess’ reagent for 30 min at 37°C. Readings were taken at 540 nm in a microplate reader (µQuant, BioTek Instruments Inc., VT, USA). Nitrite content was quantified by extrapolation from a sodium nitrite standard curve.
+ Open protocol
+ Expand
8

Quantify Inflammatory Cytokines

Check if the same lab product or an alternative is used in the 5 most similar protocols
The cell-free fluid (peritoneal or air pouches cavities) obtained was used to quantify IL-1β, TNF-α, and IL-6 with commercial ELISA kits (R&D Systems, Minneapolis, MN, USA), according to the manufacturer´s instructions. Optical densities were measured at 405 nm in a microplate reader (µQuant, Biotek® Instruments, Inc., Winooski, VT, USA).
+ Open protocol
+ Expand
9

Oxaliplatin Cytotoxicity in Colorectal Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
SW620, SW620 OxR, HCT116, HCT116 OxR, HT29, HT29 OxR, SW480, and SW480 OxR cell lines were plated into tissue culture 96-well black-walled plates at a concentration of 3000 cells/well and incubated overnight at 37°C. A 10 mM stock oxaliplatin suspension was created by dissolving oxaliplatin (MedChemExpress) in molecular grade water via sonication and heating. Cell culture media was replaced with oxaliplatin treatments ranging from 0 to 1000 µM and incubated for 72 hr. Following treatments, an MTT assay (Abcam) was carried out according to the manufacturer’s protocol. The plates were then read using a plate reader (BioTek µQuant) at 590 nm absorbance using gen5 software. Control wells containing the MTT solution without cells were used for background subtraction.
+ Open protocol
+ Expand
10

Extracellular Matrix Mineralization Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Extracellular matrix mineralization was detected at day 21 by alizarin red staining (Sigma-Aldrich). Cells were fixed in 10% formalin for 2 h at room temperature, dehydrated and stained with 2% alizarin red pH 4.2 (Sigma-Aldrich) for 10 min. For qualitative analysis, culture images were captured with a high-resolution digital camera (Canon EOS Digital Rebel Camera, Canon, Lake Success, NY, USA). Then, calcium content was evaluated using a colorimetric method. Briefly, 280 μL of 10% acetic acid was added to each well stained with alizarin red, and the plate was incubated at room temperature for 30 min under shaking. The slurry was overlaid with 100 μL of mineral oil (Sigma-Aldrich), heated to 85°C for 10 min and transferred to ice for 5 min. The slurry was then centrifuged at 20,000 g for 15 min, and 100 μL of supernatant was transferred to a microcentrifuge tube with 40 μL of 10% ammonium hydroxide to neutralize the acid. The optical density was read at 405 nm (µQuant, Bio-Tek), and data were obtained in quintuplicate (n=5) and expressed as absorbance.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!