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5 protocols using albumax 1 lipid rich bsa

1

Anti-malarial Drug Sensitivity Testing

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Experiments reported in this study were performed using P. falciparum parasite strains Dd2 (86 (link)) and NF54 (87 (link)). The identities of these strains were confirmed by their expected drug-sensitivity profiles and were Mycoplasma-free by PCR test. Parasite culturing was done in Roswell Park Memorial Institute medium (RPM1-1640, Thermo Fisher 23400021) supplemented with 2.5 g/L Albumax I Lipid-Rich BSA (Thermo Fisher 11020039), 15 mg/L hypoxanthine (Sigma H9636), 110 mg/L sodium pyruvate (Sigma P5280), 1.19 g/L HEPES (Sigma H4034), 2.52 g/L sodium bicarbonate (Sigma S5761), 2 g/L glucose (Sigma G7021), and 10 mg/L gentamicin (Invitrogen Life Technologies 15750060). Parasite cultures were maintained at 2% hematocrit in deidentified human erythrocytes obtained from the University of Utah Hospital blood bank, at 37°C, and at 5% O2, 5% CO2, 90% N2. For growth assays with decyl-ubiquinone (dQ, Caymen Chemicals 55486005) and/or proguanil (Sigma 637321), the growth medium was supplemented with 15 µM dQ (DMSO) and/or 1 µM proguanil (DMSO), final concentration. In all cases, the final DMSO concentration was limited to ≤0.3% w/v.
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2

Production and Infection of HEV in Cells

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After electroporation of PLC3 cells with p6-wt, p6-V1 or p6-V2 RNA or PBS, 1 × 106 cells were seeded into T-75 flasks in DMEM complete medium. Eight hours after seeding, the medium was changed to HEV medium: DMEM/M199 (1v:1v), 1 mg/ml of lipid-rich albumin (AlbuMAX™ I Lipid-rich BSA, ThermoFisher Scientific), 1% non-essential aa and 1% pyruvate sodium (ThermoFisher Scientific). Then, the HEV producing cells were incubated at 32°C and 5% CO2 for 10 days.
Next, Huh-7.5 cells seeded into coated 96-well plates (8,000 cells/well) were infected with undiluted and serially diluted supernatants from HEV-producing cells. The inoculum was removed after 8 h and cells were overlaid with fresh medium. Three days post-infection at 37°C and 5% CO2, cells were fixed and processed for indirect immunofluorescence with anti-ORF2 antibody 1E6 (Millipore). For confocal microscopy analysis, Huh-7.5 cells were seeded on glass coverslips in 24-well plates and infected with 500 μl of undiluted infectious cell supernatant.
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3

Radiolabeled Isoprenoid Biosynthesis in Plasmodium falciparum

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AlbuMAX I Lipid-Rich BSA and RPMI-1640 were purchased from Thermo Fisher Scientific (Leicestershire, UK). Dolichol and dolichyl-P 13–21 were purchased from Avanti (Alabama, USA). [1-(n)-3H] GGOH (14 Ci/mmol; 1 mCi/mL), [1-(n)-3H] FOH (14 Ci/mmol; 1mCi/mL) and L-[4,5-14C (U)] isoleucine (200–300 mCi/mmol; 0.1 mCi/mL) were purchased from American Radiolabeled Chemicals (St. Louis, USA). SYBR Green I nucleic acid gel stain and SYTO 11 were purchased from Thermo Fisher Scientific (Waltham, Massachusetts, EUA). Sterile stock solutions were prepared at 10 mM for fosmidomycin sodium salt hydrate in water, 2 mM clindamycin hydrochloride in water, 125 mM of GGOH in ethanol and 200 mM of each other non-radiolabelled prenols in ethanol. All other reagents were purchased from Sigma (St. Louis, Missouri USA) or specific companies, as cited in the text. Polyprenyl phosphates were obtained by mild acid treatment of the respective commercial pure pyrophosphates (Sigma; Sigma codes F6892 and G6025) [53 (link)]. For this work, a Cre-LoxP P. falciparum NF54 strain [54 (link)], a generous gift of Moritz Treeck (The Francis Crick Institute, London, United Kingdom), was employed. Erythrocytes and CPDA-1 treated hospital-grade plasma bags for transfusions (AB+) were obtained from the Blood Center of Sírio Libanês Hospital (São Paulo, Brazil).
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4

Cultivation of Colon Cancer Stem Cells

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An LGR5-positive colon cancer stem cell line PLR123 was cultured in cell culture flasks (Corning) in SCM which consisted of DMEM/F-12 (Cat# 11330-057) supplemented with 1× Antibiotic-Antimycotic, 1× N-2 Supplement, 4 mg/mL AlbuMAX I Lipid-Rich BSA, 20 ng/mL human EGF, 20 μg/mL human insulin (all from Thermo Fisher Scientific), 2.9 mg/mL glucose (Merck, total 6.0 mg/mL glucose), 4 μg/mL heparin (Merck), and 10 ng/mL human FGF2 (Reprocell) at 37 °C under 5% CO2 as described previously8 (link). The colorectal cancer cell lines LoVo and LS174T (both from ATCC) were grown in F-12K (Thermo Fisher Scientific) supplemented with 10% heat-inactivated fetal bovine serum (FBS) or Eagle’s MEM supplemented with 1% Non-Essential Amino Acids Solution, 1 mM Sodium Pyruvate (all from Thermo Fisher Scientific), and 10% FBS, respectively, at 37 °C under 5% CO2. The cell lines were adapted to SCM before used in 3D cultures.
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5

Plasmodium falciparum Parasite Cultivation

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All experiments were performed using Plasmodium falciparum Dd2 (Wellems et al., 1990 (link)), ACPL-GFP D10 (Waller et al., 2000 (link)), or ACPL-GFP PfMev NF54 (Swift et al., 2020 (link)) parasite strains, which were obtained from colleagues and verified by confirming their expected drug sensitivity and/or sequencing strain-specific genetic markers. Parasite culturing was performed as previously described (Sigala et al., 2015 (link)) in Roswell Park Memorial Institute medium (RPMI-1640, Thermo Fisher 23400021) supplemented with 2.5 g/L Albumax I Lipid-Rich BSA (Thermo Fisher 11020039), 15 mg/L hypoxanthine (Sigma H9636), 110 mg/L sodium pyruvate (Sigma P5280), 1.19 g/L HEPES (Sigma H4034), 2.52 g/L sodium bicarbonate (Sigma S5761), 2 g/L glucose (Sigma G7021), and 10 mg/L gentamicin (Invitrogen Life Technologies 15750060). Cultures were maintained at 2% hematocrit in human erythrocytes obtained from the University of Utah Hospital blood bank, at 37°C, and at 5% O2, 5% CO2, 90% N2. Cultures were mycoplasma-free by PCR test.
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