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7 protocols using nucview 488 caspase 3 assay kit for live cells

1

Quantifying Engineered Cell Death

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To assess the activity of engineered suicide genes, StaPLd-Casp9-expressing or iCasp9-expressing HeLa cells were stained after drug incubation. Media were collected to harvest dead/lifted cells, adherent cells were trypsinized to harvest living cells, and the two were pooled and pelleted at 500g for 5 min. Cells were washed once with HBSS, resuspended in either HBSS or Annexin V Binding Buffer (Biotium), and stained with the NucView 488 Caspase-3 Assay Kit for Live Cells (Biotium) or the Annexin V CF488A Conjugate kit (Biotium), respectively, according to manufacturer’s instructions. In some instances, cells of the parent cell line (Flp-In HeLa) were annexin V-stained in parallel. For medium-term preservation, cells were fixed in 4% PFA in PBS for 15 min at ambient temperature following staining, centrifuged at 10,000g, and resuspended in HBSS after aspirating the PFA. For microscopy, a 25 μL droplet of each sample was then placed on a Superfrost Plus glass slide (Fisher Scientific), and allowed to dry partially, before adding Vectashield Mounting Medium with DAPI (Vector Labs) and a #1.5 cover glass (Fisher Scientific). Slides were sealed with clear nail polish and kept at 4 °C.
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2

Quantifying Apoptosis in Explant Cultures

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+/− treated explant pairs were cultured for 2 hr (chicken) or 3 hr (mouse) before the addition of 5 μM NucView 488 Caspase-3 Assay Kit for live cells (Biotium) and cultured for an additional 1 hr. Samples were then fixed for 1 hr at 4°C in 4% formaldehyde/PBS. Samples were then washed into PBST and explant pairs were mounted on superfrost slides (VWR) in Prolong Gold anitfade reagent (Molecular Probes) for imaging on a Zeiss 710 confocal microscope. Quantification of NucView cell staining was performed using Volocity v6.0.1 imaging software (Perkin Elmer) and statistical analyses done using either t-tests or Mann–Whitney tests with Sigmaplot v12.0 software.
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3

Caspase-3 Activity Quantification in Cells

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Caspase-3 activity was detected using NucView 488 Caspase-3 Assay Kit for Live Cells (Biotium, Catalog No. 30029). Briefly, A375 and A375-R cells were seeded in 10 cm plates, treated with vehicle or compound for 72 h, and then the cells were trypsinized and resuspended at a density of 1 × 106 cells/mL. Cell suspension (0.2 mL) was pipetted into a test tube and incubated with a 5 µM NucView 488 substrate concentration for 30 min at room temperature in the dark. After that, 300 µL of PBS was added into each test tube and analyzed by flow cytometry. The intensity of the fluorescence was measured at an excitation wavelength of 485 nm and an emission wavelength of 515 nm.
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4

Quantifying Engineered Cell Death

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To assess the activity of engineered suicide genes, StaPLd-Casp9-expressing or iCasp9-expressing HeLa cells were stained after drug incubation. Media were collected to harvest dead/lifted cells, adherent cells were trypsinized to harvest living cells, and the two were pooled and pelleted at 500g for 5 min. Cells were washed once with HBSS, resuspended in either HBSS or Annexin V Binding Buffer (Biotium), and stained with the NucView 488 Caspase-3 Assay Kit for Live Cells (Biotium) or the Annexin V CF488A Conjugate kit (Biotium), respectively, according to manufacturer’s instructions. In some instances, cells of the parent cell line (Flp-In HeLa) were annexin V-stained in parallel. For medium-term preservation, cells were fixed in 4% PFA in PBS for 15 min at ambient temperature following staining, centrifuged at 10,000g, and resuspended in HBSS after aspirating the PFA. For microscopy, a 25 μL droplet of each sample was then placed on a Superfrost Plus glass slide (Fisher Scientific), and allowed to dry partially, before adding Vectashield Mounting Medium with DAPI (Vector Labs) and a #1.5 cover glass (Fisher Scientific). Slides were sealed with clear nail polish and kept at 4 °C.
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5

Caspase-3 Activation in Oxidative Stress

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Cells were cultured in a 96-well plate at a density of 3000–6000 cells/well and allowed to attach overnight at 37°C. Following day, cells were supplemented with Fluorobrite DMEM media and pre-treated with 10 mM NAC for 1 hour at 37°C before being treated with 400 μM H2O2 for 30 minutes. Cells were analyzed for apoptosis using the NucView 488 Caspase-3 Assay Kit for Live Cells (Biotium) following manufacturer’s protocol. Briefly, cells were treated with 5 μM of the Caspase-3 substrate for 30 minutes at room temperature, before being imaged using the IncuCyte ZOOM (Sartorius) system. All the treatments were continued for the entire length of the experiment.
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6

Cytotoxicity Evaluation and Apoptosis Analysis

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Dulbecco’s Modified Eagle Medium (DMEM), Fetal Bovine Serum (FBS), (Gibco, Auckland, New Zealand), RPMI 1640 medium, Penicillin-Streptomycin, MTT (3- (4,5-dimethylthiazol-2-yl) -2,5-diphenyltetrazolium bromide), Phosphate-buffered saline (PBS) (Sigma, St. Louis, MO, USA), and DMSO (Dimethyl Sulfoxide) (Merck, Hohenbrunn, Germany), were used to evaluate the cytotoxic activity. Moreover, petroleum ether, dichloromethane, and methanol (Merck, Hohenbrunn, Germany) were used for plant fractionation. The NucView™ 488 Caspase-3 assay kit for live cells (Biotium, Hayward, CA, USA) and Annexin V-FITC Apoptosis Detection kit (BioVision Research Products, Mountain View, CA, USA) were used in apoptosis assays. Also we used 5-Flourouracil (5-FU) (Sigma, St. Louis, MO, USA) as the positive control.
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7

Apoptosis and Proliferation of Neutrophil Subsets

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Apoptosis was measured by imaging with NucView 488 Caspase-3 assay kit for live cells (Biotium). Sorted human neutrophil subsets were cultured in complete RPMI 1640 medium and incubated in in 5% CO2 tissue culture incubator at 37°C. After 24 hours, the culturing medium was replaced with fresh medium containing 5 μM NucView 488 substrate stock solution, and cells were incubated with substrate at RT for 30 minutes. Cells were then pelleted down, washed with PBS, placed on a glass slide, and imaged by an Olympus BX51 Ostometric fluorescence microscope with excitation at 485 nm.
Survival of sorted neutrophil subsets in vitro under different culture conditions was measured by CellTiter-Glo luminescent cell viability assay from Promega based on the manufacturer’s instruction.
Proliferation of sorted neutrophil subsets was measured by FACS with anti–human Ki67-APC (clone 20Raj1, catalog 17-5699-42, eBioscience) staining.
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