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7 protocols using spiroepoxide

1

Exosome-Mediated HIV-1 Transmission

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Trans-well co-cultures were carried out in 12-well plates using Cell Culture Insert Falcon Membrane (25 mm diameter, 0.4 μm pore size, Becton–Dickinson). For preparation of exosome-donor cells, CD4+ T lymphocytes were activated for 48 h, and then infected with spinoculation with 200 ng CAp24 equivalents of (VSV-G) wtHIV-1/106 cells or equivalent amounts of the Δnef derivative. After additional 72 h, the percentage of HIV-1 infected cells was evaluated by Gag-specific FACS analysis. In the presence of at least 25 % of infected cells, cell cultures were seeded in the upper chamber of trans-well plates while HIV-1 latently infected autologous CD4+ T lymphocytes obtained as described above were seeded in the bottom chamber. AZT was then added to the co-cultures which were run for 48 h in the presence or not of 1 μM of either GW4869 (Sigma) and spiroepoxide (Santa Cruz) inhibitors of exosome synthesis [39 (link)–43 (link)], TAPI-2 [30 (link)], or anti-TNFα Abs. Thereafter, target lymphocytes seeded in the bottom chambers were analyzed by FACS for the expression of intracytoplasmic HIV-1 CAp24.
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2

Exosome Induction Assay for NM-HA Cell Viability

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Treatment of NM-HAagg s2E cells with spiroepoxide (5 µM; Santa Cruz), imipramine (10 µM; Sigma), or DMSO was performed for 72 h in exosome-depleted medium in T175 flasks. Afterward, the total numbers of viable cells and their viability upon drug treatment were determined with the Vi-CELLXR Cell Viability Analyzer (Beckman Coulter). Exosomes were isolated from the conditioned medium via UC and processed for the aggregate induction assay as described above.
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3

Glycosidase-mediated Protein Deglycosylation

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MG132, Z-VAD-FMK (Selleckchem); MLN4924, GW4869 (Sigma); chloroquine (Invivogen); concanamycin A, rapamycin (Enzo); spiroepoxide (Santa Cruz); staurosporine (CST). Recombinant glycosidases PNGaseF and EndoH, and the substrate recombinant RNaseB protein were purchased from New England Biolabs.
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4

In Vitro and In Vivo CDC Conditioning

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CDCs were grown to confluence in T175 flasks. For in vitro studies, CDCs were conditioned for 15 days in 20 μM GW4869 (Sigma Aldrich), serum-free media, or serum-free media containing an equivalent volume of DMSO. For in vitro transwell insert assays of cardiomyocyte stress, we treated CDCs with 20 μM GW4869 (Sigma Aldrich), or 5 μM Spiroepoxide (Santa Cruz Biotechnology) for 12 hr. CDCs were then washed three times in PBS and supplanted with serum-free media. Inserts containing treated CDCs were then added into six-well plates containing cardiomyocytes. For in vivo studies, CDCs were treated with 20 μM GW4869 or an equivalent volume of DMSO for 12 hr. Prior to injection, CDC flasks were washed twice with PBS, trypsinized, and counted; 105 CDCs were injected per animal.
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5

Inhibition of N-SMase in Mice

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CD1 (ICR) mice were purchased from Charles River Inc. (Wilmington, MA, USA). An N-SMase inhibitor, spiroepoxide (Santa Cruz), was intraperitoneally injected into 50-day-old male mice at 3.5 mg/kg every two day. Fourteen days later, mice treated with spiroepoxide were euthanized and the small intestine sections were subjected to small EV collection or immunofluorescence analysis as described previously [24 (link)]. All animal care was performed according to the protocols approved by the Committee for the Use and Care of Experimental Animals of the Japanese Foundation for Cancer Research (No.17-02-1, 31 5 2017).
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6

Exosome Inhibition Modulates HIV-1 Infection

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Trans-well co-cultures were carried out in 12-well plates using Cell Culture Insert Falcon Membrane (25 mm diameter, 0.4 μm pore size, Becton Dickinson). They were set up by putting 106 F12/Hut-78 or parental Hut-78 cells in the upper chamber, while 2 × 106 unstimulated CD4+ T lymphocytes were seeded in the bottom chamber. The co-cultures were then run overnight in the presence or not of 1 μM of the inhibitors of exosome release GW4869 (Sigma) and Spiroepoxide (Santa Cruz). Then, CD4+ T lymphocytes were recovered and infected with HIV-1, washed, and left in culture 3 days in the presence or not of 10 μM AZT. Afterwards, lymphocytes were analyzed by FACS for the HIV-1 expression through the detection of intracytoplasmic HIV-1 CAp24.
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7

Semiquantitative EV Detection In Vitro

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For semiquantitative detection of EVs in vitro, anti-mouse CD63 antibodies (Y-18, Santa Cruz Biotechnology) were coupled to 4 μm aldehyde/sulfate latex beads (Invitrogen) by incubating 35 μg of v with 1 × 108 beads, followed by blocking of remaining activated groups with 4% BSA in PBS44 (link).
In all, 2 × 105 MC38 tumour cells were seeded per well into 24-well plates in RPMI 1640 with 10% FCS in the presence of 0, 5 and 10 μM spiroepoxide, an inhibitor of neutral sphingomyelinase 2 (Santa Cruz Biotechnology). Twenty-four hours later, these supernatants were collected. Cell culture supernatants were filtered through 0.22-μm filters. Filtrates (100 μl) were incubated with 20,000 anti-CD63-coupled beads overnight at room temperature with gentle shaking. Beads were washed and incubated with phycoerythrin-anti-CD9 (MZ3, BioLegend, San Diego, CA, USA) for 30 min on ice. After washing in 2% BSA in PBS, the beads were analysed using FACS.
For inhibition of EV production in vivo, on day 0, 2-month-old mice were intraperitoneally injected with spiroepoxide in 200 μl PBS (2 g kg−1 body weight per mouse) or 200 μl of 3.75% DMSO PBS control every 48 h for 12 days (six injections total). Mice were killed 24 h after the final injection.
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