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Rt qpcr mrna sybr green detection kit

Manufactured by Takara Bio
Sourced in Japan

The RT-qPCR mRNA SYBR Green Detection kit is a reagent for the quantitative analysis of mRNA expression levels using real-time reverse transcription-polymerase chain reaction (RT-qPCR) technology. The kit utilizes SYBR Green, a fluorescent dye that binds to double-stranded DNA, to detect and quantify the amplified mRNA targets.

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2 protocols using rt qpcr mrna sybr green detection kit

1

Quantitative Analysis of p62 Expression

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The expression of the p62 gene was detected by RT-qPCR. The primers for the p62 and GAPDH genes were synthesized by Shanghai Sangon Biotech, and the sequences were as follows: p62 forward, 5’-AGGCGCACTACCGCGAT-3’ and reverse, 5’-CGTCACTGGAAAAGGCAACC-3’; GAPDH forward, 5’-GGTCGTATTGGGCGCCTGGTC-3’ and reverse, 5’-TGACGGTGCCATGGAATTTGCCA-3’. Total RNA was extracted from primary PTC samples and matched adjacent normal thyroid tissue samples, TPC-1 and p62-KO-TPC-1 cells (continuously cultured in puromycin-free medium for ≥4 weeks) using TRIzol® reagent (Invitrogen; Thermo Fisher Scientific, Inc.), and the PrimeScript RT reagent Kit with gDNA Eraser (TaKaRa, Osaka, Japan) was used to remove genomic DNA and synthesize complementary DNA (cDNA). Quantitative real-time PCR was performed in triplicate using the RT-qPCR mRNA SYBR Green Detection kit (TaKaRa, Osaka, Japan). The threshold cycle (Ct) value was recorded, and changes in mRNA levels were determined by the 2-ΔΔCt method using GAPDH for internal crossing normalization.
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2

CCDC67 Gene Expression Analysis by RT-qPCR

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The expression of CCDC67 gene was detected by RT-qPCR. The primers of CCDC67 and GAPDH genes were synthesized by Shanghai GeneChem Co., Ltd., and the sequences were as follows: CCDC67 forward, 5′-GAGGATCCCCGGGTACCGGTCGCCACCATGGAGAACCAAGCCCATAATAC-3′ and reverse, 5′-TCACCATGGTGGCGACCGGTATGTGTCTATTTTGTTTTAGC-3′; GAPDH forward, 5′-TGAAGGTCGGAGTCAACGG-3′ and reverse, 5′-CTGGAAGATGGTGATGGGATT-3′. Total RNA was extracted from TPC-1 and TPC-1-Luc-Puromycin-CCDC67 cells (continuously cultured in puromycin-free medium for ≥4 weeks) using TRIzol® reagent (Invitrogen; Thermo Fisher Scientific, Inc.), and 1 µl total RNA was reverse-transcribed to cDNA using PrimeScript™ II kit (Takara Bio, Inc.) according to the manufacturer's protocol. The resulting cDNA was quantified using a RT-qPCR mRNA SYBR Green Detection kit (Takara Bio, Inc.). The resulting cDNA (2 µl) was used as the template for PCR in a 20-µl reaction volume containing 10 µl 2X SYBR Premix Ex Taq II, 0.8 µl each of 10 µmol/l forward and reverse primers and 6.4 µl ddH2O. The thermocycling conditions were as follows: 5 sec at 95°C, followed by 50 cycles of 95°C for 5 sec, 60°C for 50 sec. The mRNA expression level of GAPDH was used for normalization. The threshold cycle (Cq) value was recorded, and the data were analyzed by the comparative 2−ΔΔCq method (15 (link)).
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