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Anti ikkα

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Anti-IKKα is a laboratory reagent used for the detection and quantification of IKKα (Inhibitor of NF-κB Kinase Subunit Alpha) in various biological samples. IKKα is a key component of the NF-κB signaling pathway, which plays a crucial role in regulating immune and inflammatory responses. This product can be utilized in techniques such as Western blotting, immunoprecipitation, and ELISA to study the expression and activity of IKKα in research applications.

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8 protocols using anti ikkα

1

Histone Acetylation Assay Protocol

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14C-labeled acyl-coenzyme A (acetyl-CoA, malonyl-CoA, and succinyl-CoA) was purchased from PerkinElmer (Waltham, MA, USA). Calf thymus histone and unlabeled acyl-coenzyme A were purchased from Sigma-Aldrich (St. Louis, MO, USA). For western blotting, the following antibodies were used: anti-IKKα (Santa Cruz, sc-7218) (CA, USA), anti-HDAC2 (ABR, PA I-861) (Golden, CO, USA), anti-acetyl histone H3 (Millipore, 06-594) (Bedford, MA, USA), anti-E1A-binding protein p300 (p300) (Santa Cruz, sc-585), and anti-CREB-binding protein (CBP) (Abcam, ab3652) (Cambridge, UK).
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2

Western Blot Analysis of Apoptosis and Autophagy

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The Western blot analysis was performed as we described earlier[25 (link)].Primary antibodies used were anti-Bax (1:500, Santa Cruz, SC-20067), anti-Bcl2 (1:1000,Santa Cruz, SC-509),anti-cleaved Caspase-3(1:500, Proteintech, 25546-1-AP),anti-LC3A/B(1:500,Cell Signaling Technology Technology, #12741),anti-Beclin-1(1:1000,Cell Signaling Technology, #3495),anti-Atg5(1:1000,Cell Signaling Technology, #12994), anti-Atg12(1:1000,Cell Signaling Technology, #4180), anti-IKKα(1:500, Santa Cruz, SC-11930),anti-IKKβ(1:500, Santa Cruz, SC-8943), anti-NF-κB p65(1:500, Santa Cruz, SC-372),anti-GAPDH(1:2000,Proteintech, 60004-1-lg). Secondary antibodies used in immunoblotting studies were HRP-conjugated (1:5000,Jackson Immuno Research).Signals were revealed by enhanced chemiluminescence kit (Millipore).
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3

Comprehensive Antibody Panel for Cellular Analysis

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The following antibodies were used: anti-STRAP(611346, BD Biosciences, San Jose, CA), anti-TAK1(sc-7162, Santa Cruz Biotechnology, Santa Cruz, CA), anti-p-p65(3033,Cell Signaling Technology, Danvers, MA), anti-p65 (sc109, Santa Cruz Biotechnology), anti-IKKα (sc-7218, Santa Cruz Biotechnology), anti-p-IKKα/β (2697, Cell Signaling Technology), anti-IκBα (sc-371, Santa Cruz Biotechnology), anti-Myc (2276, Cell Signaling Technology), anti-GFP (sc-9996, Santa Cruz Biotechnology), anti-Tubulin (G094, ABM Inc, Richmond, Canada), and anti-Lamin A/C (2032, Cell Signaling Technology).
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4

Immunostaining Procedure for Animal Tissues

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We purchased pyridostigmine bromide (PB), permethrin (Per), Neomycin trisulfate hydrate, Enrofloxacin, and Ribavirin from Sigma-Aldrich (St. Louis, MO, USA). Anti-claudin-2, anti-MyD88, anti-MCP-1, and anti-β-actin primary antibodies were purchased from Abcam (Cambridge, MA, USA). anti-β-tubulin, anti-TLR3, anti-TLR7, anti-IKKα, anti-p65, and anti-IL6 primary antibodies were purchased from Santacruz Biotechnology (Dallas, TX, USA) while anti-TRAF6 was purchased from Abclonal Technology (Woburn, MA, USA). Species-specific biotinylated conjugated secondary antibodies and Streptavidin-HRP (Vectastain Elite ABC kit) were purchased from Vector Laboratories (Burlingame, CA, USA). Fluorescence-conjugated (Alexa Fluor) secondary antibodies and ProLong Diamond antifade mounting media with DAPI were purchased from Thermofisher Scientific (Grand Island, NY, USA). All other chemicals used in this study were purchased from Sigma unless otherwise specified. Animal tissues were paraffin-embedded and sectioned into slides by AML laboratories (Baltimore, MD, USA).
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5

Western Blot Analysis of OSCC Proteins

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Total protein from OSCC tissue samples and cells was extracted using RIPA lysis buffer containing 1% protease inhibitor (Sigma). 50ug of protein was loaded on a 10% sodium dodecyl sulphate‐polyacrylamide gel electrophoresis and separated by electrophoresis. Then, the protein was transferred to polyvinylidene fluoride membranes (Merck Millipore). After blocking non‐specific binding sites with 5% non‐fat milk, the membranes were incubated with the following primary antibodies: anti‐IKKα (sc‐7606, 1:500; Santa Cruz Biotechnology), anti‐Naa10p (sc‐3739201:1000; Santa Cruz), anti–E‐cadherin (9782, 1:1000; Cell Signaling Technology, CST), anti‐Snail (9782, 1:1000; CST), anti‐Slug (9782, 1:1000; CST), anti–Claudin‐1 (9782, 1:1000; CST), anti‐Smad2 (5339, 1:1000; CST), anti–p‐Smad2 (3108, 1:1000; CST), anti‐Smad3 (9523, 1:1000; CST), anti–p‐Smad3 (9520, 1:1000; CST), anti–β‐Actin (TA09, 1:1000; ZSGB‐BIO, Beijing, China) overnight at 4℃. Next, the membranes were washed with TBST and incubated with peroxidase‐conjugated IgG antibody at room temperature for 2 hours, and the immune complex was visualized by using enhanced chemiluminescence (34094; Pierce).
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6

Immunoblotting of NF-kB Signaling Pathway

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Total cellular extracts were prepared using 1X Cell Lysis Buffer (Cell Signaling Technology, USA) supplemented with 1 mM PMSF. Protein concentration was determined using the Bradford assay. Cell extracts were subjected to sodium do-decyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and gels were transferred to Hybond ECL nitrocellulose membranes (GE Heathcare, Germany) for 100 min at 90 V. The membranes were blocked with 5% skim milk in 1X tris-buffered saline (TBS) containing 0.1% Tween 20 (TBS-T) for 1 h at room temperature. The following antibodies were used for protein detection: anti-IκBα, anti-p65, anti-IKKα, anti-IKKβ, anti-MyD88, anti-IRAK1, anti-TRAF6, anti-TAK1, anti-actin antibodies (Santa Cruz Biotechnology Inc.), anti-phosphorylated TAK1 (p-TAK1) at Ser 412, anti-p-IKKα/β at Ser176/180, anti-p-IκBα at Ser32, and anti-p-Akt at Ser473 antibodies (Cell Signaling Technology, USA), and anti-p-IRAK-1 at Thr209 (Abcam, USA). After successful washes, the membranes were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies for 1 h. Blots were developed using West Pico Western blot detection kit (Thermo Fisher Scientific).
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7

Molecular Profiling of Prostate Cancer

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Dorsolateral prostate tissue from treated and control groups were subjected to preparation of total tissue lysate and isolation of cytosolic and nuclear fractions as described previously [38 (link)]. For Western blotting, 25 μg of protein was resolved over 4–20% Tris-glycine polyacrylamide gel and then transferred onto the nitrocellulose membrane. The blots were blocked using 5% non-fat dry milk and probed using appropriate primary antibodies overnight at 4°C. The antibodies used were anti-IKKα (sc-7218), anti-IKKβ (sc-34673), anti-NF-κB/p65 (sc-8008), anti-NF-κB/p50 (sc-8414), anti-IκBα (sc-1643) anti-p-IκBα (sc-8404), anti-Bax (sc-493), anti-Bcl2 (sc-7382), anti-COX-2 (sc-795), anti-cyclin D1 (sc-533), anti-PCNA (sc-56), and anti-VEGF (sc-152) procured from Santa Cruz Biotechnology, Santa Cruz, CA. Antibodies including anti-cleaved caspase-3 (#9661), anti-Bcl-xL (#2762), anti-p-IKKα/β (#2078) were purchased from Cell Signaling Technology, Danvers, MA. Anti-β-actin (#A1978) was obtained from Sigma-Aldrich, St. Louis, MO. The membrane was then incubated with appropriate secondary mouse (sc-2005) and rabbit (sc-2004) antibody horseradish peroxidase conjugate (Santa Cruz Biotechnology) followed by detection using chemiluminescence ECL kit (GE Healthcare Biosciences). For equal loading of proteins, the membrane was probed with appropriate loading controls.
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8

Plasmids, Recombinant Proteins, and Antibodies

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Plasmids, recombinant proteins and antibodies DDX3 and K7 expression constructs (in pCMV-myc, pCMV-Ha or pHisParallel2) have been described in our previous studies [3, (link)4] (link). IKKα-Flag and NIK-Flag were provided by Prof. Luke O'Neill (Trinity College Dublin), and Flag-IRF7 was provided by Prof. Kate Fitzgerald (University of Massachusetts). GST (glutathione-S-transferase)-IRF7 (aa 468-503) peptides and constructs were kindly provided by Prof. John Hiscott and Dr Qiang Sun (McGill University, Montreal). Purified recombinant protein kinase GST-IKKα was purchased from Millipore and recombinant GST-NIK was purchased from Proqinase (Freiburg, Germany). The antibodies used were anti-Flag-M2 mAb (Sigma-Aldrich), anti-Myc mAb clone 9E10 (Sigma-Aldrich), anti-HA (hemagglutinin) mAb (Covance), anti-DDX3 (Santa Cruz or Bethyl Laboratories), anti-p52/p100 (Millipore), anti-IRF7 (Santa Cruz), anti-IKKα, anti-phospho-Ser176/180-IKKα, anti-phospho-Ser 866/ 870-p100, and anti-phospho-Ser471/472-IRF7 (all Cell Signaling Technology), anti-His (Sigma-Aldrich), and anti-GST (Promega). Secondary AlexaFluor488-and AlexaFluor594-coupled antibodies were purchased from Invivogen.
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