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13 protocols using 3 isobutyl 1 methylxantine

1

Analytical Standards for Bioactive Compounds

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The reference standard of PA (molecular weight: 464.6 g·mol−1; purity: HPLC ≥ 95%, #16,386) was purchased from Cayman Chemical, Ann Arbor, MI, USA. The reference standards of 20E (molecular weight 480.64 g·mol−1; purity: HPLC ≥ 95%, #89,651) and TU (molecular weight: 496.6 g·mol−1; purity: HPLC ≥ 95%, #85,781) were obtained from PhytoLab GmbH & Co. KG, Vestenbergsgreuth, Germany. Analytical grade dimethyl sulfoxide (DMSO), isopropanol, acetonitrile, methanol, cell culture medium Dulbecco’s modified Eagle’s medium/Nutrient F-12 Ham, Oil red O (ORO; 0.5% solution in isopropanol), fetal bovine serum, penicillin/streptomycin 10,000 IU/10 mg·mL−1, d-biotin (purity > 99%), d-pantothenic acid (purity > 99%), human apo-transferrin (purity > 98%), rosiglitazone (purity: HPLC > 98%), human insulin, 3-isobutyl-1-methylxantine (purity: HPLC > 99%), dexamethasone (purity: HPLC > 98%), triiodothyronine (purity > 95%), cortisol (purity > 95%), and isoproterenol hydrochloride (purity: HPLC > 98%) were obtained from Merck KGaA (Darmstadt, Germany).
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2

Metabolic Profiling of Adipocyte Differentiation

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Apo-transferrin, biotin, Bradford solution, cortisol, dexamethasone, dimethyl sulfoxide (DMSO), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), Dulbecco’s modified Eagle’s medium/nutrient F-12 Ham, fetal bovine serum, 4% formalin solution, insulin, 3-isobutyl-1-methylxantine, isopropanol, Oil red O solution (ORO), pantothenic acid, penicillin/streptomycin 10 000 IU/10 mg/ml, protease and phosphatase inhibitor cocktail, RIPA lysis buffer, rosiglitazone, triiodothyronine and 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid sodium salt (TSPA-d4; purity 99%) were supplied from Merck KGaA (Darmstadt, Germany). Pure AST (purity ≥ 95%) and QUE (purity ≥ 95%) were purchased from PhytoLab GmbH and Co. KG (Vestenbergsgreuth, Germany). Deuterated methanol (CD3OD; 99.8%) and water (D2O; 99.9%) were purchased by Deutero GmbH (Kasbellaun, Germany). All chemicals and reagents for electrophoresis, immunoblotting and real-time quantitative reverse transcription-polymerase chain reaction (RT-qPCR) were purchased from Bio-Rad Laboratories Inc. (Hercules, CA, United States).
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3

Forskolin-Induced cAMP Signaling Assay

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Forskolin (FSK), H-89 dihydrocloride (H89), Calyculin A (CalA), 3-isobutyl-1-methylxantine (IBMX), Chloroquine (ChQ), dimethyl sulfoxide (DMSO), phosphate buffered saline (PBS), Tween 20, bovine serum albumin (BSA), and skim milk powder were from Merck KGaA (Darmstadt, Germany). 8-(4-Chlorophenylthio) adenosine-3′, 5′- cyclic monophosphate (8CPT-cAMP) was from BioLog (BioLog Life Science Institute GmbH & Co. KG, Bremen, Germany).
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4

Evaluation of cAMP-Modulating Agents

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Forskolin (FSK), H-89 dihydrocloride (H89), 3-isobutyl-1-methylxantine (IBMX), dimethyl sulfoxide (DMSO), 1,6-Hexanediol, Phosphate Buffered Saline (PBS), Tween 20, Bovine Serum Albumin (BSA) and Skim Milk Powder were from (Merck KGaA, Darmstadt, Germany). 8- (4-Chlorophenylthio)-2′-O-methyladenosine-3′,5′-cyclic monophosphate, acetoxymethyl ester (8-pCPT-2′-O-Me-cAMP-AM) was from BioLog (Biolog Life Science Institute GmbH & Co. KG, Bremen, Germany). SUMOylation Inhibitor III, 2-D08 was from Calbiochem. Adenosine 3′,5′-cyclic monophosphate (cAMP) for in vitro experiments was from Sigma-Aldrich (A6885).
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5

Comparing Multipotency of hADSCs

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To compare the multipotency of FBS-cultured with hPL-cultured hADSC, cells were differentiated into adipocytes and osteocytes. For both differentiation protocols, about 5000 cells (P3) were seeded in 12-well plates and maintained in differentiation medium for 2 weeks with the medium changed every 2 days. Adipogenic differentiation medium was composed of complete medium added with 1 μM dexamethasone (Sigma Aldrich), 100 μM indomethacin (Sigma Aldrich), 100 μM 3-isobutyl-1-methylxantine (Sigma Aldrich), and 1x ITS (Sigma Aldrich). The osteogenic differentiation medium was composed of complete medium added with 50 μg/mL ascorbic acid (Sigma Aldrich), 5 mM β-glycerophosphate (Sigma Aldrich), and 100 nM dexamethasone (Sigma Aldrich). Cells cultured with the corresponding complete medium without differentiation factors were used as a negative control. After the differentiation period, hADSC were fixed with 4% paraformaldehyde for 10 min at room temperature and stained with Oil Red O (0.18%, Sigma Aldrich) for fat droplets evaluation or Alizarin Red (0.5%, Sigma Aldrich) to detect calcium deposits. Images were acquired with an optical microscope in bright field (IX81, Olympus, Iowa, USA). Experiments (adipogenic) were conducted in technical and biological triplicates, while the osteogenic one in three technical repeats and five biological repeats (5 donors)).
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6

Isolation and Differentiation of Adipocyte Progenitors

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For adipocyte-progenitor-cell isolation, SV cells from subcutaneous adipose tissue from lean C57BL/6 mice were washed with PBS containing 0.5% BSA (Sigma-Aldrich), incubated with Fc block (Bioscience) and stained with anti-CD31 (FITC, Biolegend) for 20 min at 4 °C. CD31-positive cells were removed by using MACS magnetic beads (anti-FITC, Miltenyi). Afterward, the SV cells underwent CD45 positive selection to remove hematopoietic cells using MACS magnetic beads (anti-CD45, Miltenyi). Adipocyte progenitors were sorted as CD31CD45Sca1+ cells. The cells were resuspended in DMEM/F12 medium supplemented with 10% FBS. Then they were seeded into culture dishes until they reached 70–80% confluence.
For the differentiation of adipocyte progenitors into adipocytes, cells were seeded into 6-well plates at a density of 5 × 104 cells per well in 2 ml complete DMEM/F12. When the cells reached confluence (day 0), cell medium was replaced with medium containing insulin (0.5 µg/ml, Sigma-Aldrich), 3-isobutyl-1-methylxantine (0.5 mM, Sigma-Aldrich), dexamethasone (1 µM), pioglitazone (1 µM, Sigma-Aldrich). After 48 h, medium was exchanged with complete DMEM/F12 containing insulin (0.5 µg/ml) and pioglitazone (1 µM). Differentiated adipocytes (days 8–10) were used for assays.
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7

Synthesis and Characterization of NKA Analogs

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NKA and the peptide analogs of NKA listed in Table 1 were synthesized by Genscript (Piscataway, USA) to a purity ≤95%. NKA and substance P were purchased from Sigma Aldrich, (St. Louis, USA); septide was purchased from Bachem (Bubendorf, Switzerland, EU). [3H]-Septide was custom synthesized from Quotient Bioresearch (Cardiff, UK). [125I]-NKA, and Microscint 20, were obtained from Perkin Elmer (Boston, USA). F12K medium, Geneticin (G418) and Lipofectamine 2000 were obtained from LifeTechnologies (Carlsbad, USA). Phosphate buffered saline (PBS) was from Lonza (Walkersville, MD, USA) and EDTA from Life Technologies (New York, USA). FuGENE HD Transfection Reagent was obtained from Promega (Madison, USA). The following reagents were obtained from Sigma Aldrich (St. Louis, USA): DMSO, Pluronic F-127, HEPES, bacitracin, SIGMAFAST Protease Inhibitor Tablets, bovine serum albumin (BSA), polyethileneimine (PEI), NaCl, 3-isobutyl-1-methylxantine (IBMX), and probenecid. The CRE/CREB Reporter Assay Kit, Firefly Luciferase reagent, and Renilla Luciferase reagent were purchased from BPS Bioscience (San Diego, USA).
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8

Differentiation and Stimulation of 3T3-L1 Adipocytes

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Mouse 3T3-L1 preadipocytes (ATCC) were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with penicillin-streptomycin and 10% heat-inactivated fetal calf serum (FBS) (Gibco-BRL). Cells were tested negative for mycoplasma. For differentiation to adipocytes, medium was replaced with complete DMEM containing insulin (1 μg/ml, Sigma Aldrich), 3-isobutyl-1-methylxantine (0.5 mM, Sigma Aldrich) and dexamethasone (0.25 μM, Sigma Aldrich) starting 2 days after reaching confluence (day 0). On day 3, the medium was replaced every other day with complete DMEM containing insulin (1 μg/ml). Fully differentiated 3T3-L1 adipocytes (day 8–10) were used for assays. In some experiments, 3T3-L1 adipocytes were stimulated with mouse TNF (20 ng/ml, R&D) or palmitate-BSA (250 μM, Sigma Aldrich) prior to further analysis.
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9

Differentiation of MSCs to Adipocytes and Osteoblasts

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The differentiation of MSCs in vitro towards the adipogenic and the osteogenic lineages were assayed as previously described [17 (link), 18 (link)]. Briefly, for adipocyte differentiation, MSCs were cultured for 3 weeks with adipogenic medium, containing 10−6 M dexamethasone, 10 μg/ml insulin and 100 μg/ml 3-isobutyl-1-methylxantine (Sigma, USA); for osteoblast differentiation, MSCs was cultured for 3 weeks with osteogenic medium, containing 10−7M dexamethasone, 50 μg/ml ascorbic acid and 10 mM β-glycerophosphate (Sigma, USA). Oil-red-O and von kossa dyes were respectively employed to identify adipocytes and osteoblasts.
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10

3T3-L1 Adipocyte Differentiation Protocol

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3T3-L1 cells used in the study were purchased from American Type Culture Collection and cultured in Dulbecco’s modified Eagle’s medium (DMEM) (Sigma) supplemented with 10% fetal bovine serum (FBS) and 1% streptomycin/ penicillin (growth medium, GM) at 37 °C in the humid incubator with 5% CO2. To induce differentiation, postconfluent preadipocytes were treated with hormonal inducers DMI [1 μg ml−1 INS (Roche Diagnostics GmbH, Mannheim, Germany), 0.5 mM 3-iso-butyl-1-methylxantine (Sigma), and 1 μM dexamethasone (DEX) (Sigma) in DMEM containing 10% FBS]. Three days later, 3T3-L1 cells were cultured in DMEM supplemented with 10% FBS and 1 μg ml−1 INS for 2 days. Then, 3T3-L1 cells were cultured in GM without any inducers at the final differentiation stage.
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