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18 protocols using tdtomato reporter mice

1

Imaging Cells and Pipettes in Subiculum

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To visualize cells and glass pipettes in the distal subiculum (Fig. 3C, 3D), we used a 2-photon microscope (Bergamo II Series, ThorLabs) equipped with a Ti:Sapphire laser (920 nm; Chameleon Ultra, Coherent) to enable excitation of fluorescent markers through a 20x, NA 0.95 objective lens (Olympus). To detect fluorescence from intracellular tdTomato and Alexa 488 in the pipette, we used two photo-multiplier tubes (Hamamatsu) that receive either red or green optically filtered emission, respectively. Transgenic mice were generated by crossing CaMKIIa- or PV-Cre promoter mice (Jackson Labs, stock # 005359 or 008069) with the loxP-flanked tdTomato reporter mice (Jackson Labs, stock # 007914)(Madisen et al., 2010 (link)). The CamkIIa-promoter is specific for expression in principal cells (Tsien et al., 1996 (link)), while the PV-promoter targets interneurons expressing parvalbumin (Hippenmeyer et al., 2005 (link)).
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2

Mouse Strain Characterization Protocol

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All mouse strains used have previously been described. PV::cre, GFP, and tdTomato reporter mice were obtained from Jackson Labs (stock numbers 008069, 007906, and 007914, respectively). TRPV1::cre mice were made by A.I.B. (Cavanaugh et al., 2011b (link)).
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3

Aplnr-driven Cre reporter mice

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Aplnr-driven Cre recombinase mice [19 (link)] were obtained from Shanghai Biomodels (Shanghai, China) and crossed to tdTomato reporter mice ([36 (link)]; Jackson Labs stock number 7909) obtained from the Jackson Laboratory (Bar Harbor, ME). Mice heterozygous for both the Aplnr-driven Cre and tdTomato reporter alleles were used for histological analysis.
All reporter mouse experiments were performed in accordance with the NIH Guide for the Care and Use of Laboratory animals, and protocols were approved by the Mispro Biotech Services institutional animal care and use committee (IACUC).
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4

Genetic Manipulation and Housing of Mice

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All mouse care and experimental procedures were approved by the institutional animal care research advisory committee of the Albert Einstein College of Medicine. Mice used in these experiments included ChAT-IRES-Cre [34 (link)] and tdTomato reporter mice (The Jackson Laboratory). 2-month-old mice on a mixed C57BL6/129SVJ background were used for all experiments. Animals were housed in groups in cages under conditions of controlled temperature (22°C) with a 12:12 h light dark cycle and fed a standard chow diet with ad libitum access to water.
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5

Genetic Mouse Models for YAP/TAZ Study

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C57BL/6J mice were obtained from Jackson laboratories and housed in the Boston University Animal Science Center on a 12-hour light-dark cycle with access to food and water ad libitum. Prox1-Cre-ERT2 mice and TdTomato reporter mice were obtained from The Jackson Laboratory (strain #022075 and strain #007914, respectively). The YAPloxP/loxP mice and Wwtr1/TAZloxP/loxP mice used to generate the YAP/TAZ△LEC mice reported here were provided by Dr. Jeffrey Wrana (LTRI institute) (Jackson Laboratory Strain #030532). Our study examined both male and female animals with the sex of the mice randomized across experimental groups. Similar findings are reported for both sexes. At time of sacrifice, mice were ethically euthanized using isoflurane and inferior vena cava incision. All methods were carried out in accordance with relevant IACUC guidelines and regulations and are reported in accordance with ARRIVE guidelines. All animal experiments were performed in compliance with approved Boston University animal protocols PROTO201800710_TR01 and PROTO201800057_TR01.
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6

Transgenic Mouse Lines for Lineage Tracing

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Sox2-creERT2 mice9 (link), hGFAP-cre mice10 (link) and tdTomato reporter mice11 (link) were obtained from the Jackson Laboratory. Nestin-GFP mice were used as previously described12 (link). Genotyping was performed by PCR analysis using genomic DNA from ear biopsies. Primers for Cre13 (link) and tdTomato14 (link) have been published previously.
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7

Copper Sulfate Effects on Lineage Tracing

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Brain sections from 18 months old and 14 days post LPS injection C57BL/6 mice were treated with varying concentrations of copper sulfate for 1.5 h. Sections were then performed with immunofluorescence staining. To assess the effects of copper sulfate treatment on the fluorescence of RFP in a lineage tracing system, Sox10-cre/ERT2 and tdTomato reporter mice (Jackson Laboratories, Maine, ME, USA) were cross-bred. Tamoxifen was injected into the offspring, using a dosage of 1 mg per mouse per day for 3 days. The sample brains were harvested and sectioned using the vibratome method described above.
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8

Mouse Housing and Breeding Protocol

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All mice used for breeding and experiments in this study were housed in a light-dark (12 h on/off; lights on at 7:00 AM) and temperature-controlled environment with food and water available ad libitum in the KAIST facilities. Npy-hrGFP mice were obtained from the Jackson laboratory (#006417). For some patch clamp experiments GIRK2 KO mice [41 (link)], used with the permission from Dr. Markus Stoffel (ETH Zurich), were crossed with Npy-hrGFP mice. Agrp-ires-Cre mice (Jackson laboratory, #012899) were crossed with tdTomato reporter mice (Jackson laboratory, #007914), GIRK1flox/flox mice [22 (link)] or GIRK2flox/flox mice [23 (link)] for FISH, ISH, IHC, and in vivo metabolic experiments. Mice were fed standard NCD (Teklad global 18% protein 2018S, ENVIGO).
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9

UCP1-TRAP Mice for Thermogenesis

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Animal experiments were performed according to procedures approved by the Dana-Farber Cancer Institute IACUC. Myh11-Cre (stock #007742), Myh11-Cre/ERT2 (stock #019079), tdTomato reporter mice (stock #007914), and ROSAmT/mG reporter mice (stock #007676) were obtained from Jackson Laboratories. The generation of TRAP and Ucp1-Cre transgenic mice is described in detail in the Supplemental Experimental Procedures. UCP1-TRAP breeding pairs were housed at 30°C and litters were weaned to room temperature at 3 weeks. Unless otherwise stated, for cold exposure experiments 4 week-old female UCP1-TRAP mice were individually housed at 4°C for two weeks.
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10

Mouse Strain Characterization Protocol

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All mouse strains used have previously been described. PV::cre, GFP, and tdTomato reporter mice were obtained from Jackson Labs (stock numbers 008069, 007906, and 007914, respectively). TRPV1::cre mice were made by A.I.B. (Cavanaugh et al., 2011b (link)).
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