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9 protocols using sa00001 1 2

1

Western Blot Analysis of Autophagy Markers

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The cells were washed with ice-pre-cooled PBS and added with 200 uL RIPA lysate (AWB0136, Abiowell). The total protein was extracted after ultrasonic crushing for 1.5 min. Protein concentrations were determined using the BCA method. Protein samples (200 μg) were separated by SDS-PAGE (12%, AWT0047, Abiowell). Then, proteins were transferred to a polyvinylidene difluoride membrane, which was activated with methanol and blocked with skim milk powder (5%, AWB0004, Abiowell). Membrane was incubated with antibodies, which were included anti-progesterone receptor A (PR-A, ab32085, 1:5000, Abcam, UK), anti-LC3II/I (#43566, 1:1000, CST, USA), anti-Beclin1 (11306-1-AP, 1:1000, Proteintech, USA), anti-p62 (18420-1AP, 1:4000, Proteintech, USA), anti-CytC (10993-1-AP, 1:4000, Proteintech, USA) and anti-β-actin (66009-1-Ig, 1:5000, Proteintech, USA). Then, it was incubated with secondary anti-IgG (SA00001-1/2, 1:6000/5000, Proteintech, USA) at 37°C for 90 min. ECL Plus hypersensitive luminescence solution (AWB0005, Abiowell) was used for visualization, and software (ChemiScope6100, CLINX) was used for imaging analysis.
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2

Western Blot Analysis of RORα, STAT1, and STAT3

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A total of 30 μg protein pool was resolved by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and subsequently electro-transferred to polyvinylidene fluoride membranes (Millipore). The membrane was soaked at RT for one to two hours, followed by overnight incubation at 4 °C with the following primary antibodies (1:1000 dilution): rabbit anti-RORα polyclonal antibody (Abclonal, A6971), rabbit anti-STAT1 monoclonal antibody (Cell Signaling Technology, #14994), rabbit phospho-STAT1 monoclonal antibody (Cell Signaling Technology, #7649), mouse anti-STAT3 monoclonal antibody (Cell Signaling Technology, #9193), or rabbit antibody monoclonal phospho-STAT3 (Cell Signaling Technology, #9145). After washed in TBS-T three times for 5 min each, corresponding anti-rabbit/mouse HRP-conjugated secondary antibodies (Proteintech, SA00001-1/2, 1:10000) were added, with incubation at RT for one hour. The immunoblot bands were detected via enhanced chemiluminescence (ECL) western blot detection kit (Share-bio Biotechnology, Shanghai, China). The signal intensities were analyzed by Image J software. All blots derive from the same experiment and were processed in parallel.
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3

Quantitative Protein Expression Analysis

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Cells were added with RIPA lysate (R0020; Solarbio) and protease inhibitor PMSF (P0100; Solarbio) with a final concentration of 1 mM, lysed and centrifuged at 15,000 x g for 10 min at 4˚C to extract the cell protein. The protein concentration was quantified by BCA method, and the final protein concentration was adjusted. The sample protein concentration was 5-10 µg/µl with 10 µl applied to each well, and the gel was electrophoresed using an 8% SDS-PAGE separation gel. After electrophoresis, the protein was transferred to the PVDF membrane by a semi-wet transfer method. 5% Skim milk powder was blocked for 1 h, and then Toll-like receptor (TLR)4 (1:2,000, 66350-1-Ig; Proteintech), TLR7 (1:500, 17232-1-AP; Proteintech), GAPDH (1:5,000, 60004-1-Ig; Proteintech) were added. The primary antibody dilution solution was left at 4˚C overnight, then it was washed three times with 0.1% PBST. The corresponding HRP-labeled goat anti-rabbit (mouse) immune secondary antibody (1:3,000, SA00001-1/2; Proteintech) was added, then incubated at room temperature for 1 h. Then washed 3 times with 0.1% PBST. ECL chemiluminescence solution (PE0010; Solarbio) was added, after that, it was developed, fixed and images were taken in a dark room (LAS 4000; ImageQuant) for recording. ImageJ software was used for image analysis.
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4

Protein Expression Analysis of HOKs Treated with Arecoline

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The total protein was extracted from HOKs treated with different concentrations of arecoline using SDS lysis buffer (P0013G; Beyotime). The total protein concentration was detected using Pierce™ BCA Protein Assay Kit (23225; Thermo Fisher Scientific). A total of 40 µg protein was added to 10% polyacrylamide gel and transferred to polyvinylidene fluoride (PVDF) membranes. The membranes were blocked with 5% skim milk for 1 h at room temperature. After PBST washing three times, the membranes were incubated with primary antibodies overnight at 4° overnight: p16 (1:2000, ab108349, Abcam), p21 (1:2000, 2946; Cell Signaling Technology), p53 (1:1000, 48818; Cell Signaling Technology), transforming growth factorβ1 (TGF-β1) (1:1000, ab215715; Abcam), and GAPDH (1:1000, 5174T, Cell Signaling Technology). Then, the membranes were incubated with the corresponding horseradish peroxidase-conjugated secondary antibodies (anti-Rabbit/mouse 1:5000∼10000, SA00001-1/2; Proteintech) for 1 h at room temperature. The membranes were developed using SuperSignal™ West Pico PLUS chemiluminescent substrate (34580; Thermo Fisher Scientific) and detected by a chemiluminescent imaging system (MiniChemi 610; Sage Creation, Beijing, China). and analyzed using the ImageJ 5.0 version software.
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5

Quantification of Protein Expression

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For total protein extraction, the cells were washed with PBS, lysed in lysis buffer (87787, Thermo Fisher Scientific, U.S.A.) following the addition of a protease inhibitor, incubated on ice for 5 min, and centrifuged at 13000× g for 10 min at 4°C. Protein concentration was determined with a bicinchoninic acid assay (BCA) kit (P0012, Beyotime). We separated proteins using 10% SDS/PAGE and transferred them to PVDF membranes. The membranes were blocked with 5% nonfat milk for 1 h at room temperature and incubated with primary antibodies against RIP3 (1:1000; ab62344, Abcam), pRIP3 (1:1000; 93654, CST), MLKL (1:1000; ab184718, Abcam), pMLKL (1:1000; 91689, CST), peroxisome proliferator-activated receptor γ (PPARγ; 1:1000; ab178860, Abcam), vascular endothelial growth factor-A (VEGFA; 1:1000; 19003-1-AP, Proteintech), and glyceraldehyde 3-phosphate dehydrogenase (GAPDH; 1:50000; 60004-1, Proteintech) as an internal control at 4°C overnight. After being extensively washed with Tris-buffered saline with Tween 20 (TBST), the membranes were incubated with anti-rabbit/mouse secondary antibodies (1:10000; SA00001-1/2, Proteintech) for 1 h at room temperature. Protein was developed with ECL reagent (Millipore; Sigma–Aldrich, Germany) and visualized using a ChemiDoc MP Imager (Bio-Rad Laboratories, U.S.A.). The density of bands was determined by ImageJ (version 1.53c).
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6

Western Blot Analysis of Cellular Proteins

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Total cellular proteins were extracted using lysis buffer (#KGB5303-100; KeyGEN BioTECH, Nanjing, China) which contains protease inhibitors, phosphatase inhibitors, and phenylmethyl-sulfonyl fluoride. Protein concentrations were measured by bicinchoninic acid assay kit (#P0011; Beyotime Biotechnology, Shanghai, China), followed by separation of protein samples by 10% or 12% SDS polyacrylamide gel electrophoresis. The proteins were then transferred to nitrocellulose membranes (#66485; Pall Corporation, Port Washington, NY, USA), which were then blocked with 5% skim milk powder. The membranes were incubated with antibodies overnight at 4 °C, which are ACSL4 (1:1000; #A20414; ABclonal, Wuhan, China), PRL (1:800; #A1618; Abclonal), IGFBP1 (1:1000; #A11109; Abclonal), FOXO1 (1:1000; #18592-1-AP; Proteintech, Wuhan, China), HOXA10 (1:1000; #26497-1-AP; Proteintech), CPT1A (1:1000; #A5307; Abclonal), CPT2 (1:1000; #A12426; Abclonal). The membranes were washed and then incubated with horseradish peroxidase-conjugated secondary antibodies (1:4000; #SA00001-1/2; Proteintech) for 1 h at room temperature. The visualization and analysis of bands were performed using chemiluminescent detection reagents (#180-5001; Tanon, Shanghai, China) and an image detection system (Tanon).
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7

Western Blot Analysis of Inflammatory Markers

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Western blot analysis was conducted following established protocols. In brief, 40 µg of protein samples extracted from BV2 cells were transferred onto a PVDF membrane (Millipore). Subsequently, the membrane was blocked with 5% skim milk for 2 h at room temperature, followed by incubation with primary antibodies against ABCA1 (Abcam ab307534), iNOS (Abcam ab210823), Arg1 (Proteintech 66129-1-Ig), IL-1β (Abcam ab156791), TNF-α (Abcam ab1793) and β-tubulin (Proteintech 66240-1-Ig) at 4 °C overnight, with a dilution ratio of 1:1000. After primary antibody incubation, the blots were exposed to the corresponding secondary antibodies (Proteintech SA00001-1/2, 1:1000) for 1 h at room temperature. Protein bands were visualized using an ECL kit (GE Healthcare), and quantification of blot bands was performed using ImageJ version 1.46 (Rawak Software, Inc., Munich, Germany).
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8

Quantifying SIRT1 and MMP9 Protein Levels

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RIPA lysate (Solarbio) and protease inhibitor PMSF (Solarbio) with a final concentration of 1 mM were added into the cells, and then, the total protein of the cells was extracted by centrifugation. The total protein concentration was tested by the BCA method, the final loading protein concentration was adjusted to 5–10 μg/μl, the sample was loaded, and 10% SDS-PAGE separation gel was applied for gel electrophoresis. The target protein was transferred to PVDF membrane by the semiwet transfer method, sealed with 5% skimmed milk powder for 1 h, and then added with SIRT1 (60303-1-Ig, Proteintech, 1 : 4000) and MMP9 (10375-2-AP, Proteintech, 1 : 1000) primary antibody diluent at 4°C overnight. After being washed with 0.1% PBST buffer for 3 times, the corresponding HRP-labeled secondary antibody (SA00001-1/2, Proteintech, 1 : 5000) was added and incubated at room temperature for 1 h and then washed with 0.1% PBST buffer for 3 times. ECL chemiluminescence solution (Solarbio) was evenly dripped on PVDF membrane, and the expression of protein was analyzed by ImageJ.
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9

Western Blot Analysis of TLR3 and NF-kBP65

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The proper amount of lysate (R0020, Solarbio) was added to the cells of the control and treatment groups to extract the total proteins by centrifugation after cell lysis. The BCA kit (P0012S, Biyuntian) was used to detect the protein concentration. The total proteins were gelled in an SDS-PAGE gel, and the target protein was transferred to the PVDF membrane by the semiwet transfer method. TLR3 (1 : 2000, ab62566, Abcam), NF-kBP65 (1 : 2000, ab16502, Abcam), and GAPDH (1 : 5000, ab8245, Abcam) antibody dilutions were added after BSA closure, which was kept at 4°C overnight. Then, it was washed with 0.1% PBST 3 times. The corresponding sheep anti-rabbit/mouse immune second antibody (1 : 2000, SA00001-1/2, Proteintech) was added to incubate for 1 h at room temperature. ECL chemiluminescence solution (P0018FS, Biyuntian) was added after washing 3 times. The image was developed, fixed, and recorded in a dark room, and the processing software ImageJ 1.52 was used for analysis.
http://www.ptgcn.com/Products/HRP-conjugated-Affinipure-Goat-Anti-Mouse-IgG-H-L--secondary-antibody.htm.
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