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10 protocols using bc0700

1

Quantification of Antioxidants and Metabolites

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A commercial kit (BC1230, Solarbio) was applied to determine AsA content based on the oxidation rate of AsA catalyzed by AAO (ascorbic acid oxidase) (spectrophotometric measurement at OD265 nm). A commercial kit (BC1240, Solarbio) was applied to determine DHA content based on the production rate of AsA from DHA by DTT (1,4-dithiothreitol) (spectrophotometric measurement at OD265 nm). A commercial kit (BC1170, Solarbio) was applied to determine GSH content based on spectrophotometric measurement of the product from the reaction between GSH and DTNB (5,5’-dithiobis-2-nitrobenoic acid) (OD265 nm). A commercial kit (BC1180, Solarbio) was applied to determine GSSG content based on the production rate of GSH (measurement of OD265 nm for the reaction between GSH and DTNB) from GSSG catalyzed by GR (GSH reductase). A commercial kit (BC0290, Solarbio) was applied to determine proline content based on spectrophotometric measurement of the product from the reaction between proline and ninhydrin (OD520 nm). A commercial kit (BC0035, Solarbio) was applied to determine plant soluble sugar content based on anthrone colorimetric method (OD620 nm). A commercial kit (BC0700, Solarbio) was applied to determine starch content based on the separation of starch with 80% ethanol and acid hydrolyzation to glucose, followed by anthrone colorimetric method (OD620 nm) (Chen et al., 2020b (link)).
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2

Characterizing Starch Accumulation and Senescence in lses1 Leaves

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The phenotype of excessive starch and premature senescence of lses1 leaves appeared from three-leaf stage to tillering stage. Therefore, the leaves of WT and lses1 at six-leaf stage which is the transition period between seedling stage and tillering stage were used for the following analyses. The second leaf from the top of WT and lses1 seedlings at the sixth leaf stage was harvested at the end of the night (6:00) and at the end of the day (18:00), frozen in liquid nitrogen and stored at − 80 °C. Approximately 0.2 g frozen leaf samples were ground using a mortar and pestle under cryogenic conditions. The leaf powder was measured by using a starch content assay kit (BC0700, Solarbio, China) according to the manufacturer’s assay procedure. At the same time, the first, second, and third leaves from the top of the WT and lses1 seedlings were sampled and stained with I2-KI solution as described by Hagen et al. (2008) with minor modifications [20 ]. The leaves were incubated in an acetone/ethanol (1:1, v/v) mixture and placed at room temperature for 24-36 h until the chlorophyll was removed. After bleaching, the leaves were put in I2-KI solution for approximately 20 min and then removed and placed on a table. Photographs were taken and saved with a camera. Three biological replicates of each sample were performed.
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3

Measuring Chlorophyll and Starch in Infected Leaves

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Mature leaves of ~3-week-old plants were infected with Pst DC3000 and were then ground to powder in liquid nitrogen. After that, chlorophyll was extracted in the dark with 1 ml of ethanol (95%) at 4 °C for 24 h. The precipitate was washed three to five times with 95% ethanol until it was completely white. The supernatant was transferred to a new tube, and the content of chlorophyll was calculated using spectrophotometric absorbance (A) at light wavelengths of 665 and 649 nm, with 95% ethanol as a control74 . The chlorophyll content is shown as milligrams of chlorophyll per gram of freshly infected leaves
Chlorophyll a (mg g−1) = 13.95 × A665 − 6.88 × A649Chlorophyll b (mg g−1) = 24.96 × A649 − 7.32 × A665.The content of starch was measured from leaves inoculated with Pst DC3000 (~150 mg of fresh weight). The leaves were ground to powder in liquid nitrogen and incubated at 80 °C for 30 min in 80% ethanol to separate the soluble sugar from the starch. The total starch in each sample was then quantified using a kit from Solarbio (BC0700, China) according to the manual.
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4

Comprehensive Algal Biomass Analysis

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Algal cells were first harvested by centrifugation at 8,000 rpm for 10 min. After being washed twice with distilled water, they were lyophilized using a lyophilizer (FD-1A-50, BiLon, China). The total biomass concentration in each culture was measured by the gravimetric method. The glucose concentration was measured by the 3,5-dinitrosalicylic acid (DNS) method. The protein content was measured according to the method reported by Tian et al. (2020) (link). Lipid extraction and quantification were performed according to the methods reported by Wang et al. (2020) (link). For the measurement of starch content, the lyophilized cells were first ground for 10 min using a mortar and pestle and then measured using a starch detection kit (BC0700, Solarbio, China) according to the manufacturer’s instructions. The morphology of C. pyrenoidosa was observed using a microscope (Mshot ML31, China). For the analysis of cell size, more than 300 cells were randomly chosen and their diameters were measured using a microscope (MSHOT ML31, China). The size distribution of cells cultured at different temperatures was analyzed using Origin 9 (OriginLab, United States). The zeta potential of the cultures on the 5th day was measured using a Malvern Zetasizer Nano ZS90.
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5

Mitochondrial Function and Carbohydrate Metabolism in Anther Development

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Anthers of J4A and J4B were collected (with three biological replicates) at the pollen mother cell stage (PMC; preabortion), meiosis stage (Me; abortion stage), and uninucleate stage (Uni; postabortion). A plant MRCC IV enzyme-linked immunosorbent assay (ELISA) kit, MRCC V ELISA kit, RP ELISA kit, and ATP kit (Shanghai Enzyme-Linked Biotechnology Co., Ltd., Shanghai, China) were used to measure mitochondrial function by the double antibody sandwich method [60 ]. The contents of starch, sucrose, soluble sugar, and fructose were determined (by visible spectrophotometry) with a plant sucrose content test kit (BC2465 Solarbio Technology Co., Ltd., Beijing, China), starch content test kit (BC0700, Solarbio Technology Co., Ltd., Beijing, China), soluble sugar content test kit (BC0030, Solarbio Technology Co., Ltd., Beijing, China), and fructose content test kit (BC2450 Solarbio Technology Co., Ltd., Beijing, China), respectively. The specific operation steps and calculation methods were conducted according to the kit instructions.
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6

Starch and Soluble Sugar Quantification

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Sterile explant materials at the callus stage, the PLB mass stage, the mixture of shoots and PLBs stage and the shoots stage were selected for the determination of starch content. The plant soluble sugar content assay kit (Solarbio, BC0030) and starch content assay kit (Solarbio, BC0700) used visible spectrophotometry for content determination. We weighed 0.1 g of the sample and referred to the instructions of the corresponding kit for the specific operation method to determine the content. Three biological replicates were set for each treatment.
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7

Duckweed Starch and Enzyme Assays

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Duckweed plants were sampled after designed time at about 4:00 p.m. in the day time, about 0.1 g fresh weight samples were ground in liquid nitrogen with a mortar and pestle. The starch was then extracted and measured using the starch extraction and measurement kit according to the manufacturer’s protocol (BC0700, Solarbio Biological &Technology Co. Ltd., Beijing, China). For the analysis of PEPC and MDH enzyme activity, we carried out according to the procotol BC2190 and BC1040, respectively (Solarbio Biological &Technology Co. Ltd., Beijing, China). The determination of the starch content and enzyme activity was done in Thermo Multiskan GO (Thermo, USA).
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8

Quantifying Starch and Amylose in Lotus Rhizome

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Extraction of total starch and amylose content refers to the anthrone-sulfuric acid colorimetry method with slight modification [62 ]. The lotus rhizome samples stored in the refrigerator at −80 °C were ground thoroughly, and the powder obtained from each treatment was weighed into three parts, each part 0.03 g, to determine the total starch content of the lotus rhizome. The total starch content was determined by anthrone colorimetry using a starch content kit (Beijing Solarbio Science & Technology Co., Ltd., No. BC0700 Beijing, China). Lotus rhizome samples were fixed at 105 °C for 30 min, dried at 80 °C to constant weight, thoroughly ground the lotus rhizome sample and three servings weighed for each treatment, each part 0.01 g, and then used to determine amylose content. The content of amylose was determined by iodine colorimetry using an amylose content kit (Beijing Solarbio Science & Technology Co., Ltd., No. BC4260 Beijing, China). Amylopectin content = total starch content − amylose content.
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9

Starch, Sugar, and Protein Quantification

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A starch extraction and measurement kit was used to extract and measure the starch content, according to the manufacturer’s protocol (BC0700, Solarbio Biological & Technology Co. Ltd., Beijing, China). The total sugar was extracted and measured using a total sugar extraction and measurement kit, according to the manufacturer’s protocol (BC2715, Solarbio Biological & Technology Co. Ltd., Beijing, China). Soluble protein content extraction was carried out using 30 mM Tris-HCl (pH 7.0), and was measured using the manufacturer’s protocol (P0006C, Beyotime Biotechnology Co. Ltd., Shanghai, China).
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10

Kenaf Anther Hormones and Metabolites

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The contents of indoleacetic acid (IAA), gibberellic acid (GA), and abscisic acid (ABA) in kenaf anthers pretreated with different concentrations of 5-azaC were measured via enzyme-linked immunosorbent assay (ELISA). Endogenous hormones were extracted according to the method proposed by Zur et al. (2015) (link). Plant hormone ELISA kits purchased from Zoonbio Biotechnology Co., Ltd. (Nanjing, China) were used to measure the contents of IAA, GA, and ABA according to the kits’ protocols (ELISA kits BH100, BH101, and BH102). Similarly, the adenosine triphosphate (ATP), starch and soluble sugar contents were determined via kits (Solarbio Science & Technology, Beijing, China, kits BC0300, BC0700, and BC0030).
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